Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SHC4Q6S5L8 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.31□□□□□ -1.88
SHC4Q6S5L8 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SHC4Q6S5L8 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SHC4Q6S5L8 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SHC4Q6S5L8 MTND4P1-201ENST00000457501 1466 ntBASIC3.3□□□□□ -1.88
SHC4Q6S5L8 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SHC4Q6S5L8 SNORA31-201ENST00000362607 130 ntBASIC3.3□□□□□ -1.88
SHC4Q6S5L8 RNA5SP374-201ENST00000362939 125 ntBASIC3.3□□□□□ -1.88
SHC4Q6S5L8 SNORA7.2-201ENST00000364446 145 ntBASIC3.3□□□□□ -1.88
SHC4Q6S5L8 RNU6-335P-201ENST00000364563 113 ntBASIC3.3□□□□□ -1.88
SHC4Q6S5L8 SNORA51.4-201ENST00000364993 124 ntBASIC3.3□□□□□ -1.88
SHC4Q6S5L8 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SHC4Q6S5L8 RNU6-639P-201ENST00000384074 107 ntBASIC3.3□□□□□ -1.88
SHC4Q6S5L8 RNU6-1105P-201ENST00000384774 107 ntBASIC3.3□□□□□ -1.88
SHC4Q6S5L8 MIR181A2-201ENST00000384863 110 ntBASIC3.3□□□□□ -1.88
SHC4Q6S5L8 PTMAP5-201ENST00000393073 333 ntBASIC3.3□□□□□ -1.88
SHC4Q6S5L8 RPL7P10-201ENST00000417407 739 ntBASIC3.3□□□□□ -1.88
SHC4Q6S5L8 AC244098.2-201ENST00000422068 99 ntBASIC3.3□□□□□ -1.88
SHC4Q6S5L8 AL358176.2-201ENST00000425769 204 ntBASIC3.3□□□□□ -1.88
SHC4Q6S5L8 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.3□□□□□ -1.88
SHC4Q6S5L8 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.3□□□□□ -1.88
SHC4Q6S5L8 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.3□□□□□ -1.88
SHC4Q6S5L8 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.3□□□□□ -1.88
SHC4Q6S5L8 CEACAMP4-201ENST00000457676 421 ntBASIC3.3□□□□□ -1.88
SHC4Q6S5L8 MIR2053-201ENST00000459295 91 ntBASIC3.3□□□□□ -1.88
SHC4Q6S5L8 AC104472.2-201ENST00000469035 601 ntBASIC3.3□□□□□ -1.88
SHC4Q6S5L8 RN7SL330P-201ENST00000469709 307 ntBASIC3.3□□□□□ -1.88
SHC4Q6S5L8 AC092185.1-201ENST00000491371 97 ntBASIC3.3□□□□□ -1.88
SHC4Q6S5L8 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.3□□□□□ -1.88
SHC4Q6S5L8 SRP72-202ENST00000504757 745 ntTSL 2 BASIC3.3□□□□□ -1.88
SHC4Q6S5L8 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.3□□□□□ -1.88
SHC4Q6S5L8 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.3□□□□□ -1.88
SHC4Q6S5L8 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.3□□□□□ -1.88
SHC4Q6S5L8 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.3□□□□□ -1.88
SHC4Q6S5L8 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.3□□□□□ -1.88
SHC4Q6S5L8 AC022418.1-201ENST00000624118 445 ntBASIC3.3□□□□□ -1.88
SHC4Q6S5L8 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
SHC4Q6S5L8 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
SHC4Q6S5L8 MTND5P10-201ENST00000603719 1809 ntBASIC3.3□□□□□ -1.88
SHC4Q6S5L8 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SHC4Q6S5L8 AC066616.2-201ENST00000559334 1481 ntBASIC3.29□□□□□ -1.88
SHC4Q6S5L8 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SHC4Q6S5L8 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.29□□□□□ -1.88
SHC4Q6S5L8 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.29□□□□□ -1.88
SHC4Q6S5L8 MIR208A-201ENST00000362287 71 ntBASIC3.29□□□□□ -1.88
SHC4Q6S5L8 RNU6-562P-201ENST00000362731 107 ntBASIC3.29□□□□□ -1.88
SHC4Q6S5L8 RNU6-76P-201ENST00000384060 104 ntBASIC3.29□□□□□ -1.88
SHC4Q6S5L8 Y_RNA.459-201ENST00000384251 102 ntBASIC3.29□□□□□ -1.88
SHC4Q6S5L8 Y_RNA.473-201ENST00000384333 102 ntBASIC3.29□□□□□ -1.88
SHC4Q6S5L8 RNU6-434P-201ENST00000384376 107 ntBASIC3.29□□□□□ -1.88
SHC4Q6S5L8 RNU6-837P-201ENST00000391056 108 ntBASIC3.29□□□□□ -1.88
SHC4Q6S5L8 AL590004.2-201ENST00000404787 371 ntBASIC3.29□□□□□ -1.88
SHC4Q6S5L8 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.29□□□□□ -1.88
SHC4Q6S5L8 AL591704.1-201ENST00000432574 275 ntBASIC3.29□□□□□ -1.88
SHC4Q6S5L8 RPL26P6-201ENST00000440913 438 ntBASIC3.29□□□□□ -1.88
SHC4Q6S5L8 BX510359.1-201ENST00000456973 237 ntBASIC3.29□□□□□ -1.88
SHC4Q6S5L8 snoU13.22-201ENST00000459428 104 ntBASIC3.29□□□□□ -1.88
SHC4Q6S5L8 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SHC4Q6S5L8 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SHC4Q6S5L8 RNU6-1016P-201ENST00000516689 94 ntBASIC3.29□□□□□ -1.88
SHC4Q6S5L8 AC009812.2-201ENST00000517657 457 ntBASIC3.29□□□□□ -1.88
SHC4Q6S5L8 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.29□□□□□ -1.88
SHC4Q6S5L8 AC106782.4-201ENST00000568264 210 ntBASIC3.29□□□□□ -1.88
SHC4Q6S5L8 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.29□□□□□ -1.88
SHC4Q6S5L8 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.29□□□□□ -1.88
SHC4Q6S5L8 MIR5690-201ENST00000583739 73 ntBASIC3.29□□□□□ -1.88
SHC4Q6S5L8 AC174048.1-201ENST00000603389 144 ntBASIC3.29□□□□□ -1.88
SHC4Q6S5L8 AC104763.2-201ENST00000604179 382 ntBASIC3.29□□□□□ -1.88
SHC4Q6S5L8 AC012468.1-201ENST00000604888 430 ntBASIC3.29□□□□□ -1.88
SHC4Q6S5L8 AC106900.2-201ENST00000604994 317 ntBASIC3.29□□□□□ -1.88
SHC4Q6S5L8 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.29□□□□□ -1.88
SHC4Q6S5L8 SDR42E1P2-201ENST00000614861 481 ntBASIC3.29□□□□□ -1.88
SHC4Q6S5L8 AL359547.2-201ENST00000615810 418 ntBASIC3.29□□□□□ -1.88
SHC4Q6S5L8 MTND5P16-201ENST00000460269 1703 ntBASIC3.29□□□□□ -1.88
SHC4Q6S5L8 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SHC4Q6S5L8 AL021368.2-201ENST00000606125 5352 ntBASIC3.29□□□□□ -1.88
SHC4Q6S5L8 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
SHC4Q6S5L8 MTND5P30-201ENST00000452896 1731 ntBASIC3.28□□□□□ -1.88
SHC4Q6S5L8 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
SHC4Q6S5L8 SNORA71.1-201ENST00000364523 117 ntBASIC3.28□□□□□ -1.88
SHC4Q6S5L8 RNU6-1303P-201ENST00000364841 107 ntBASIC3.28□□□□□ -1.88
SHC4Q6S5L8 SNORA70.4-201ENST00000365509 134 ntBASIC3.28□□□□□ -1.88
SHC4Q6S5L8 RNU6-1040P-201ENST00000383974 107 ntBASIC3.28□□□□□ -1.88
SHC4Q6S5L8 Y_RNA.404-201ENST00000383978 102 ntBASIC3.28□□□□□ -1.88
SHC4Q6S5L8 SNORA36C-201ENST00000384289 132 ntBASIC3.28□□□□□ -1.88
SHC4Q6S5L8 MIR607-201ENST00000385241 96 ntBASIC3.28□□□□□ -1.88
SHC4Q6S5L8 AL356057.3-201ENST00000402607 340 ntBASIC3.28□□□□□ -1.88
SHC4Q6S5L8 RNA5SP111-201ENST00000411386 101 ntBASIC3.28□□□□□ -1.88
SHC4Q6S5L8 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.28□□□□□ -1.88
SHC4Q6S5L8 AC018865.2-201ENST00000423631 129 ntBASIC3.28□□□□□ -1.88
SHC4Q6S5L8 AL160275.3-201ENST00000423876 471 ntBASIC3.28□□□□□ -1.88
SHC4Q6S5L8 MTATP6P4-201ENST00000427725 675 ntBASIC3.28□□□□□ -1.88
SHC4Q6S5L8 AC079780.1-201ENST00000428259 207 ntBASIC3.28□□□□□ -1.88
SHC4Q6S5L8 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.28□□□□□ -1.88
SHC4Q6S5L8 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.28□□□□□ -1.88
SHC4Q6S5L8 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.28□□□□□ -1.88
SHC4Q6S5L8 VDAC1P3-201ENST00000434069 851 ntBASIC3.28□□□□□ -1.88
SHC4Q6S5L8 MTND5P22-201ENST00000458380 195 ntBASIC3.28□□□□□ -1.88
SHC4Q6S5L8 AC026782.1-201ENST00000512952 449 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms