Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
RUFY4Q6ZNE9 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.29□□□□□ -1.72
RUFY4Q6ZNE9 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.29□□□□□ -1.72
RUFY4Q6ZNE9 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RUFY4Q6ZNE9 RNU6-217P-201ENST00000384164 104 ntBASIC4.28□□□□□ -1.72
RUFY4Q6ZNE9 MIR493-201ENST00000385254 89 ntBASIC4.28□□□□□ -1.72
RUFY4Q6ZNE9 MIR1251-201ENST00000408552 70 ntBASIC4.28□□□□□ -1.72
RUFY4Q6ZNE9 RNA5SP129-201ENST00000410276 118 ntBASIC4.28□□□□□ -1.72
RUFY4Q6ZNE9 RNU6-101P-201ENST00000410323 104 ntBASIC4.28□□□□□ -1.72
RUFY4Q6ZNE9 HMGB1P12-201ENST00000438594 598 ntBASIC4.28□□□□□ -1.72
RUFY4Q6ZNE9 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC4.28□□□□□ -1.72
RUFY4Q6ZNE9 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC4.28□□□□□ -1.72
RUFY4Q6ZNE9 MTATP6P7-201ENST00000453315 681 ntBASIC4.28□□□□□ -1.72
RUFY4Q6ZNE9 AL133162.1-201ENST00000463228 453 ntBASIC4.28□□□□□ -1.72
RUFY4Q6ZNE9 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.28□□□□□ -1.72
RUFY4Q6ZNE9 UBE2CP3-201ENST00000502715 450 ntBASIC4.28□□□□□ -1.72
RUFY4Q6ZNE9 NDUFB4P9-201ENST00000511646 388 ntBASIC4.28□□□□□ -1.72
RUFY4Q6ZNE9 AC022695.1-201ENST00000522089 237 ntBASIC4.28□□□□□ -1.72
RUFY4Q6ZNE9 COX6CP5-201ENST00000527162 228 ntBASIC4.28□□□□□ -1.72
RUFY4Q6ZNE9 CBX3P8-201ENST00000532412 525 ntBASIC4.28□□□□□ -1.72
RUFY4Q6ZNE9 MIR3149-201ENST00000584629 83 ntBASIC4.28□□□□□ -1.72
RUFY4Q6ZNE9 AC244505.7-201ENST00000599675 272 ntBASIC4.28□□□□□ -1.72
RUFY4Q6ZNE9 VN1R107P-201ENST00000601784 209 ntBASIC4.28□□□□□ -1.72
RUFY4Q6ZNE9 SRGNP1-201ENST00000603392 451 ntBASIC4.28□□□□□ -1.72
RUFY4Q6ZNE9 AL161756.2-201ENST00000604597 246 ntBASIC4.28□□□□□ -1.72
RUFY4Q6ZNE9 MIR3976-201ENST00000606807 139 ntBASIC4.28□□□□□ -1.72
RUFY4Q6ZNE9 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.28□□□□□ -1.72
RUFY4Q6ZNE9 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.28□□□□□ -1.72
RUFY4Q6ZNE9 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
RUFY4Q6ZNE9 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RUFY4Q6ZNE9 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
RUFY4Q6ZNE9 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.27□□□□□ -1.73
RUFY4Q6ZNE9 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RUFY4Q6ZNE9 AC008669.1-201ENST00000565823 2178 ntBASIC4.27□□□□□ -1.73
RUFY4Q6ZNE9 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RUFY4Q6ZNE9 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.27□□□□□ -1.73
RUFY4Q6ZNE9 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RUFY4Q6ZNE9 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC4.27□□□□□ -1.73
RUFY4Q6ZNE9 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
RUFY4Q6ZNE9 Y_RNA.389-201ENST00000383924 113 ntBASIC4.27□□□□□ -1.73
RUFY4Q6ZNE9 MIR568-201ENST00000385036 95 ntBASIC4.27□□□□□ -1.73
RUFY4Q6ZNE9 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
RUFY4Q6ZNE9 AL138878.1-201ENST00000405131 347 ntBASIC4.27□□□□□ -1.73
RUFY4Q6ZNE9 RNU6-1156P-201ENST00000410365 100 ntBASIC4.27□□□□□ -1.73
RUFY4Q6ZNE9 RN7SKP177-201ENST00000410567 355 ntBASIC4.27□□□□□ -1.73
RUFY4Q6ZNE9 NUP35P1-201ENST00000422734 947 ntBASIC4.27□□□□□ -1.73
RUFY4Q6ZNE9 AL591419.1-201ENST00000427423 339 ntBASIC4.27□□□□□ -1.73
RUFY4Q6ZNE9 AL512844.2-201ENST00000433990 593 ntBASIC4.27□□□□□ -1.73
RUFY4Q6ZNE9 AC092573.2-201ENST00000434546 243 ntBASIC4.27□□□□□ -1.73
RUFY4Q6ZNE9 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.27□□□□□ -1.73
RUFY4Q6ZNE9 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.27□□□□□ -1.73
RUFY4Q6ZNE9 AC006026.2-201ENST00000457376 180 ntBASIC4.27□□□□□ -1.73
RUFY4Q6ZNE9 RPL21P11-201ENST00000461458 483 ntBASIC4.27□□□□□ -1.73
RUFY4Q6ZNE9 RN7SL271P-201ENST00000487601 295 ntBASIC4.27□□□□□ -1.73
RUFY4Q6ZNE9 RNU6-377P-201ENST00000515965 102 ntBASIC4.27□□□□□ -1.73
RUFY4Q6ZNE9 SNORA40.14-201ENST00000516543 86 ntBASIC4.27□□□□□ -1.73
RUFY4Q6ZNE9 AP005902.1-201ENST00000521358 186 ntBASIC4.27□□□□□ -1.73
RUFY4Q6ZNE9 AP002404.1-201ENST00000532005 451 ntBASIC4.27□□□□□ -1.73
RUFY4Q6ZNE9 GNRHR2P1-201ENST00000555315 631 ntBASIC4.27□□□□□ -1.73
RUFY4Q6ZNE9 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.27□□□□□ -1.73
RUFY4Q6ZNE9 MIR4782-201ENST00000577987 79 ntBASIC4.27□□□□□ -1.73
RUFY4Q6ZNE9 MIR5696-201ENST00000578474 85 ntBASIC4.27□□□□□ -1.73
RUFY4Q6ZNE9 7SK.7-201ENST00000603504 247 ntBASIC4.27□□□□□ -1.73
RUFY4Q6ZNE9 AC005046.1-201ENST00000608515 625 ntBASIC4.27□□□□□ -1.73
RUFY4Q6ZNE9 FTX_3.1-201ENST00000610451 147 ntBASIC4.27□□□□□ -1.73
RUFY4Q6ZNE9 U4.1-201ENST00000620349 87 ntBASIC4.27□□□□□ -1.73
RUFY4Q6ZNE9 ZNF299P-201ENST00000406845 1804 ntBASIC4.27□□□□□ -1.73
RUFY4Q6ZNE9 IPO8P1-201ENST00000455509 3109 ntBASIC4.27□□□□□ -1.73
RUFY4Q6ZNE9 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.27□□□□□ -1.73
RUFY4Q6ZNE9 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
RUFY4Q6ZNE9 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC4.26□□□□□ -1.73
RUFY4Q6ZNE9 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.26□□□□□ -1.73
RUFY4Q6ZNE9 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RUFY4Q6ZNE9 Y_RNA.314-201ENST00000365114 102 ntBASIC4.26□□□□□ -1.73
RUFY4Q6ZNE9 RNU5E-7P-201ENST00000365290 117 ntBASIC4.26□□□□□ -1.73
RUFY4Q6ZNE9 Y_RNA.424-201ENST00000384063 103 ntBASIC4.26□□□□□ -1.73
RUFY4Q6ZNE9 MIR625-201ENST00000385047 85 ntBASIC4.26□□□□□ -1.73
RUFY4Q6ZNE9 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC4.26□□□□□ -1.73
RUFY4Q6ZNE9 MRPS18CP6-201ENST00000423587 223 ntBASIC4.26□□□□□ -1.73
RUFY4Q6ZNE9 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.26□□□□□ -1.73
RUFY4Q6ZNE9 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC4.26□□□□□ -1.73
RUFY4Q6ZNE9 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RUFY4Q6ZNE9 AC093852.1-201ENST00000503587 266 ntBASIC4.26□□□□□ -1.73
RUFY4Q6ZNE9 BTF3L4P4-201ENST00000506381 449 ntBASIC4.26□□□□□ -1.73
RUFY4Q6ZNE9 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.26□□□□□ -1.73
RUFY4Q6ZNE9 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RUFY4Q6ZNE9 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.26□□□□□ -1.73
RUFY4Q6ZNE9 AC005476.1-201ENST00000554427 397 ntBASIC4.26□□□□□ -1.73
RUFY4Q6ZNE9 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.26□□□□□ -1.73
RUFY4Q6ZNE9 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.26□□□□□ -1.73
RUFY4Q6ZNE9 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC4.26□□□□□ -1.73
RUFY4Q6ZNE9 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC4.26□□□□□ -1.73
RUFY4Q6ZNE9 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC4.26□□□□□ -1.73
RUFY4Q6ZNE9 AC006006.1-201ENST00000603082 144 ntBASIC4.26□□□□□ -1.73
RUFY4Q6ZNE9 Z98751.3-201ENST00000604447 521 ntBASIC4.26□□□□□ -1.73
RUFY4Q6ZNE9 SNORD58B-201ENST00000607313 66 ntBASIC4.26□□□□□ -1.73
RUFY4Q6ZNE9 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.26□□□□□ -1.73
RUFY4Q6ZNE9 AC007792.1-201ENST00000623023 402 ntBASIC4.26□□□□□ -1.73
RUFY4Q6ZNE9 AC244205.2-202ENST00000635781 342 ntBASIC4.26□□□□□ -1.73
RUFY4Q6ZNE9 U4.7-201ENST00000638126 106 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 181.6 ms