Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC1.94□□□□□ -2.1
RFX4Q33E94 SNRPFP4-201ENST00000456366 242 ntBASIC1.94□□□□□ -2.1
RFX4Q33E94 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.94□□□□□ -2.1
RFX4Q33E94 BET1P1-201ENST00000482276 359 ntBASIC1.94□□□□□ -2.1
RFX4Q33E94 RBBP4P6-201ENST00000508098 202 ntBASIC1.94□□□□□ -2.1
RFX4Q33E94 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.94□□□□□ -2.1
RFX4Q33E94 AC117522.2-201ENST00000510049 657 ntBASIC1.94□□□□□ -2.1
RFX4Q33E94 AC008413.1-201ENST00000511864 177 ntBASIC1.94□□□□□ -2.1
RFX4Q33E94 RNU6-123P-201ENST00000516163 102 ntBASIC1.94□□□□□ -2.1
RFX4Q33E94 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.94□□□□□ -2.1
RFX4Q33E94 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.94□□□□□ -2.1
RFX4Q33E94 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.94□□□□□ -2.1
RFX4Q33E94 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1.94□□□□□ -2.1
RFX4Q33E94 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.94□□□□□ -2.1
RFX4Q33E94 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.94□□□□□ -2.1
RFX4Q33E94 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.94□□□□□ -2.1
RFX4Q33E94 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.94□□□□□ -2.1
RFX4Q33E94 ANP32BP3-201ENST00000559213 706 ntBASIC1.94□□□□□ -2.1
RFX4Q33E94 AC025678.1-201ENST00000567861 338 ntBASIC1.94□□□□□ -2.1
RFX4Q33E94 MIR4782-201ENST00000577987 79 ntBASIC1.94□□□□□ -2.1
RFX4Q33E94 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.94□□□□□ -2.1
RFX4Q33E94 NRBF2P1-201ENST00000587407 859 ntBASIC1.94□□□□□ -2.1
RFX4Q33E94 AC068276.1-201ENST00000605793 379 ntBASIC1.94□□□□□ -2.1
RFX4Q33E94 AC012409.4-201ENST00000612923 249 ntBASIC1.94□□□□□ -2.1
RFX4Q33E94 AL133173.2-201ENST00000614270 90 ntBASIC1.94□□□□□ -2.1
RFX4Q33E94 AC010378.1-201ENST00000619270 362 ntBASIC1.94□□□□□ -2.1
RFX4Q33E94 uc_338.20-201ENST00000621563 178 ntBASIC1.94□□□□□ -2.1
RFX4Q33E94 AL359851.1-201ENST00000569460 4997 ntBASIC1.94□□□□□ -2.1
RFX4Q33E94 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
RFX4Q33E94 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
RFX4Q33E94 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
RFX4Q33E94 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.93□□□□□ -2.1
RFX4Q33E94 Y_RNA.33-201ENST00000362591 102 ntBASIC1.93□□□□□ -2.1
RFX4Q33E94 RNU6-61P-201ENST00000365528 109 ntBASIC1.93□□□□□ -2.1
RFX4Q33E94 RNU6-1083P-201ENST00000384022 107 ntBASIC1.93□□□□□ -2.1
RFX4Q33E94 CISD1P1-201ENST00000393907 327 ntBASIC1.93□□□□□ -2.1
RFX4Q33E94 UBE2V1P2-201ENST00000397758 440 ntBASIC1.93□□□□□ -2.1
RFX4Q33E94 RNU2-39P-201ENST00000410604 198 ntBASIC1.93□□□□□ -2.1
RFX4Q33E94 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
RFX4Q33E94 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.93□□□□□ -2.1
RFX4Q33E94 CYCSP48-201ENST00000417124 323 ntBASIC1.93□□□□□ -2.1
RFX4Q33E94 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.93□□□□□ -2.1
RFX4Q33E94 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.93□□□□□ -2.1
RFX4Q33E94 CALM2P2-201ENST00000428512 440 ntBASIC1.93□□□□□ -2.1
RFX4Q33E94 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC1.93□□□□□ -2.1
RFX4Q33E94 AL353706.1-201ENST00000436728 494 ntBASIC1.93□□□□□ -2.1
RFX4Q33E94 GPM6BP3-201ENST00000442797 145 ntBASIC1.93□□□□□ -2.1
RFX4Q33E94 AL078601.1-201ENST00000444542 271 ntBASIC1.93□□□□□ -2.1
RFX4Q33E94 HIGD1AP2-201ENST00000446367 280 ntBASIC1.93□□□□□ -2.1
RFX4Q33E94 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.93□□□□□ -2.1
RFX4Q33E94 AL033528.1-201ENST00000453780 140 ntBASIC1.93□□□□□ -2.1
RFX4Q33E94 SNORD42A-201ENST00000459584 64 ntBASIC1.93□□□□□ -2.1
RFX4Q33E94 AP001324.2-201ENST00000461163 319 ntBASIC1.93□□□□□ -2.1
RFX4Q33E94 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.93□□□□□ -2.1
RFX4Q33E94 RN7SL274P-201ENST00000492268 272 ntBASIC1.93□□□□□ -2.1
RFX4Q33E94 MTND4P2-201ENST00000507767 1203 ntBASIC1.93□□□□□ -2.1
RFX4Q33E94 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC1.93□□□□□ -2.1
RFX4Q33E94 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.93□□□□□ -2.1
RFX4Q33E94 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC1.93□□□□□ -2.1
RFX4Q33E94 AC010186.2-204ENST00000537668 439 ntBASIC1.93□□□□□ -2.1
RFX4Q33E94 OSBPL9P5-201ENST00000542581 171 ntBASIC1.93□□□□□ -2.1
RFX4Q33E94 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.93□□□□□ -2.1
RFX4Q33E94 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.93□□□□□ -2.1
RFX4Q33E94 DEFB131E-202ENST00000602581 683 ntBASIC1.93□□□□□ -2.1
RFX4Q33E94 AL022154.1-201ENST00000604698 785 ntBASIC1.93□□□□□ -2.1
RFX4Q33E94 AL158032.1-201ENST00000605401 106 ntBASIC1.93□□□□□ -2.1
RFX4Q33E94 AL161423.1-201ENST00000613700 262 ntBASIC1.93□□□□□ -2.1
RFX4Q33E94 AC108479.2-201ENST00000617314 601 ntBASIC1.93□□□□□ -2.1
RFX4Q33E94 AC024940.5-201ENST00000622889 474 ntBASIC1.93□□□□□ -2.1
RFX4Q33E94 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC1.93□□□□□ -2.1
RFX4Q33E94 AC110994.2-201ENST00000635481 492 ntBASIC1.93□□□□□ -2.1
RFX4Q33E94 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
RFX4Q33E94 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.92□□□□□ -2.1
RFX4Q33E94 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
RFX4Q33E94 RNU6-641P-201ENST00000384006 107 ntBASIC1.92□□□□□ -2.1
RFX4Q33E94 SNORD116-8-201ENST00000384365 95 ntBASIC1.92□□□□□ -2.1
RFX4Q33E94 MIR17-201ENST00000385012 84 ntBASIC1.92□□□□□ -2.1
RFX4Q33E94 AF228730.1-201ENST00000397972 663 ntBASIC1.92□□□□□ -2.1
RFX4Q33E94 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.92□□□□□ -2.1
RFX4Q33E94 USP9YP6-201ENST00000413550 854 ntBASIC1.92□□□□□ -2.1
RFX4Q33E94 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.92□□□□□ -2.1
RFX4Q33E94 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.92□□□□□ -2.1
RFX4Q33E94 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.92□□□□□ -2.1
RFX4Q33E94 AL160275.3-201ENST00000423876 471 ntBASIC1.92□□□□□ -2.1
RFX4Q33E94 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.92□□□□□ -2.1
RFX4Q33E94 RPL31P35-201ENST00000431058 377 ntBASIC1.92□□□□□ -2.1
RFX4Q33E94 CETN4P-201ENST00000432407 469 ntBASIC1.92□□□□□ -2.1
RFX4Q33E94 MICF-203ENST00000432679 129 ntBASIC1.92□□□□□ -2.1
RFX4Q33E94 AL451074.3-201ENST00000437709 472 ntBASIC1.92□□□□□ -2.1
RFX4Q33E94 AC073614.1-201ENST00000438690 650 ntBASIC1.92□□□□□ -2.1
RFX4Q33E94 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.92□□□□□ -2.1
RFX4Q33E94 AL583843.1-201ENST00000456070 346 ntBASIC1.92□□□□□ -2.1
RFX4Q33E94 RNA5SP269-201ENST00000459032 137 ntBASIC1.92□□□□□ -2.1
RFX4Q33E94 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
RFX4Q33E94 AKIRIN2P1-201ENST00000505898 352 ntBASIC1.92□□□□□ -2.1
RFX4Q33E94 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.92□□□□□ -2.1
RFX4Q33E94 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.92□□□□□ -2.1
RFX4Q33E94 Vault.3-201ENST00000516676 95 ntBASIC1.92□□□□□ -2.1
RFX4Q33E94 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.92□□□□□ -2.1
RFX4Q33E94 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms