Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
VARS2Q5ST30 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
VARS2Q5ST30 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.48□□□□□ -1.53
VARS2Q5ST30 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
VARS2Q5ST30 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
VARS2Q5ST30 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
VARS2Q5ST30 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.48□□□□□ -1.53
VARS2Q5ST30 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VARS2Q5ST30 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
VARS2Q5ST30 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
VARS2Q5ST30 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
VARS2Q5ST30 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.47□□□□□ -1.53
VARS2Q5ST30 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.47□□□□□ -1.53
VARS2Q5ST30 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.47□□□□□ -1.53
VARS2Q5ST30 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
VARS2Q5ST30 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
VARS2Q5ST30 RNA5SP87-201ENST00000384155 118 ntBASIC5.47□□□□□ -1.53
VARS2Q5ST30 MIR1250-201ENST00000408098 113 ntBASIC5.47□□□□□ -1.53
VARS2Q5ST30 AC078809.1-201ENST00000427601 140 ntBASIC5.47□□□□□ -1.53
VARS2Q5ST30 RN7SL814P-201ENST00000487715 300 ntBASIC5.47□□□□□ -1.53
VARS2Q5ST30 AC117454.1-201ENST00000491120 168 ntBASIC5.47□□□□□ -1.53
VARS2Q5ST30 RN7SL591P-201ENST00000496150 292 ntBASIC5.47□□□□□ -1.53
VARS2Q5ST30 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC5.47□□□□□ -1.53
VARS2Q5ST30 COX6B1P5-201ENST00000509843 249 ntBASIC5.47□□□□□ -1.53
VARS2Q5ST30 SNORA31.8-201ENST00000516327 108 ntBASIC5.47□□□□□ -1.53
VARS2Q5ST30 AC068339.1-201ENST00000526965 141 ntBASIC5.47□□□□□ -1.53
VARS2Q5ST30 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.47□□□□□ -1.53
VARS2Q5ST30 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC5.47□□□□□ -1.53
VARS2Q5ST30 AC025754.2-201ENST00000606491 432 ntBASIC5.47□□□□□ -1.53
VARS2Q5ST30 AC087385.3-201ENST00000620477 187 ntBASIC5.47□□□□□ -1.53
VARS2Q5ST30 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC5.47□□□□□ -1.53
VARS2Q5ST30 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
VARS2Q5ST30 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.47□□□□□ -1.53
VARS2Q5ST30 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
VARS2Q5ST30 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
VARS2Q5ST30 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
VARS2Q5ST30 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
VARS2Q5ST30 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
VARS2Q5ST30 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
VARS2Q5ST30 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.46□□□□□ -1.54
VARS2Q5ST30 RNU6-249P-201ENST00000363016 102 ntBASIC5.46□□□□□ -1.54
VARS2Q5ST30 RN7SKP145-201ENST00000363291 303 ntBASIC5.46□□□□□ -1.54
VARS2Q5ST30 RNA5SP428-201ENST00000365129 132 ntBASIC5.46□□□□□ -1.54
VARS2Q5ST30 Y_RNA.362-201ENST00000365518 110 ntBASIC5.46□□□□□ -1.54
VARS2Q5ST30 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
VARS2Q5ST30 SNORA70.6-201ENST00000383934 134 ntBASIC5.46□□□□□ -1.54
VARS2Q5ST30 U1.1-201ENST00000384101 164 ntBASIC5.46□□□□□ -1.54
VARS2Q5ST30 SNORA26.3-201ENST00000391119 136 ntBASIC5.46□□□□□ -1.54
VARS2Q5ST30 RNA5SP496-201ENST00000391240 109 ntBASIC5.46□□□□□ -1.54
VARS2Q5ST30 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
VARS2Q5ST30 AL358232.1-201ENST00000448030 501 ntBASIC5.46□□□□□ -1.54
VARS2Q5ST30 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
VARS2Q5ST30 RN7SL244P-201ENST00000493405 297 ntBASIC5.46□□□□□ -1.54
VARS2Q5ST30 RPL30P5-201ENST00000494923 336 ntBASIC5.46□□□□□ -1.54
VARS2Q5ST30 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC5.46□□□□□ -1.54
VARS2Q5ST30 RNU6-1299P-201ENST00000516316 100 ntBASIC5.46□□□□□ -1.54
VARS2Q5ST30 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.46□□□□□ -1.54
VARS2Q5ST30 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.46□□□□□ -1.54
VARS2Q5ST30 AC006272.2-201ENST00000594725 163 ntBASIC5.46□□□□□ -1.54
VARS2Q5ST30 AP005432.2-201ENST00000608162 586 ntBASIC5.46□□□□□ -1.54
VARS2Q5ST30 AL359198.2-201ENST00000611836 194 ntBASIC5.46□□□□□ -1.54
VARS2Q5ST30 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.46□□□□□ -1.54
VARS2Q5ST30 BMS1P21-201ENST00000634565 365 ntBASIC5.46□□□□□ -1.54
VARS2Q5ST30 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
VARS2Q5ST30 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
VARS2Q5ST30 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
VARS2Q5ST30 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
VARS2Q5ST30 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
VARS2Q5ST30 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
VARS2Q5ST30 AL121839.2-201ENST00000565058 6943 ntBASIC5.46□□□□□ -1.54
VARS2Q5ST30 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.45□□□□□ -1.54
VARS2Q5ST30 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.45□□□□□ -1.54
VARS2Q5ST30 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.45□□□□□ -1.54
VARS2Q5ST30 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
VARS2Q5ST30 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
VARS2Q5ST30 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
VARS2Q5ST30 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
VARS2Q5ST30 OFD1P6Y-202ENST00000451061 2724 ntBASIC5.45□□□□□ -1.54
VARS2Q5ST30 MIR181B1-201ENST00000385240 110 ntBASIC5.45□□□□□ -1.54
VARS2Q5ST30 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
VARS2Q5ST30 SNORA48.4-201ENST00000391089 134 ntBASIC5.45□□□□□ -1.54
VARS2Q5ST30 COX6B1P1-201ENST00000415962 213 ntBASIC5.45□□□□□ -1.54
VARS2Q5ST30 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC5.45□□□□□ -1.54
VARS2Q5ST30 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.45□□□□□ -1.54
VARS2Q5ST30 AC006517.1-201ENST00000480485 328 ntBASIC5.45□□□□□ -1.54
VARS2Q5ST30 AC008033.2-201ENST00000542626 177 ntBASIC5.45□□□□□ -1.54
VARS2Q5ST30 ATP5J2P6-201ENST00000565203 266 ntBASIC5.45□□□□□ -1.54
VARS2Q5ST30 AC209154.1-201ENST00000582156 337 ntBASIC5.45□□□□□ -1.54
VARS2Q5ST30 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.45□□□□□ -1.54
VARS2Q5ST30 AL020997.2-201ENST00000602607 184 ntBASIC5.45□□□□□ -1.54
VARS2Q5ST30 AC090132.2-201ENST00000615881 347 ntBASIC5.45□□□□□ -1.54
VARS2Q5ST30 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.45□□□□□ -1.54
VARS2Q5ST30 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
VARS2Q5ST30 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
VARS2Q5ST30 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
VARS2Q5ST30 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
VARS2Q5ST30 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
VARS2Q5ST30 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.45□□□□□ -1.54
VARS2Q5ST30 SCARNA15-201ENST00000607520 4325 ntBASIC5.44□□□□□ -1.54
VARS2Q5ST30 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms