| ATG9A | Q7Z3C6 | FBXO11-201 | ENST00000402508 | 3844 nt | APPRIS P1 TSL 1 (best) BASIC | 3 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | MIR1277-201 | ENST00000408536 | 78 nt | BASIC | 3 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | RNA5SP344-201 | ENST00000411081 | 104 nt | BASIC | 3 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | USP9YP6-201 | ENST00000413550 | 854 nt | BASIC | 3 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | AC092047.1-201 | ENST00000424997 | 240 nt | BASIC | 3 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | MTCO1P20-201 | ENST00000425366 | 358 nt | BASIC | 3 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | ELOCP14-201 | ENST00000428070 | 331 nt | BASIC | 3 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | AC092573.2-201 | ENST00000434546 | 243 nt | BASIC | 3 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | RPS15AP9-201 | ENST00000439856 | 381 nt | BASIC | 3 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | ELOCP7-201 | ENST00000439968 | 331 nt | BASIC | 3 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | AC007879.3-202 | ENST00000448786 | 823 nt | TSL 1 (best) BASIC | 3 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | FDX1P2-201 | ENST00000450769 | 375 nt | BASIC | 3 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | AC003071.1-201 | ENST00000451219 | 789 nt | BASIC | 3 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | FGF7P6-202 | ENST00000451282 | 293 nt | BASIC | 3 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | AC092567.1-201 | ENST00000452397 | 251 nt | TSL 3 BASIC | 3 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | RPS29P15-201 | ENST00000458329 | 171 nt | BASIC | 3 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | AC046136.1-201 | ENST00000459855 | 533 nt | TSL 3 BASIC | 3 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | MCCC1-AS1-201 | ENST00000471731 | 765 nt | TSL 5 BASIC | 3 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | RN7SL636P-201 | ENST00000497504 | 294 nt | BASIC | 3 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | MIR4703-201 | ENST00000577728 | 79 nt | BASIC | 3 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | AC011933.3-201 | ENST00000578226 | 372 nt | TSL 1 (best) BASIC | 3 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | AC096708.3-201 | ENST00000584226 | 559 nt | TSL 2 BASIC | 3 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | RBM11P1-201 | ENST00000604951 | 799 nt | BASIC | 3 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | AC103810.6-201 | ENST00000606708 | 136 nt | BASIC | 3 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | AP001596.2-201 | ENST00000608410 | 312 nt | BASIC | 3 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | AC046143.2-201 | ENST00000609789 | 160 nt | BASIC | 3 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | UBE2Q2P6-201 | ENST00000612666 | 153 nt | BASIC | 3 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | SMIM2-AS1-204 | ENST00000619472 | 746 nt | TSL 3 BASIC | 3 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | AC007405.1-203 | ENST00000623667 | 932 nt | TSL 5 BASIC | 3 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | VPS8-228 | ENST00000628962 | 207 nt | TSL 5 BASIC | 3 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | GPBP1-201 | ENST00000264779 | 1786 nt | APPRIS ALT2 TSL 1 (best) BASIC | 3 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | DNAH14-210 | ENST00000439375 | 13548 nt | APPRIS P1 TSL 5 BASIC | 2.99 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | AC006020.1-201 | ENST00000420179 | 1854 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | RNU1-109P-201 | ENST00000383960 | 147 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | MIR592-201 | ENST00000384959 | 97 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | TRAJ26-201 | ENST00000390511 | 60 nt | APPRIS P1 BASIC | 2.99 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | RNA5SP252-201 | ENST00000391131 | 119 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | AL139095.1-201 | ENST00000404326 | 391 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | MIR548F1-201 | ENST00000408667 | 84 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | RNU2-25P-201 | ENST00000411041 | 191 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | RNA5SP111-201 | ENST00000411386 | 101 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | AL513477.1-202 | ENST00000417061 | 214 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | AL356134.1-201 | ENST00000419815 | 373 nt | TSL 3 BASIC | 2.99 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | SNRPEP10-201 | ENST00000420249 | 274 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | AC018816.1-203 | ENST00000441894 | 338 nt | TSL 3 BASIC | 2.99 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | SFTA1P-203 | ENST00000446372 | 693 nt | TSL 1 (best) BASIC | 2.99 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | FTH1P25-201 | ENST00000447665 | 469 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | AC013727.2-201 | ENST00000447761 | 545 nt | TSL 4 BASIC | 2.99 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | AC092798.1-201 | ENST00000458542 | 409 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | TRBV12-1-201 | ENST00000479785 | 344 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | RN7SL499P-201 | ENST00000481141 | 276 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | AC106892.1-201 | ENST00000491608 | 406 nt | TSL 3 BASIC | 2.99 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | EIF4EP3-201 | ENST00000498782 | 656 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | AC098591.2-201 | ENST00000510152 | 315 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | AC008413.1-201 | ENST00000511864 | 177 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | RNU6-123P-201 | ENST00000516163 | 102 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | CASP1P1-201 | ENST00000526345 | 212 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | AC025575.1-201 | ENST00000548497 | 544 nt | TSL 4 BASIC | 2.99 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | AC015813.2-201 | ENST00000578794 | 711 nt | APPRIS P1 TSL 3 BASIC | 2.99 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | MIR3609-201 | ENST00000582661 | 80 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | AL670379.4-201 | ENST00000605279 | 254 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | AC011155.2-201 | ENST00000623202 | 216 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | AC006355.2-201 | ENST00000629240 | 317 nt | TSL 3 BASIC | 2.99 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | AC026241.1-201 | ENST00000517873 | 2142 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | LUZP4-201 | ENST00000371920 | 1701 nt | APPRIS P2 TSL 1 (best) BASIC | 2.99 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | TTC6-201 | ENST00000267368 | 1681 nt | TSL 5 BASIC | 2.98 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | KCNIP4-IT1-201 | ENST00000627566 | 9848 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | AL139276.1-201 | ENST00000311910 | 1001 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | RNU6-1180P-201 | ENST00000364935 | 107 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | RNU6-877P-201 | ENST00000383868 | 107 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | SNORA69-201 | ENST00000383895 | 132 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | SNORD37.1-201 | ENST00000390968 | 65 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | AL109914.1-201 | ENST00000414740 | 146 nt | TSL 5 BASIC | 2.98 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | BX682237.1-201 | ENST00000415016 | 335 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | ELF3-AS1-201 | ENST00000415582 | 500 nt | TSL 2 BASIC | 2.98 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | SNRPFP3-201 | ENST00000457792 | 225 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | LINC01326-201 | ENST00000495159 | 755 nt | TSL 2 BASIC | 2.98 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | LINC02377-201 | ENST00000500169 | 450 nt | TSL 3 BASIC | 2.98 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | SEM1P1-201 | ENST00000506694 | 209 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | AC079140.5-201 | ENST00000507882 | 310 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | AC234781.5-201 | ENST00000508429 | 271 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | AC026436.1-201 | ENST00000510537 | 270 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | RNU4ATAC8P-201 | ENST00000516196 | 109 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | RNU6-914P-201 | ENST00000516749 | 109 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | SNORD60.2-201 | ENST00000516883 | 86 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | AC021698.1-201 | ENST00000524858 | 716 nt | TSL 3 BASIC | 2.98 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | AC007495.2-202 | ENST00000564102 | 535 nt | TSL 4 BASIC | 2.98 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | AC005357.2-201 | ENST00000586473 | 583 nt | TSL 2 BASIC | 2.98 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | AC008521.1-201 | ENST00000587471 | 187 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | DISC2.1-201 | ENST00000612827 | 205 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | AL590808.1-201 | ENST00000618696 | 141 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | FER-210 | ENST00000628534 | 558 nt | TSL 5 BASIC | 2.98 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | SEPT14P19-202 | ENST00000632397 | 370 nt | TSL 3 BASIC | 2.98 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | AL512643.1-201 | ENST00000635735 | 524 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | MIR3688-2-201 | ENST00000636963 | 87 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | USP45-208 | ENST00000500704 | 5826 nt | APPRIS P1 TSL 5 BASIC | 2.98 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | ZNF626-204 | ENST00000612591 | 4404 nt | APPRIS P1 TSL 5 BASIC | 2.97 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | APC-201 | ENST00000257430 | 10701 nt | APPRIS P1 TSL 5 BASIC | 2.97 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | RAPGEF6-210 | ENST00000512052 | 3535 nt | TSL 2 BASIC | 2.97 | □□□□□ -1.93 | | |
| ATG9A | Q7Z3C6 | ANKRD36BP1-202 | ENST00000604892 | 1417 nt | BASIC | 2.97 | □□□□□ -1.93 | | |