Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.8□□□□□ -1.8
ATP2B3Q16720 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.8□□□□□ -1.8
ATP2B3Q16720 AC138761.3-201ENST00000579993 334 ntBASIC3.8□□□□□ -1.8
ATP2B3Q16720 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.8□□□□□ -1.8
ATP2B3Q16720 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.8□□□□□ -1.8
ATP2B3Q16720 AL022345.1-201ENST00000607292 135 ntBASIC3.8□□□□□ -1.8
ATP2B3Q16720 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.8□□□□□ -1.8
ATP2B3Q16720 AC022418.1-201ENST00000624118 445 ntBASIC3.8□□□□□ -1.8
ATP2B3Q16720 AC008264.2-201ENST00000610193 3731 ntBASIC3.8□□□□□ -1.8
ATP2B3Q16720 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
ATP2B3Q16720 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
ATP2B3Q16720 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
ATP2B3Q16720 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.8□□□□□ -1.8
ATP2B3Q16720 AC093908.1-201ENST00000623125 8092 ntBASIC3.79□□□□□ -1.8
ATP2B3Q16720 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
ATP2B3Q16720 AC093831.2-201ENST00000624393 3427 ntBASIC3.79□□□□□ -1.8
ATP2B3Q16720 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.79□□□□□ -1.8
ATP2B3Q16720 AL136164.4-201ENST00000625013 2135 ntBASIC3.79□□□□□ -1.8
ATP2B3Q16720 SNORD3E-201ENST00000362899 217 ntBASIC3.79□□□□□ -1.8
ATP2B3Q16720 Y_RNA.384-201ENST00000383909 102 ntBASIC3.79□□□□□ -1.8
ATP2B3Q16720 Y_RNA.387-201ENST00000383918 102 ntBASIC3.79□□□□□ -1.8
ATP2B3Q16720 RNU6-1013P-201ENST00000384180 107 ntBASIC3.79□□□□□ -1.8
ATP2B3Q16720 UBA52P6-201ENST00000399822 382 ntBASIC3.79□□□□□ -1.8
ATP2B3Q16720 AP000567.1-201ENST00000406413 156 ntBASIC3.79□□□□□ -1.8
ATP2B3Q16720 RN7SKP220-201ENST00000410611 288 ntBASIC3.79□□□□□ -1.8
ATP2B3Q16720 SNORD19B-201ENST00000459623 84 ntBASIC3.79□□□□□ -1.8
ATP2B3Q16720 MTND5P5-201ENST00000503764 376 ntBASIC3.79□□□□□ -1.8
ATP2B3Q16720 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.79□□□□□ -1.8
ATP2B3Q16720 RN7SKP24-201ENST00000515888 284 ntBASIC3.79□□□□□ -1.8
ATP2B3Q16720 RNU1-143P-201ENST00000516296 146 ntBASIC3.79□□□□□ -1.8
ATP2B3Q16720 RNU6-1069P-201ENST00000516612 133 ntBASIC3.79□□□□□ -1.8
ATP2B3Q16720 RNA5SP454-201ENST00000517231 127 ntBASIC3.79□□□□□ -1.8
ATP2B3Q16720 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC3.79□□□□□ -1.8
ATP2B3Q16720 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.79□□□□□ -1.8
ATP2B3Q16720 RNU6-323P-201ENST00000521915 107 ntBASIC3.79□□□□□ -1.8
ATP2B3Q16720 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC3.79□□□□□ -1.8
ATP2B3Q16720 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.79□□□□□ -1.8
ATP2B3Q16720 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.79□□□□□ -1.8
ATP2B3Q16720 MTCO3P23-201ENST00000561363 289 ntBASIC3.79□□□□□ -1.8
ATP2B3Q16720 MIR3921-201ENST00000577308 85 ntBASIC3.79□□□□□ -1.8
ATP2B3Q16720 AP002826.1-201ENST00000608835 315 ntBASIC3.79□□□□□ -1.8
ATP2B3Q16720 U1.23-201ENST00000610293 146 ntBASIC3.79□□□□□ -1.8
ATP2B3Q16720 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.79□□□□□ -1.8
ATP2B3Q16720 RNU1-68P-201ENST00000615382 146 ntBASIC3.79□□□□□ -1.8
ATP2B3Q16720 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
ATP2B3Q16720 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.79□□□□□ -1.8
ATP2B3Q16720 U1.39-201ENST00000621562 146 ntBASIC3.79□□□□□ -1.8
ATP2B3Q16720 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
ATP2B3Q16720 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.79□□□□□ -1.8
ATP2B3Q16720 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.79□□□□□ -1.8
ATP2B3Q16720 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
ATP2B3Q16720 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.79□□□□□ -1.8
ATP2B3Q16720 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
ATP2B3Q16720 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
ATP2B3Q16720 MIR493-201ENST00000385254 89 ntBASIC3.78□□□□□ -1.8
ATP2B3Q16720 MIR325-201ENST00000385260 98 ntBASIC3.78□□□□□ -1.8
ATP2B3Q16720 Y_RNA.579-201ENST00000390939 94 ntBASIC3.78□□□□□ -1.8
ATP2B3Q16720 RPL21P3-201ENST00000395517 478 ntBASIC3.78□□□□□ -1.8
ATP2B3Q16720 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.78□□□□□ -1.8
ATP2B3Q16720 RPL7P37-201ENST00000425095 738 ntBASIC3.78□□□□□ -1.8
ATP2B3Q16720 PIGFP3-201ENST00000441918 722 ntBASIC3.78□□□□□ -1.8
ATP2B3Q16720 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.78□□□□□ -1.8
ATP2B3Q16720 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.78□□□□□ -1.8
ATP2B3Q16720 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.78□□□□□ -1.8
ATP2B3Q16720 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.78□□□□□ -1.8
ATP2B3Q16720 AC146507.2-201ENST00000460608 476 ntBASIC3.78□□□□□ -1.8
ATP2B3Q16720 KC877373.1-201ENST00000479066 408 ntBASIC3.78□□□□□ -1.8
ATP2B3Q16720 AC022493.1-201ENST00000492984 337 ntBASIC3.78□□□□□ -1.8
ATP2B3Q16720 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.78□□□□□ -1.8
ATP2B3Q16720 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.78□□□□□ -1.8
ATP2B3Q16720 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.78□□□□□ -1.8
ATP2B3Q16720 SNORA25.17-201ENST00000517184 124 ntBASIC3.78□□□□□ -1.8
ATP2B3Q16720 AC009812.2-201ENST00000517657 457 ntBASIC3.78□□□□□ -1.8
ATP2B3Q16720 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.78□□□□□ -1.8
ATP2B3Q16720 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.78□□□□□ -1.8
ATP2B3Q16720 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.78□□□□□ -1.8
ATP2B3Q16720 AC025423.5-201ENST00000550230 219 ntBASIC3.78□□□□□ -1.8
ATP2B3Q16720 SYF2P1-201ENST00000550658 413 ntBASIC3.78□□□□□ -1.8
ATP2B3Q16720 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.78□□□□□ -1.8
ATP2B3Q16720 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.78□□□□□ -1.8
ATP2B3Q16720 AC023043.2-201ENST00000589678 1026 ntBASIC3.78□□□□□ -1.8
ATP2B3Q16720 AL451007.1-201ENST00000595491 289 ntBASIC3.78□□□□□ -1.8
ATP2B3Q16720 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.78□□□□□ -1.8
ATP2B3Q16720 AL138726.1-201ENST00000614873 333 ntBASIC3.78□□□□□ -1.8
ATP2B3Q16720 MTND1P37-201ENST00000636562 264 ntBASIC3.78□□□□□ -1.8
ATP2B3Q16720 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
ATP2B3Q16720 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.78□□□□□ -1.8
ATP2B3Q16720 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
ATP2B3Q16720 ZNF807-201ENST00000328088 1707 ntBASIC3.78□□□□□ -1.8
ATP2B3Q16720 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.78□□□□□ -1.8
ATP2B3Q16720 ZNF519P1-201ENST00000449011 1626 ntBASIC3.77□□□□□ -1.81
ATP2B3Q16720 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
ATP2B3Q16720 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
ATP2B3Q16720 RNU6-266P-201ENST00000364225 107 ntBASIC3.77□□□□□ -1.81
ATP2B3Q16720 SNORA71.1-201ENST00000364523 117 ntBASIC3.77□□□□□ -1.81
ATP2B3Q16720 RNU1-140P-201ENST00000365040 165 ntBASIC3.77□□□□□ -1.81
ATP2B3Q16720 RNU6-370P-201ENST00000411008 104 ntBASIC3.77□□□□□ -1.81
ATP2B3Q16720 NCOR1P3-201ENST00000420479 303 ntBASIC3.77□□□□□ -1.81
ATP2B3Q16720 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC3.77□□□□□ -1.81
ATP2B3Q16720 MTCO2P12-201ENST00000427426 682 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms