Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 RNU2-52P-201ENST00000410680 190 ntBASIC2.77□□□□□ -1.97
PRPF39Q86UA1 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.77□□□□□ -1.97
PRPF39Q86UA1 AL031779.1-201ENST00000415663 330 ntBASIC2.77□□□□□ -1.97
PRPF39Q86UA1 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.77□□□□□ -1.97
PRPF39Q86UA1 AC000111.3-201ENST00000433478 193 ntBASIC2.77□□□□□ -1.97
PRPF39Q86UA1 MTND2P22-201ENST00000444325 1033 ntBASIC2.77□□□□□ -1.97
PRPF39Q86UA1 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.77□□□□□ -1.97
PRPF39Q86UA1 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.77□□□□□ -1.97
PRPF39Q86UA1 AL360271.2-201ENST00000447710 161 ntBASIC2.77□□□□□ -1.97
PRPF39Q86UA1 MTND1P18-201ENST00000448191 573 ntBASIC2.77□□□□□ -1.97
PRPF39Q86UA1 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.77□□□□□ -1.97
PRPF39Q86UA1 OFD1P4Y-201ENST00000455273 1179 ntBASIC2.77□□□□□ -1.97
PRPF39Q86UA1 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.77□□□□□ -1.97
PRPF39Q86UA1 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
PRPF39Q86UA1 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.77□□□□□ -1.97
PRPF39Q86UA1 AC098799.2-201ENST00000509466 868 ntBASIC2.77□□□□□ -1.97
PRPF39Q86UA1 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.77□□□□□ -1.97
PRPF39Q86UA1 AC027807.1-201ENST00000559921 996 ntBASIC2.77□□□□□ -1.97
PRPF39Q86UA1 AC023824.2-201ENST00000566185 400 ntBASIC2.77□□□□□ -1.97
PRPF39Q86UA1 AC009163.5-201ENST00000575421 637 ntBASIC2.77□□□□□ -1.97
PRPF39Q86UA1 MIR4775-201ENST00000581168 75 ntBASIC2.77□□□□□ -1.97
PRPF39Q86UA1 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.77□□□□□ -1.97
PRPF39Q86UA1 AC008945.2-201ENST00000606056 604 ntBASIC2.77□□□□□ -1.97
PRPF39Q86UA1 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.77□□□□□ -1.97
PRPF39Q86UA1 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
PRPF39Q86UA1 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
PRPF39Q86UA1 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
PRPF39Q86UA1 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.76□□□□□ -1.97
PRPF39Q86UA1 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
PRPF39Q86UA1 RNU6-859P-201ENST00000362728 107 ntBASIC2.76□□□□□ -1.97
PRPF39Q86UA1 RNU6-371P-201ENST00000364283 108 ntBASIC2.76□□□□□ -1.97
PRPF39Q86UA1 Y_RNA.359-201ENST00000365498 102 ntBASIC2.76□□□□□ -1.97
PRPF39Q86UA1 RNU6-72P-201ENST00000384285 79 ntBASIC2.76□□□□□ -1.97
PRPF39Q86UA1 SNORD116-1-201ENST00000384335 95 ntBASIC2.76□□□□□ -1.97
PRPF39Q86UA1 RNA5SP21-201ENST00000410917 96 ntBASIC2.76□□□□□ -1.97
PRPF39Q86UA1 AC138623.1-201ENST00000418060 216 ntBASIC2.76□□□□□ -1.97
PRPF39Q86UA1 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC2.76□□□□□ -1.97
PRPF39Q86UA1 AC097463.2-201ENST00000421074 142 ntBASIC2.76□□□□□ -1.97
PRPF39Q86UA1 AL596276.1-201ENST00000434465 418 ntBASIC2.76□□□□□ -1.97
PRPF39Q86UA1 RPL7P12-201ENST00000446719 750 ntBASIC2.76□□□□□ -1.97
PRPF39Q86UA1 AC132479.1-201ENST00000449160 144 ntBASIC2.76□□□□□ -1.97
PRPF39Q86UA1 AC006026.2-201ENST00000457376 180 ntBASIC2.76□□□□□ -1.97
PRPF39Q86UA1 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.76□□□□□ -1.97
PRPF39Q86UA1 RPS3AP17-201ENST00000472594 777 ntBASIC2.76□□□□□ -1.97
PRPF39Q86UA1 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.76□□□□□ -1.97
PRPF39Q86UA1 AC010486.1-201ENST00000511793 424 ntBASIC2.76□□□□□ -1.97
PRPF39Q86UA1 SMURF2P1-201ENST00000514992 481 ntBASIC2.76□□□□□ -1.97
PRPF39Q86UA1 MIR892C-201ENST00000516410 77 ntBASIC2.76□□□□□ -1.97
PRPF39Q86UA1 RNU6-1178P-201ENST00000516674 107 ntBASIC2.76□□□□□ -1.97
PRPF39Q86UA1 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.76□□□□□ -1.97
PRPF39Q86UA1 FAM92A1P1-201ENST00000528023 890 ntBASIC2.76□□□□□ -1.97
PRPF39Q86UA1 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.76□□□□□ -1.97
PRPF39Q86UA1 MIR3611-201ENST00000584484 83 ntBASIC2.76□□□□□ -1.97
PRPF39Q86UA1 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.76□□□□□ -1.97
PRPF39Q86UA1 AC096772.1-201ENST00000609146 564 ntBASIC2.76□□□□□ -1.97
PRPF39Q86UA1 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.76□□□□□ -1.97
PRPF39Q86UA1 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.76□□□□□ -1.97
PRPF39Q86UA1 SCARNA4-202ENST00000625402 129 ntBASIC2.76□□□□□ -1.97
PRPF39Q86UA1 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.76□□□□□ -1.97
PRPF39Q86UA1 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
PRPF39Q86UA1 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.75□□□□□ -1.97
PRPF39Q86UA1 Y_RNA.296-201ENST00000364930 108 ntBASIC2.75□□□□□ -1.97
PRPF39Q86UA1 MIR592-201ENST00000384959 97 ntBASIC2.75□□□□□ -1.97
PRPF39Q86UA1 CIR1P3-201ENST00000405137 479 ntBASIC2.75□□□□□ -1.97
PRPF39Q86UA1 AL139413.1-201ENST00000421309 217 ntBASIC2.75□□□□□ -1.97
PRPF39Q86UA1 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.75□□□□□ -1.97
PRPF39Q86UA1 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.75□□□□□ -1.97
PRPF39Q86UA1 ARL5AP4-201ENST00000430731 512 ntBASIC2.75□□□□□ -1.97
PRPF39Q86UA1 MTCO2P11-201ENST00000431069 680 ntBASIC2.75□□□□□ -1.97
PRPF39Q86UA1 AL365400.1-201ENST00000431854 640 ntBASIC2.75□□□□□ -1.97
PRPF39Q86UA1 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC2.75□□□□□ -1.97
PRPF39Q86UA1 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.75□□□□□ -1.97
PRPF39Q86UA1 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.75□□□□□ -1.97
PRPF39Q86UA1 EEF1B2P7-201ENST00000451177 676 ntBASIC2.75□□□□□ -1.97
PRPF39Q86UA1 AP000705.1-201ENST00000454567 350 ntBASIC2.75□□□□□ -1.97
PRPF39Q86UA1 MED28P2-201ENST00000475771 317 ntBASIC2.75□□□□□ -1.97
PRPF39Q86UA1 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2.75□□□□□ -1.97
PRPF39Q86UA1 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.75□□□□□ -1.97
PRPF39Q86UA1 AC135279.1-201ENST00000543493 504 ntBASIC2.75□□□□□ -1.97
PRPF39Q86UA1 AC004486.1-201ENST00000546846 233 ntBASIC2.75□□□□□ -1.97
PRPF39Q86UA1 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.75□□□□□ -1.97
PRPF39Q86UA1 PIGPP4-201ENST00000584447 307 ntBASIC2.75□□□□□ -1.97
PRPF39Q86UA1 uc_338.11-201ENST00000619132 160 ntBASIC2.75□□□□□ -1.97
PRPF39Q86UA1 AC026585.1-201ENST00000619582 524 ntBASIC2.75□□□□□ -1.97
PRPF39Q86UA1 MIR3529-201ENST00000637713 78 ntBASIC2.75□□□□□ -1.97
PRPF39Q86UA1 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
PRPF39Q86UA1 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.74□□□□□ -1.97
PRPF39Q86UA1 RNU6-1042P-201ENST00000384204 107 ntBASIC2.74□□□□□ -1.97
PRPF39Q86UA1 RNU4-46P-201ENST00000410818 138 ntBASIC2.74□□□□□ -1.97
PRPF39Q86UA1 CDK8P2-201ENST00000415020 547 ntBASIC2.74□□□□□ -1.97
PRPF39Q86UA1 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.74□□□□□ -1.97
PRPF39Q86UA1 MTCO3P30-201ENST00000426425 670 ntBASIC2.74□□□□□ -1.97
PRPF39Q86UA1 AC073464.1-201ENST00000429823 534 ntBASIC2.74□□□□□ -1.97
PRPF39Q86UA1 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.74□□□□□ -1.97
PRPF39Q86UA1 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.74□□□□□ -1.97
PRPF39Q86UA1 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.74□□□□□ -1.97
PRPF39Q86UA1 CKS1BP2-201ENST00000497342 240 ntBASIC2.74□□□□□ -1.97
PRPF39Q86UA1 MTND3P25-201ENST00000509243 135 ntBASIC2.74□□□□□ -1.97
PRPF39Q86UA1 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.74□□□□□ -1.97
PRPF39Q86UA1 TBCAP3-201ENST00000512475 312 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 139 ms