Protein–RNA interactions for Protein: Q5SRH9

TTC39A, Tetratricopeptide repeat protein 39A, humanhuman

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39AQ5SRH9 RNU2-52P-201ENST00000410680 190 ntBASIC3.34□□□□□ -1.87
TTC39AQ5SRH9 RNA5SP21-201ENST00000410917 96 ntBASIC3.34□□□□□ -1.87
TTC39AQ5SRH9 RNU6-387P-201ENST00000411331 105 ntBASIC3.34□□□□□ -1.87
TTC39AQ5SRH9 AC009161.1-201ENST00000417306 376 ntBASIC3.34□□□□□ -1.87
TTC39AQ5SRH9 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.34□□□□□ -1.87
TTC39AQ5SRH9 AL591212.2-201ENST00000433923 257 ntBASIC3.34□□□□□ -1.87
TTC39AQ5SRH9 TAAR7P-201ENST00000436141 242 ntBASIC3.34□□□□□ -1.87
TTC39AQ5SRH9 SNORD109B-201ENST00000458961 67 ntBASIC3.34□□□□□ -1.87
TTC39AQ5SRH9 SCARNA18-201ENST00000459004 134 ntBASIC3.34□□□□□ -1.87
TTC39AQ5SRH9 SNORD109A-201ENST00000459128 67 ntBASIC3.34□□□□□ -1.87
TTC39AQ5SRH9 RPL23AP11-201ENST00000475260 469 ntBASIC3.34□□□□□ -1.87
TTC39AQ5SRH9 RNU4-49P-201ENST00000516080 140 ntBASIC3.34□□□□□ -1.87
TTC39AQ5SRH9 RNU7-30P-201ENST00000516835 62 ntBASIC3.34□□□□□ -1.87
TTC39AQ5SRH9 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.34□□□□□ -1.87
TTC39AQ5SRH9 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.34□□□□□ -1.87
TTC39AQ5SRH9 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.34□□□□□ -1.87
TTC39AQ5SRH9 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.34□□□□□ -1.87
TTC39AQ5SRH9 CTHRC1P1-201ENST00000605383 469 ntBASIC3.34□□□□□ -1.87
TTC39AQ5SRH9 AC022893.3-201ENST00000607665 437 ntBASIC3.34□□□□□ -1.87
TTC39AQ5SRH9 AC092807.2-201ENST00000609367 243 ntBASIC3.34□□□□□ -1.87
TTC39AQ5SRH9 MTND5P42-201ENST00000637720 498 ntBASIC3.34□□□□□ -1.87
TTC39AQ5SRH9 AC103710.2-202ENST00000641454 2853 ntBASIC3.34□□□□□ -1.87
TTC39AQ5SRH9 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.34□□□□□ -1.88
TTC39AQ5SRH9 AL355596.1-201ENST00000565399 3996 ntBASIC3.34□□□□□ -1.88
TTC39AQ5SRH9 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
TTC39AQ5SRH9 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.33□□□□□ -1.88
TTC39AQ5SRH9 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.33□□□□□ -1.88
TTC39AQ5SRH9 RNU6-1127P-201ENST00000384580 107 ntBASIC3.33□□□□□ -1.88
TTC39AQ5SRH9 SNORA1.3-201ENST00000384676 136 ntBASIC3.33□□□□□ -1.88
TTC39AQ5SRH9 AL356432.1-201ENST00000405809 419 ntBASIC3.33□□□□□ -1.88
TTC39AQ5SRH9 MIR1289-1-201ENST00000408836 144 ntBASIC3.33□□□□□ -1.88
TTC39AQ5SRH9 RNA5SP38-201ENST00000410750 119 ntBASIC3.33□□□□□ -1.88
TTC39AQ5SRH9 RPS12P24-201ENST00000412619 387 ntBASIC3.33□□□□□ -1.88
TTC39AQ5SRH9 BMS1P22-201ENST00000414726 313 ntBASIC3.33□□□□□ -1.88
TTC39AQ5SRH9 CALM2P2-201ENST00000428512 440 ntBASIC3.33□□□□□ -1.88
TTC39AQ5SRH9 RPS29P6-201ENST00000438196 145 ntBASIC3.33□□□□□ -1.88
TTC39AQ5SRH9 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC3.33□□□□□ -1.88
TTC39AQ5SRH9 PRPS1P1-201ENST00000445305 876 ntBASIC3.33□□□□□ -1.88
TTC39AQ5SRH9 AC104058.1-201ENST00000448028 297 ntBASIC3.33□□□□□ -1.88
TTC39AQ5SRH9 AMD1P1-201ENST00000457220 922 ntBASIC3.33□□□□□ -1.88
TTC39AQ5SRH9 RPL21P93-201ENST00000480465 489 ntBASIC3.33□□□□□ -1.88
TTC39AQ5SRH9 AC091885.1-201ENST00000506658 268 ntBASIC3.33□□□□□ -1.88
TTC39AQ5SRH9 MTND3P22-201ENST00000510932 243 ntBASIC3.33□□□□□ -1.88
TTC39AQ5SRH9 SNORA31.21-201ENST00000517180 77 ntBASIC3.33□□□□□ -1.88
TTC39AQ5SRH9 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.33□□□□□ -1.88
TTC39AQ5SRH9 PSMA3P-201ENST00000555485 635 ntBASIC3.33□□□□□ -1.88
TTC39AQ5SRH9 RPS3AP23-202ENST00000574601 686 ntBASIC3.33□□□□□ -1.88
TTC39AQ5SRH9 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.33□□□□□ -1.88
TTC39AQ5SRH9 AL138889.2-201ENST00000603883 242 ntBASIC3.33□□□□□ -1.88
TTC39AQ5SRH9 AC021646.1-201ENST00000605469 484 ntBASIC3.33□□□□□ -1.88
TTC39AQ5SRH9 AC005046.1-201ENST00000608515 625 ntBASIC3.33□□□□□ -1.88
TTC39AQ5SRH9 AL359697.1-201ENST00000624879 587 ntBASIC3.33□□□□□ -1.88
TTC39AQ5SRH9 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.33□□□□□ -1.88
TTC39AQ5SRH9 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
TTC39AQ5SRH9 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
TTC39AQ5SRH9 HSPA8P4-201ENST00000511877 1920 ntBASIC3.32□□□□□ -1.88
TTC39AQ5SRH9 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TTC39AQ5SRH9 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.32□□□□□ -1.88
TTC39AQ5SRH9 AC108206.1-201ENST00000570186 4159 ntBASIC3.32□□□□□ -1.88
TTC39AQ5SRH9 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TTC39AQ5SRH9 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TTC39AQ5SRH9 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TTC39AQ5SRH9 AC062016.1-201ENST00000355719 319 ntBASIC3.32□□□□□ -1.88
TTC39AQ5SRH9 RNU6-831P-201ENST00000384548 107 ntBASIC3.32□□□□□ -1.88
TTC39AQ5SRH9 AL592114.1-201ENST00000403842 483 ntBASIC3.32□□□□□ -1.88
TTC39AQ5SRH9 RNA5SP184-201ENST00000411071 108 ntBASIC3.32□□□□□ -1.88
TTC39AQ5SRH9 AL513331.1-201ENST00000411908 397 ntBASIC3.32□□□□□ -1.88
TTC39AQ5SRH9 AL139281.1-201ENST00000422120 335 ntBASIC3.32□□□□□ -1.88
TTC39AQ5SRH9 HMGB1P27-201ENST00000431429 603 ntBASIC3.32□□□□□ -1.88
TTC39AQ5SRH9 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.32□□□□□ -1.88
TTC39AQ5SRH9 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.32□□□□□ -1.88
TTC39AQ5SRH9 MTND4LP16-201ENST00000440828 295 ntBASIC3.32□□□□□ -1.88
TTC39AQ5SRH9 MRPL50P4-201ENST00000446432 475 ntBASIC3.32□□□□□ -1.88
TTC39AQ5SRH9 RPS15AP27-201ENST00000449183 343 ntBASIC3.32□□□□□ -1.88
TTC39AQ5SRH9 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC3.32□□□□□ -1.88
TTC39AQ5SRH9 RNU6-953P-201ENST00000459154 107 ntBASIC3.32□□□□□ -1.88
TTC39AQ5SRH9 UBE2DNL-203ENST00000474922 222 ntBASIC3.32□□□□□ -1.88
TTC39AQ5SRH9 RPL31P60-201ENST00000478450 367 ntBASIC3.32□□□□□ -1.88
TTC39AQ5SRH9 AC103851.1-201ENST00000506833 274 ntBASIC3.32□□□□□ -1.88
TTC39AQ5SRH9 RNU6-1256P-201ENST00000516539 103 ntBASIC3.32□□□□□ -1.88
TTC39AQ5SRH9 RN7SKP282-201ENST00000516824 299 ntBASIC3.32□□□□□ -1.88
TTC39AQ5SRH9 RNA5SP471-201ENST00000516971 106 ntBASIC3.32□□□□□ -1.88
TTC39AQ5SRH9 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.32□□□□□ -1.88
TTC39AQ5SRH9 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.32□□□□□ -1.88
TTC39AQ5SRH9 AC087241.2-201ENST00000535801 324 ntBASIC3.32□□□□□ -1.88
TTC39AQ5SRH9 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.32□□□□□ -1.88
TTC39AQ5SRH9 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.32□□□□□ -1.88
TTC39AQ5SRH9 AC002545.1-201ENST00000592511 181 ntBASIC3.32□□□□□ -1.88
TTC39AQ5SRH9 AC013553.2-201ENST00000604244 589 ntBASIC3.32□□□□□ -1.88
TTC39AQ5SRH9 AL359547.2-201ENST00000615810 418 ntBASIC3.32□□□□□ -1.88
TTC39AQ5SRH9 AP003400.5-201ENST00000624827 617 ntBASIC3.32□□□□□ -1.88
TTC39AQ5SRH9 AC233263.6-201ENST00000631132 1963 ntBASIC3.32□□□□□ -1.88
TTC39AQ5SRH9 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
TTC39AQ5SRH9 UBE2L2-201ENST00000254302 429 ntBASIC3.31□□□□□ -1.88
TTC39AQ5SRH9 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
TTC39AQ5SRH9 RNU4-73P-201ENST00000363164 141 ntBASIC3.31□□□□□ -1.88
TTC39AQ5SRH9 RNU6-799P-201ENST00000363567 107 ntBASIC3.31□□□□□ -1.88
TTC39AQ5SRH9 Y_RNA.167-201ENST00000363735 109 ntBASIC3.31□□□□□ -1.88
TTC39AQ5SRH9 RNU6-512P-201ENST00000364438 103 ntBASIC3.31□□□□□ -1.88
TTC39AQ5SRH9 MIR9-1-201ENST00000385198 89 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms