Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.11□□□□□ -1.91
ZNF549Q6P9A3 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.11□□□□□ -1.91
ZNF549Q6P9A3 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.11□□□□□ -1.91
ZNF549Q6P9A3 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.11□□□□□ -1.91
ZNF549Q6P9A3 CEACAMP4-201ENST00000457676 421 ntBASIC3.11□□□□□ -1.91
ZNF549Q6P9A3 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.11□□□□□ -1.91
ZNF549Q6P9A3 AC092451.1-201ENST00000480211 153 ntBASIC3.11□□□□□ -1.91
ZNF549Q6P9A3 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.11□□□□□ -1.91
ZNF549Q6P9A3 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
ZNF549Q6P9A3 AC104136.1-201ENST00000512969 394 ntBASIC3.11□□□□□ -1.91
ZNF549Q6P9A3 RNU6-677P-201ENST00000516914 101 ntBASIC3.11□□□□□ -1.91
ZNF549Q6P9A3 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.11□□□□□ -1.91
ZNF549Q6P9A3 AC093331.1-201ENST00000521474 169 ntBASIC3.11□□□□□ -1.91
ZNF549Q6P9A3 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
ZNF549Q6P9A3 CYCSP27-201ENST00000527643 293 ntBASIC3.11□□□□□ -1.91
ZNF549Q6P9A3 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.11□□□□□ -1.91
ZNF549Q6P9A3 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC3.11□□□□□ -1.91
ZNF549Q6P9A3 AL117187.1-201ENST00000555482 181 ntBASIC3.11□□□□□ -1.91
ZNF549Q6P9A3 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.11□□□□□ -1.91
ZNF549Q6P9A3 AC073539.2-201ENST00000597113 165 ntBASIC3.11□□□□□ -1.91
ZNF549Q6P9A3 AC012119.1-201ENST00000603184 222 ntBASIC3.11□□□□□ -1.91
ZNF549Q6P9A3 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
ZNF549Q6P9A3 MIR15A-201ENST00000607334 83 ntBASIC3.11□□□□□ -1.91
ZNF549Q6P9A3 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.11□□□□□ -1.91
ZNF549Q6P9A3 MIR6128-201ENST00000615528 109 ntBASIC3.11□□□□□ -1.91
ZNF549Q6P9A3 7SK.10-201ENST00000621414 298 ntBASIC3.11□□□□□ -1.91
ZNF549Q6P9A3 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
ZNF549Q6P9A3 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
ZNF549Q6P9A3 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
ZNF549Q6P9A3 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
ZNF549Q6P9A3 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.1□□□□□ -1.91
ZNF549Q6P9A3 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.1□□□□□ -1.91
ZNF549Q6P9A3 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
ZNF549Q6P9A3 RNU6-288P-201ENST00000363690 104 ntBASIC3.1□□□□□ -1.91
ZNF549Q6P9A3 RNA5SP72-201ENST00000364442 117 ntBASIC3.1□□□□□ -1.91
ZNF549Q6P9A3 SNORA75B-201ENST00000384053 137 ntBASIC3.1□□□□□ -1.91
ZNF549Q6P9A3 RNU6-45P-201ENST00000384471 107 ntBASIC3.1□□□□□ -1.91
ZNF549Q6P9A3 Y_RNA.534-201ENST00000384599 112 ntBASIC3.1□□□□□ -1.91
ZNF549Q6P9A3 Y_RNA.594-201ENST00000410373 140 ntBASIC3.1□□□□□ -1.91
ZNF549Q6P9A3 RNU2-37P-201ENST00000410695 177 ntBASIC3.1□□□□□ -1.91
ZNF549Q6P9A3 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.1□□□□□ -1.91
ZNF549Q6P9A3 AC079780.1-201ENST00000428259 207 ntBASIC3.1□□□□□ -1.91
ZNF549Q6P9A3 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.1□□□□□ -1.91
ZNF549Q6P9A3 AL160004.2-201ENST00000432935 350 ntBASIC3.1□□□□□ -1.91
ZNF549Q6P9A3 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.1□□□□□ -1.91
ZNF549Q6P9A3 AL360271.2-201ENST00000447710 161 ntBASIC3.1□□□□□ -1.91
ZNF549Q6P9A3 RPL21P41-201ENST00000459863 264 ntBASIC3.1□□□□□ -1.91
ZNF549Q6P9A3 RPL23AP62-201ENST00000463396 453 ntBASIC3.1□□□□□ -1.91
ZNF549Q6P9A3 AC110794.1-201ENST00000505816 425 ntBASIC3.1□□□□□ -1.91
ZNF549Q6P9A3 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.1□□□□□ -1.91
ZNF549Q6P9A3 RNU6-323P-201ENST00000521915 107 ntBASIC3.1□□□□□ -1.91
ZNF549Q6P9A3 ERHP1-201ENST00000523006 310 ntBASIC3.1□□□□□ -1.91
ZNF549Q6P9A3 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.1□□□□□ -1.91
ZNF549Q6P9A3 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.1□□□□□ -1.91
ZNF549Q6P9A3 AC009229.3-201ENST00000608056 282 ntBASIC3.1□□□□□ -1.91
ZNF549Q6P9A3 AC012531.5-201ENST00000611375 151 ntBASIC3.1□□□□□ -1.91
ZNF549Q6P9A3 MIR7112-201ENST00000616126 65 ntBASIC3.1□□□□□ -1.91
ZNF549Q6P9A3 AC007485.1-201ENST00000616755 206 ntBASIC3.1□□□□□ -1.91
ZNF549Q6P9A3 AC092608.2-201ENST00000624427 218 ntBASIC3.1□□□□□ -1.91
ZNF549Q6P9A3 AL078596.1-201ENST00000624856 447 ntBASIC3.1□□□□□ -1.91
ZNF549Q6P9A3 MIR4275-201ENST00000636486 87 ntBASIC3.1□□□□□ -1.91
ZNF549Q6P9A3 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
ZNF549Q6P9A3 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
ZNF549Q6P9A3 Y_RNA.158-201ENST00000363651 101 ntBASIC3.09□□□□□ -1.91
ZNF549Q6P9A3 Y_RNA.252-201ENST00000364556 101 ntBASIC3.09□□□□□ -1.91
ZNF549Q6P9A3 RNA5SP267-201ENST00000364893 126 ntBASIC3.09□□□□□ -1.91
ZNF549Q6P9A3 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
ZNF549Q6P9A3 RNU6-629P-201ENST00000384061 103 ntBASIC3.09□□□□□ -1.91
ZNF549Q6P9A3 SNORA7.4-201ENST00000384249 137 ntBASIC3.09□□□□□ -1.91
ZNF549Q6P9A3 MIR34B-201ENST00000385076 84 ntBASIC3.09□□□□□ -1.91
ZNF549Q6P9A3 SNORA75.6-201ENST00000391318 127 ntBASIC3.09□□□□□ -1.91
ZNF549Q6P9A3 RNU6-985P-201ENST00000410182 104 ntBASIC3.09□□□□□ -1.91
ZNF549Q6P9A3 RNU6-1050P-201ENST00000410388 107 ntBASIC3.09□□□□□ -1.91
ZNF549Q6P9A3 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.09□□□□□ -1.91
ZNF549Q6P9A3 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.09□□□□□ -1.91
ZNF549Q6P9A3 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.09□□□□□ -1.91
ZNF549Q6P9A3 AL591212.2-201ENST00000433923 257 ntBASIC3.09□□□□□ -1.91
ZNF549Q6P9A3 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC3.09□□□□□ -1.91
ZNF549Q6P9A3 SNRPEP4-201ENST00000435815 279 ntBASIC3.09□□□□□ -1.91
ZNF549Q6P9A3 SNORD5.1-201ENST00000458800 75 ntBASIC3.09□□□□□ -1.91
ZNF549Q6P9A3 snoU13.22-201ENST00000459428 104 ntBASIC3.09□□□□□ -1.91
ZNF549Q6P9A3 RPL9P32-201ENST00000464118 620 ntBASIC3.09□□□□□ -1.91
ZNF549Q6P9A3 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.09□□□□□ -1.91
ZNF549Q6P9A3 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.09□□□□□ -1.91
ZNF549Q6P9A3 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.09□□□□□ -1.91
ZNF549Q6P9A3 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.09□□□□□ -1.91
ZNF549Q6P9A3 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.09□□□□□ -1.91
ZNF549Q6P9A3 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
ZNF549Q6P9A3 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
ZNF549Q6P9A3 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.09□□□□□ -1.91
ZNF549Q6P9A3 MIR4503-201ENST00000582187 83 ntBASIC3.09□□□□□ -1.91
ZNF549Q6P9A3 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.09□□□□□ -1.91
ZNF549Q6P9A3 SRGNP1-201ENST00000603392 451 ntBASIC3.09□□□□□ -1.91
ZNF549Q6P9A3 AC002044.1-201ENST00000606707 158 ntBASIC3.09□□□□□ -1.91
ZNF549Q6P9A3 AL132822.1-201ENST00000617063 513 ntBASIC3.09□□□□□ -1.91
ZNF549Q6P9A3 PLCE1P1-201ENST00000622094 305 ntBASIC3.09□□□□□ -1.91
ZNF549Q6P9A3 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.09□□□□□ -1.91
ZNF549Q6P9A3 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
ZNF549Q6P9A3 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
ZNF549Q6P9A3 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.09□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms