Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 RPL21P16-201ENST00000495531 483 ntBASIC3.29□□□□□ -1.88
SYNE3Q6ZMZ3 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.29□□□□□ -1.88
SYNE3Q6ZMZ3 CENPUP1-201ENST00000526649 1202 ntBASIC3.29□□□□□ -1.88
SYNE3Q6ZMZ3 AC078814.3-201ENST00000553036 491 ntBASIC3.29□□□□□ -1.88
SYNE3Q6ZMZ3 AC090115.3-201ENST00000553218 849 ntBASIC3.29□□□□□ -1.88
SYNE3Q6ZMZ3 AL118558.2-201ENST00000556294 238 ntBASIC3.29□□□□□ -1.88
SYNE3Q6ZMZ3 AC068135.2-201ENST00000569293 1028 ntBASIC3.29□□□□□ -1.88
SYNE3Q6ZMZ3 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.29□□□□□ -1.88
SYNE3Q6ZMZ3 MIR3941-201ENST00000582572 103 ntBASIC3.29□□□□□ -1.88
SYNE3Q6ZMZ3 AC073539.2-201ENST00000597113 165 ntBASIC3.29□□□□□ -1.88
SYNE3Q6ZMZ3 RNU6-89P-201ENST00000606519 100 ntBASIC3.29□□□□□ -1.88
SYNE3Q6ZMZ3 AC069234.5-201ENST00000611056 416 ntBASIC3.29□□□□□ -1.88
SYNE3Q6ZMZ3 AC135507.2-201ENST00000612443 309 ntBASIC3.29□□□□□ -1.88
SYNE3Q6ZMZ3 AC006504.8-201ENST00000621046 635 ntBASIC3.29□□□□□ -1.88
SYNE3Q6ZMZ3 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.29□□□□□ -1.88
SYNE3Q6ZMZ3 AL137790.1-201ENST00000634283 177 ntBASIC3.29□□□□□ -1.88
SYNE3Q6ZMZ3 MIR3662-201ENST00000637030 95 ntBASIC3.29□□□□□ -1.88
SYNE3Q6ZMZ3 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.29□□□□□ -1.88
SYNE3Q6ZMZ3 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SYNE3Q6ZMZ3 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.29□□□□□ -1.88
SYNE3Q6ZMZ3 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.28□□□□□ -1.88
SYNE3Q6ZMZ3 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
SYNE3Q6ZMZ3 NACAP2-201ENST00000318548 624 ntBASIC3.28□□□□□ -1.88
SYNE3Q6ZMZ3 Y_RNA.157-201ENST00000363638 102 ntBASIC3.28□□□□□ -1.88
SYNE3Q6ZMZ3 SNORA14A-201ENST00000364773 135 ntBASIC3.28□□□□□ -1.88
SYNE3Q6ZMZ3 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.28□□□□□ -1.88
SYNE3Q6ZMZ3 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
SYNE3Q6ZMZ3 RNU1-73P-201ENST00000383971 164 ntBASIC3.28□□□□□ -1.88
SYNE3Q6ZMZ3 RNU6-166P-201ENST00000384371 107 ntBASIC3.28□□□□□ -1.88
SYNE3Q6ZMZ3 RNU6-434P-201ENST00000384376 107 ntBASIC3.28□□□□□ -1.88
SYNE3Q6ZMZ3 RNU6-45P-201ENST00000384471 107 ntBASIC3.28□□□□□ -1.88
SYNE3Q6ZMZ3 AL139039.1-201ENST00000401900 692 ntBASIC3.28□□□□□ -1.88
SYNE3Q6ZMZ3 SNORD88.1-201ENST00000408684 91 ntBASIC3.28□□□□□ -1.88
SYNE3Q6ZMZ3 RNU6-607P-201ENST00000411283 108 ntBASIC3.28□□□□□ -1.88
SYNE3Q6ZMZ3 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.28□□□□□ -1.88
SYNE3Q6ZMZ3 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC3.28□□□□□ -1.88
SYNE3Q6ZMZ3 AL645937.1-202ENST00000421799 937 ntBASIC3.28□□□□□ -1.88
SYNE3Q6ZMZ3 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC3.28□□□□□ -1.88
SYNE3Q6ZMZ3 ERLEC1P1-201ENST00000433806 578 ntBASIC3.28□□□□□ -1.88
SYNE3Q6ZMZ3 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.28□□□□□ -1.88
SYNE3Q6ZMZ3 WASF1P1-201ENST00000447560 1131 ntBASIC3.28□□□□□ -1.88
SYNE3Q6ZMZ3 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.28□□□□□ -1.88
SYNE3Q6ZMZ3 RNU6-1208P-201ENST00000459588 107 ntBASIC3.28□□□□□ -1.88
SYNE3Q6ZMZ3 RPL31P58-201ENST00000469001 379 ntBASIC3.28□□□□□ -1.88
SYNE3Q6ZMZ3 Y_RNA.654-201ENST00000497848 106 ntBASIC3.28□□□□□ -1.88
SYNE3Q6ZMZ3 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.28□□□□□ -1.88
SYNE3Q6ZMZ3 SNORA9.3-201ENST00000516383 129 ntBASIC3.28□□□□□ -1.88
SYNE3Q6ZMZ3 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.28□□□□□ -1.88
SYNE3Q6ZMZ3 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.28□□□□□ -1.88
SYNE3Q6ZMZ3 AL133241.1-201ENST00000556832 487 ntBASIC3.28□□□□□ -1.88
SYNE3Q6ZMZ3 MIR5692A1-201ENST00000580523 69 ntBASIC3.28□□□□□ -1.88
SYNE3Q6ZMZ3 DUXAP9-208ENST00000622815 614 ntBASIC3.28□□□□□ -1.88
SYNE3Q6ZMZ3 AC073308.1-201ENST00000623696 305 ntBASIC3.28□□□□□ -1.88
SYNE3Q6ZMZ3 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.28□□□□□ -1.89
SYNE3Q6ZMZ3 AC121333.1-201ENST00000567488 2709 ntBASIC3.28□□□□□ -1.89
SYNE3Q6ZMZ3 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SYNE3Q6ZMZ3 AC233263.6-201ENST00000631132 1963 ntBASIC3.27□□□□□ -1.89
SYNE3Q6ZMZ3 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SYNE3Q6ZMZ3 RNU6-393P-201ENST00000384475 107 ntBASIC3.27□□□□□ -1.89
SYNE3Q6ZMZ3 MIR181B1-201ENST00000385240 110 ntBASIC3.27□□□□□ -1.89
SYNE3Q6ZMZ3 RNA5SP252-201ENST00000391131 119 ntBASIC3.27□□□□□ -1.89
SYNE3Q6ZMZ3 RNU2-3P-201ENST00000410144 191 ntBASIC3.27□□□□□ -1.89
SYNE3Q6ZMZ3 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.27□□□□□ -1.89
SYNE3Q6ZMZ3 RPL30P16-201ENST00000419341 429 ntBASIC3.27□□□□□ -1.89
SYNE3Q6ZMZ3 RPL23AP58-201ENST00000440453 469 ntBASIC3.27□□□□□ -1.89
SYNE3Q6ZMZ3 RNU7-167P-201ENST00000459160 62 ntBASIC3.27□□□□□ -1.89
SYNE3Q6ZMZ3 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.27□□□□□ -1.89
SYNE3Q6ZMZ3 AP000852.1-201ENST00000472460 573 ntBASIC3.27□□□□□ -1.89
SYNE3Q6ZMZ3 RN7SL499P-201ENST00000481141 276 ntBASIC3.27□□□□□ -1.89
SYNE3Q6ZMZ3 MTCYBP18-201ENST00000501056 747 ntBASIC3.27□□□□□ -1.89
SYNE3Q6ZMZ3 AC025755.1-201ENST00000521306 278 ntBASIC3.27□□□□□ -1.89
SYNE3Q6ZMZ3 AC118273.2-201ENST00000532092 465 ntBASIC3.27□□□□□ -1.89
SYNE3Q6ZMZ3 BNIP3P6-201ENST00000549284 499 ntBASIC3.27□□□□□ -1.89
SYNE3Q6ZMZ3 DNAJC8P1-201ENST00000554535 372 ntBASIC3.27□□□□□ -1.89
SYNE3Q6ZMZ3 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.27□□□□□ -1.89
SYNE3Q6ZMZ3 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SYNE3Q6ZMZ3 MIR3605-201ENST00000583214 100 ntBASIC3.27□□□□□ -1.89
SYNE3Q6ZMZ3 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SYNE3Q6ZMZ3 AC103705.1-201ENST00000619013 241 ntBASIC3.27□□□□□ -1.89
SYNE3Q6ZMZ3 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SYNE3Q6ZMZ3 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.27□□□□□ -1.89
SYNE3Q6ZMZ3 AC004520.1-201ENST00000608362 1413 ntBASIC3.27□□□□□ -1.89
SYNE3Q6ZMZ3 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
SYNE3Q6ZMZ3 RNU6-884P-201ENST00000363889 107 ntBASIC3.26□□□□□ -1.89
SYNE3Q6ZMZ3 SNORD14B-201ENST00000364533 90 ntBASIC3.26□□□□□ -1.89
SYNE3Q6ZMZ3 SNORD70.1-201ENST00000391007 85 ntBASIC3.26□□□□□ -1.89
SYNE3Q6ZMZ3 AL512633.1-201ENST00000399931 655 ntBASIC3.26□□□□□ -1.89
SYNE3Q6ZMZ3 AC096664.2-201ENST00000411843 406 ntBASIC3.26□□□□□ -1.89
SYNE3Q6ZMZ3 BX682237.1-201ENST00000415016 335 ntBASIC3.26□□□□□ -1.89
SYNE3Q6ZMZ3 HMGN2P30-201ENST00000423237 256 ntBASIC3.26□□□□□ -1.89
SYNE3Q6ZMZ3 AC087499.2-201ENST00000432861 149 ntBASIC3.26□□□□□ -1.89
SYNE3Q6ZMZ3 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.26□□□□□ -1.89
SYNE3Q6ZMZ3 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC3.26□□□□□ -1.89
SYNE3Q6ZMZ3 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.26□□□□□ -1.89
SYNE3Q6ZMZ3 RNU7-23P-201ENST00000459465 62 ntBASIC3.26□□□□□ -1.89
SYNE3Q6ZMZ3 AC011005.2-201ENST00000487324 359 ntBASIC3.26□□□□□ -1.89
SYNE3Q6ZMZ3 RPS27AP10-201ENST00000496103 208 ntBASIC3.26□□□□□ -1.89
SYNE3Q6ZMZ3 AC116353.2-201ENST00000505332 712 ntBASIC3.26□□□□□ -1.89
SYNE3Q6ZMZ3 HIGD1AP13-201ENST00000509878 289 ntBASIC3.26□□□□□ -1.89
SYNE3Q6ZMZ3 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms