Protein–RNA interactions for Protein: Q70EL4

USP43, Ubiquitin carboxyl-terminal hydrolase 43, humanhuman

Predictions only

Length 1,123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP43Q70EL4 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
USP43Q70EL4 SNORD37.1-201ENST00000390968 65 ntBASIC3.03□□□□□ -1.92
USP43Q70EL4 MIR887-201ENST00000401258 79 ntBASIC3.03□□□□□ -1.92
USP43Q70EL4 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.03□□□□□ -1.92
USP43Q70EL4 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.03□□□□□ -1.92
USP43Q70EL4 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
USP43Q70EL4 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.03□□□□□ -1.92
USP43Q70EL4 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.03□□□□□ -1.92
USP43Q70EL4 AC107399.1-201ENST00000451226 265 ntBASIC3.03□□□□□ -1.92
USP43Q70EL4 RPL30P15-201ENST00000457129 321 ntBASIC3.03□□□□□ -1.92
USP43Q70EL4 RNU7-59P-201ENST00000459101 61 ntBASIC3.03□□□□□ -1.92
USP43Q70EL4 AC128713.1-201ENST00000471495 306 ntBASIC3.03□□□□□ -1.92
USP43Q70EL4 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.03□□□□□ -1.92
USP43Q70EL4 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.03□□□□□ -1.92
USP43Q70EL4 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.03□□□□□ -1.92
USP43Q70EL4 GMPSP1-201ENST00000514075 579 ntBASIC3.03□□□□□ -1.92
USP43Q70EL4 RNU2-10P-201ENST00000516375 211 ntBASIC3.03□□□□□ -1.92
USP43Q70EL4 RNA5SP454-201ENST00000517231 127 ntBASIC3.03□□□□□ -1.92
USP43Q70EL4 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.03□□□□□ -1.92
USP43Q70EL4 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.03□□□□□ -1.92
USP43Q70EL4 AL133153.1-201ENST00000557756 303 ntBASIC3.03□□□□□ -1.92
USP43Q70EL4 MIR4703-201ENST00000577728 79 ntBASIC3.03□□□□□ -1.92
USP43Q70EL4 MIR3672-201ENST00000584290 82 ntBASIC3.03□□□□□ -1.92
USP43Q70EL4 AC006557.5-201ENST00000603126 811 ntBASIC3.03□□□□□ -1.92
USP43Q70EL4 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC3.03□□□□□ -1.92
USP43Q70EL4 AL355810.1-201ENST00000614629 552 ntBASIC3.03□□□□□ -1.92
USP43Q70EL4 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.03□□□□□ -1.92
USP43Q70EL4 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.03□□□□□ -1.92
USP43Q70EL4 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.93
USP43Q70EL4 RNU6-238P-201ENST00000363313 106 ntBASIC3.02□□□□□ -1.93
USP43Q70EL4 Y_RNA.212-201ENST00000364177 102 ntBASIC3.02□□□□□ -1.93
USP43Q70EL4 RNU6-266P-201ENST00000364225 107 ntBASIC3.02□□□□□ -1.93
USP43Q70EL4 RNA5SP267-201ENST00000364893 126 ntBASIC3.02□□□□□ -1.93
USP43Q70EL4 Y_RNA.378-201ENST00000365652 113 ntBASIC3.02□□□□□ -1.93
USP43Q70EL4 RNU6-1040P-201ENST00000383974 107 ntBASIC3.02□□□□□ -1.93
USP43Q70EL4 RNU6-1029P-201ENST00000384109 107 ntBASIC3.02□□□□□ -1.93
USP43Q70EL4 RNU6-1181P-201ENST00000384191 106 ntBASIC3.02□□□□□ -1.93
USP43Q70EL4 Y_RNA.455-201ENST00000384230 98 ntBASIC3.02□□□□□ -1.93
USP43Q70EL4 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
USP43Q70EL4 HMGN1P24-201ENST00000412282 298 ntBASIC3.02□□□□□ -1.93
USP43Q70EL4 Z99755.1-201ENST00000414048 380 ntBASIC3.02□□□□□ -1.93
USP43Q70EL4 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.02□□□□□ -1.93
USP43Q70EL4 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.02□□□□□ -1.93
USP43Q70EL4 RPL21P66-201ENST00000426566 466 ntBASIC3.02□□□□□ -1.93
USP43Q70EL4 MTND1P17-201ENST00000448961 204 ntBASIC3.02□□□□□ -1.93
USP43Q70EL4 AC115115.1-201ENST00000449927 248 ntBASIC3.02□□□□□ -1.93
USP43Q70EL4 SSXP4-201ENST00000451349 245 ntBASIC3.02□□□□□ -1.93
USP43Q70EL4 UQCRHP3-201ENST00000451503 251 ntBASIC3.02□□□□□ -1.93
USP43Q70EL4 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.02□□□□□ -1.93
USP43Q70EL4 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.02□□□□□ -1.93
USP43Q70EL4 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.02□□□□□ -1.93
USP43Q70EL4 RPL22P13-201ENST00000493291 347 ntBASIC3.02□□□□□ -1.93
USP43Q70EL4 AC097473.1-201ENST00000508142 408 ntBASIC3.02□□□□□ -1.93
USP43Q70EL4 MTND1P19-201ENST00000511780 315 ntBASIC3.02□□□□□ -1.93
USP43Q70EL4 RNU6-408P-201ENST00000515910 100 ntBASIC3.02□□□□□ -1.93
USP43Q70EL4 RNU6-1143P-201ENST00000516125 104 ntBASIC3.02□□□□□ -1.93
USP43Q70EL4 RNU7-51P-201ENST00000516560 62 ntBASIC3.02□□□□□ -1.93
USP43Q70EL4 Y_RNA.721-201ENST00000517207 102 ntBASIC3.02□□□□□ -1.93
USP43Q70EL4 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.02□□□□□ -1.93
USP43Q70EL4 AC109635.4-202ENST00000531666 412 ntBASIC3.02□□□□□ -1.93
USP43Q70EL4 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.02□□□□□ -1.93
USP43Q70EL4 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.02□□□□□ -1.93
USP43Q70EL4 AC024619.4-201ENST00000580924 316 ntBASIC3.02□□□□□ -1.93
USP43Q70EL4 MIR5690-201ENST00000583739 73 ntBASIC3.02□□□□□ -1.93
USP43Q70EL4 AC011155.2-201ENST00000623202 216 ntBASIC3.02□□□□□ -1.93
USP43Q70EL4 AC091925.2-201ENST00000625059 256 ntBASIC3.02□□□□□ -1.93
USP43Q70EL4 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.02□□□□□ -1.93
USP43Q70EL4 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.02□□□□□ -1.93
USP43Q70EL4 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
USP43Q70EL4 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.02□□□□□ -1.93
USP43Q70EL4 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
USP43Q70EL4 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
USP43Q70EL4 AL353743.1-202ENST00000431724 1695 ntBASIC3.01□□□□□ -1.93
USP43Q70EL4 RNU6-989P-201ENST00000362756 107 ntBASIC3.01□□□□□ -1.93
USP43Q70EL4 RNA5SP50-201ENST00000363731 107 ntBASIC3.01□□□□□ -1.93
USP43Q70EL4 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
USP43Q70EL4 Y_RNA.396-201ENST00000383949 103 ntBASIC3.01□□□□□ -1.93
USP43Q70EL4 RNU6-472P-201ENST00000384299 107 ntBASIC3.01□□□□□ -1.93
USP43Q70EL4 Y_RNA.482-201ENST00000384377 111 ntBASIC3.01□□□□□ -1.93
USP43Q70EL4 SNORA46-201ENST00000384762 135 ntBASIC3.01□□□□□ -1.93
USP43Q70EL4 RNU1-101P-201ENST00000391171 127 ntBASIC3.01□□□□□ -1.93
USP43Q70EL4 MTCO2P33-201ENST00000402100 465 ntBASIC3.01□□□□□ -1.93
USP43Q70EL4 AL606923.1-201ENST00000406616 190 ntBASIC3.01□□□□□ -1.93
USP43Q70EL4 ARL5AP1-201ENST00000418991 388 ntBASIC3.01□□□□□ -1.93
USP43Q70EL4 RPL36AP6-201ENST00000435770 321 ntBASIC3.01□□□□□ -1.93
USP43Q70EL4 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.01□□□□□ -1.93
USP43Q70EL4 CST9LP2-201ENST00000437612 320 ntBASIC3.01□□□□□ -1.93
USP43Q70EL4 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.01□□□□□ -1.93
USP43Q70EL4 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.01□□□□□ -1.93
USP43Q70EL4 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.01□□□□□ -1.93
USP43Q70EL4 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.01□□□□□ -1.93
USP43Q70EL4 PCNPP5-201ENST00000452246 481 ntBASIC3.01□□□□□ -1.93
USP43Q70EL4 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.01□□□□□ -1.93
USP43Q70EL4 TRBVA-201ENST00000498804 316 ntBASIC3.01□□□□□ -1.93
USP43Q70EL4 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.01□□□□□ -1.93
USP43Q70EL4 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.01□□□□□ -1.93
USP43Q70EL4 RNU6-789P-201ENST00000517105 102 ntBASIC3.01□□□□□ -1.93
USP43Q70EL4 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.01□□□□□ -1.93
USP43Q70EL4 SETP7-201ENST00000552169 453 ntBASIC3.01□□□□□ -1.93
USP43Q70EL4 NCAPGP2-201ENST00000557911 754 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 136.4 ms