Protein–RNA interactions for Protein: Q8IX90

SKA3, Spindle and kinetochore-associated protein 3, humanhuman

Predictions only

Length 412 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3Q8IX90 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.09□□□□□ -2.07
SKA3Q8IX90 MIR21-201ENST00000362134 72 ntBASIC2.09□□□□□ -2.07
SKA3Q8IX90 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
SKA3Q8IX90 SNORD116-9-201ENST00000384000 95 ntBASIC2.09□□□□□ -2.07
SKA3Q8IX90 RNU6-74P-201ENST00000384235 107 ntBASIC2.09□□□□□ -2.07
SKA3Q8IX90 SNORD116-3-201ENST00000384287 95 ntBASIC2.09□□□□□ -2.07
SKA3Q8IX90 SNORD116-1-201ENST00000384335 95 ntBASIC2.09□□□□□ -2.07
SKA3Q8IX90 SNORD116-7-201ENST00000384404 95 ntBASIC2.09□□□□□ -2.07
SKA3Q8IX90 SNORA51.11-201ENST00000384442 131 ntBASIC2.09□□□□□ -2.07
SKA3Q8IX90 SNORD116-5-201ENST00000384462 95 ntBASIC2.09□□□□□ -2.07
SKA3Q8IX90 RNU6-456P-201ENST00000384493 107 ntBASIC2.09□□□□□ -2.07
SKA3Q8IX90 RNU6-19P-201ENST00000384718 107 ntBASIC2.09□□□□□ -2.07
SKA3Q8IX90 Y_RNA.576-201ENST00000384781 102 ntBASIC2.09□□□□□ -2.07
SKA3Q8IX90 MIR23A-201ENST00000385245 73 ntBASIC2.09□□□□□ -2.07
SKA3Q8IX90 MIR147B-201ENST00000390185 80 ntBASIC2.09□□□□□ -2.07
SKA3Q8IX90 RNU6-1328P-201ENST00000410938 106 ntBASIC2.09□□□□□ -2.07
SKA3Q8IX90 RNU6-387P-201ENST00000411331 105 ntBASIC2.09□□□□□ -2.07
SKA3Q8IX90 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.09□□□□□ -2.07
SKA3Q8IX90 EEF1A1P40-201ENST00000412883 573 ntBASIC2.09□□□□□ -2.07
SKA3Q8IX90 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.09□□□□□ -2.07
SKA3Q8IX90 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.09□□□□□ -2.07
SKA3Q8IX90 MTCO1P19-201ENST00000443487 500 ntBASIC2.09□□□□□ -2.07
SKA3Q8IX90 MTND2P22-201ENST00000444325 1033 ntBASIC2.09□□□□□ -2.07
SKA3Q8IX90 AL513328.1-201ENST00000446460 224 ntBASIC2.09□□□□□ -2.07
SKA3Q8IX90 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.09□□□□□ -2.07
SKA3Q8IX90 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.09□□□□□ -2.07
SKA3Q8IX90 AC117522.2-201ENST00000510049 657 ntBASIC2.09□□□□□ -2.07
SKA3Q8IX90 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.09□□□□□ -2.07
SKA3Q8IX90 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
SKA3Q8IX90 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.09□□□□□ -2.07
SKA3Q8IX90 AC109329.2-201ENST00000519658 482 ntBASIC2.09□□□□□ -2.07
SKA3Q8IX90 AC021269.2-201ENST00000532318 330 ntBASIC2.09□□□□□ -2.07
SKA3Q8IX90 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.09□□□□□ -2.07
SKA3Q8IX90 MIR4528-201ENST00000577763 90 ntBASIC2.09□□□□□ -2.07
SKA3Q8IX90 AC119751.7-201ENST00000600494 245 ntBASIC2.09□□□□□ -2.07
SKA3Q8IX90 Z84480.1-201ENST00000605131 311 ntBASIC2.09□□□□□ -2.07
SKA3Q8IX90 AC046143.2-201ENST00000609789 160 ntBASIC2.09□□□□□ -2.07
SKA3Q8IX90 MIR6840-201ENST00000611937 71 ntBASIC2.09□□□□□ -2.07
SKA3Q8IX90 DLEU2_1.1-201ENST00000612089 120 ntBASIC2.09□□□□□ -2.07
SKA3Q8IX90 DLEU2_1.2-201ENST00000614667 120 ntBASIC2.09□□□□□ -2.07
SKA3Q8IX90 AC072046.2-201ENST00000618366 268 ntBASIC2.09□□□□□ -2.07
SKA3Q8IX90 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.09□□□□□ -2.07
SKA3Q8IX90 MIR1291-201ENST00000627649 87 ntBASIC2.09□□□□□ -2.07
SKA3Q8IX90 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
SKA3Q8IX90 AC016717.2-201ENST00000609089 5141 ntBASIC2.09□□□□□ -2.08
SKA3Q8IX90 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.09□□□□□ -2.08
SKA3Q8IX90 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.09□□□□□ -2.08
SKA3Q8IX90 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.09□□□□□ -2.08
SKA3Q8IX90 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.08
SKA3Q8IX90 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
SKA3Q8IX90 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
SKA3Q8IX90 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
SKA3Q8IX90 MIR412-201ENST00000362142 91 ntBASIC2.08□□□□□ -2.08
SKA3Q8IX90 MIRLET7G-201ENST00000362280 84 ntBASIC2.08□□□□□ -2.08
SKA3Q8IX90 RNU6-1097P-201ENST00000363586 107 ntBASIC2.08□□□□□ -2.08
SKA3Q8IX90 RNA5SP37-201ENST00000365420 130 ntBASIC2.08□□□□□ -2.08
SKA3Q8IX90 Y_RNA.359-201ENST00000365498 102 ntBASIC2.08□□□□□ -2.08
SKA3Q8IX90 MIR518D-201ENST00000385014 87 ntBASIC2.08□□□□□ -2.08
SKA3Q8IX90 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
SKA3Q8IX90 Y_RNA.623-201ENST00000411128 95 ntBASIC2.08□□□□□ -2.08
SKA3Q8IX90 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.08□□□□□ -2.08
SKA3Q8IX90 PIGFP2-201ENST00000421400 651 ntBASIC2.08□□□□□ -2.08
SKA3Q8IX90 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.08□□□□□ -2.08
SKA3Q8IX90 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.08□□□□□ -2.08
SKA3Q8IX90 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.08□□□□□ -2.08
SKA3Q8IX90 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.08□□□□□ -2.08
SKA3Q8IX90 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.08□□□□□ -2.08
SKA3Q8IX90 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.08□□□□□ -2.08
SKA3Q8IX90 AC104058.1-201ENST00000448028 297 ntBASIC2.08□□□□□ -2.08
SKA3Q8IX90 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.08□□□□□ -2.08
SKA3Q8IX90 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.08□□□□□ -2.08
SKA3Q8IX90 C1DP4-201ENST00000455429 424 ntBASIC2.08□□□□□ -2.08
SKA3Q8IX90 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC2.08□□□□□ -2.08
SKA3Q8IX90 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
SKA3Q8IX90 RN7SL636P-201ENST00000497504 294 ntBASIC2.08□□□□□ -2.08
SKA3Q8IX90 MTND4P2-201ENST00000507767 1203 ntBASIC2.08□□□□□ -2.08
SKA3Q8IX90 AC234781.5-201ENST00000508429 271 ntBASIC2.08□□□□□ -2.08
SKA3Q8IX90 SNORD27.1-201ENST00000516319 72 ntBASIC2.08□□□□□ -2.08
SKA3Q8IX90 BTF3P12-201ENST00000519620 469 ntBASIC2.08□□□□□ -2.08
SKA3Q8IX90 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC2.08□□□□□ -2.08
SKA3Q8IX90 SUB1P2-201ENST00000556401 297 ntBASIC2.08□□□□□ -2.08
SKA3Q8IX90 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.08□□□□□ -2.08
SKA3Q8IX90 AC006362.1-201ENST00000567392 174 ntBASIC2.08□□□□□ -2.08
SKA3Q8IX90 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.08□□□□□ -2.08
SKA3Q8IX90 AL670379.4-201ENST00000605279 254 ntBASIC2.08□□□□□ -2.08
SKA3Q8IX90 AC067747.1-201ENST00000608026 250 ntBASIC2.08□□□□□ -2.08
SKA3Q8IX90 AC005332.10-201ENST00000612725 619 ntBASIC2.08□□□□□ -2.08
SKA3Q8IX90 AC245884.12-201ENST00000615364 59 ntBASIC2.08□□□□□ -2.08
SKA3Q8IX90 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.08□□□□□ -2.08
SKA3Q8IX90 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.08□□□□□ -2.08
SKA3Q8IX90 U6.114-201ENST00000636407 96 ntBASIC2.08□□□□□ -2.08
SKA3Q8IX90 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.08□□□□□ -2.08
SKA3Q8IX90 AL390237.1-201ENST00000404226 1415 ntBASIC2.08□□□□□ -2.08
SKA3Q8IX90 ZNF720P1-201ENST00000562403 1939 ntBASIC2.07□□□□□ -2.08
SKA3Q8IX90 MTND5P17-201ENST00000418405 1603 ntBASIC2.07□□□□□ -2.08
SKA3Q8IX90 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
SKA3Q8IX90 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.07□□□□□ -2.08
SKA3Q8IX90 RNU6-181P-201ENST00000363225 107 ntBASIC2.07□□□□□ -2.08
SKA3Q8IX90 SNORD114-30-201ENST00000364448 72 ntBASIC2.07□□□□□ -2.08
SKA3Q8IX90 SNORD14B-201ENST00000364533 90 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 197.7 ms