Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 MIR4319-201ENST00000577285 85 ntBASIC2.06□□□□□ -2.08
RAB40BQ12829 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC2.06□□□□□ -2.08
RAB40BQ12829 AC026790.2-201ENST00000606282 430 ntBASIC2.06□□□□□ -2.08
RAB40BQ12829 AC103810.6-201ENST00000606708 136 ntBASIC2.06□□□□□ -2.08
RAB40BQ12829 RNU6-91P-201ENST00000607774 107 ntBASIC2.06□□□□□ -2.08
RAB40BQ12829 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.06□□□□□ -2.08
RAB40BQ12829 AC093648.1-201ENST00000623546 606 ntBASIC2.06□□□□□ -2.08
RAB40BQ12829 AL359740.1-201ENST00000624340 592 ntBASIC2.06□□□□□ -2.08
RAB40BQ12829 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.06□□□□□ -2.08
RAB40BQ12829 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.06□□□□□ -2.08
RAB40BQ12829 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.05□□□□□ -2.08
RAB40BQ12829 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
RAB40BQ12829 AC062016.1-201ENST00000355719 319 ntBASIC2.05□□□□□ -2.08
RAB40BQ12829 Y_RNA.201-201ENST00000364052 96 ntBASIC2.05□□□□□ -2.08
RAB40BQ12829 Y_RNA.367-201ENST00000365544 101 ntBASIC2.05□□□□□ -2.08
RAB40BQ12829 RNU1-52P-201ENST00000384190 164 ntBASIC2.05□□□□□ -2.08
RAB40BQ12829 RNU6-72P-201ENST00000384285 79 ntBASIC2.05□□□□□ -2.08
RAB40BQ12829 Y_RNA.576-201ENST00000384781 102 ntBASIC2.05□□□□□ -2.08
RAB40BQ12829 MIR196B-201ENST00000384852 84 ntBASIC2.05□□□□□ -2.08
RAB40BQ12829 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC2.05□□□□□ -2.08
RAB40BQ12829 EEF1A1P40-201ENST00000412883 573 ntBASIC2.05□□□□□ -2.08
RAB40BQ12829 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.05□□□□□ -2.08
RAB40BQ12829 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC2.05□□□□□ -2.08
RAB40BQ12829 MTND3P17-201ENST00000416968 344 ntBASIC2.05□□□□□ -2.08
RAB40BQ12829 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
RAB40BQ12829 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.05□□□□□ -2.08
RAB40BQ12829 RPS15AP28-201ENST00000435088 386 ntBASIC2.05□□□□□ -2.08
RAB40BQ12829 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.05□□□□□ -2.08
RAB40BQ12829 AC012308.1-201ENST00000451232 178 ntBASIC2.05□□□□□ -2.08
RAB40BQ12829 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.05□□□□□ -2.08
RAB40BQ12829 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC2.05□□□□□ -2.08
RAB40BQ12829 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
RAB40BQ12829 BET1P1-201ENST00000482276 359 ntBASIC2.05□□□□□ -2.08
RAB40BQ12829 MTAPP1-201ENST00000489154 819 ntBASIC2.05□□□□□ -2.08
RAB40BQ12829 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC2.05□□□□□ -2.08
RAB40BQ12829 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.05□□□□□ -2.08
RAB40BQ12829 RNU6-685P-201ENST00000517088 95 ntBASIC2.05□□□□□ -2.08
RAB40BQ12829 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.05□□□□□ -2.08
RAB40BQ12829 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC2.05□□□□□ -2.08
RAB40BQ12829 AP005902.1-201ENST00000521358 186 ntBASIC2.05□□□□□ -2.08
RAB40BQ12829 AP004607.1-201ENST00000524456 203 ntBASIC2.05□□□□□ -2.08
RAB40BQ12829 FAM92A1P1-201ENST00000528023 890 ntBASIC2.05□□□□□ -2.08
RAB40BQ12829 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC2.05□□□□□ -2.08
RAB40BQ12829 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.05□□□□□ -2.08
RAB40BQ12829 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.05□□□□□ -2.08
RAB40BQ12829 AL133241.1-201ENST00000556832 487 ntBASIC2.05□□□□□ -2.08
RAB40BQ12829 AL158211.1-201ENST00000566763 763 ntBASIC2.05□□□□□ -2.08
RAB40BQ12829 MIR5007-201ENST00000583098 95 ntBASIC2.05□□□□□ -2.08
RAB40BQ12829 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.05□□□□□ -2.08
RAB40BQ12829 AC064872.1-201ENST00000604823 1072 ntBASIC2.05□□□□□ -2.08
RAB40BQ12829 AL160394.1-201ENST00000624765 724 ntBASIC2.05□□□□□ -2.08
RAB40BQ12829 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
RAB40BQ12829 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.04□□□□□ -2.08
RAB40BQ12829 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
RAB40BQ12829 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
RAB40BQ12829 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
RAB40BQ12829 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
RAB40BQ12829 RPS4XP7-201ENST00000406274 780 ntBASIC2.04□□□□□ -2.08
RAB40BQ12829 RNU6-248P-201ENST00000410720 107 ntBASIC2.04□□□□□ -2.08
RAB40BQ12829 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC2.04□□□□□ -2.08
RAB40BQ12829 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.04□□□□□ -2.08
RAB40BQ12829 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.04□□□□□ -2.08
RAB40BQ12829 CALM2P2-201ENST00000428512 440 ntBASIC2.04□□□□□ -2.08
RAB40BQ12829 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
RAB40BQ12829 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC2.04□□□□□ -2.08
RAB40BQ12829 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.04□□□□□ -2.08
RAB40BQ12829 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.04□□□□□ -2.08
RAB40BQ12829 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC2.04□□□□□ -2.08
RAB40BQ12829 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.04□□□□□ -2.08
RAB40BQ12829 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.04□□□□□ -2.08
RAB40BQ12829 HIGD1AP2-201ENST00000446367 280 ntBASIC2.04□□□□□ -2.08
RAB40BQ12829 AL360271.2-201ENST00000447710 161 ntBASIC2.04□□□□□ -2.08
RAB40BQ12829 AC104058.1-201ENST00000448028 297 ntBASIC2.04□□□□□ -2.08
RAB40BQ12829 AC011753.1-201ENST00000451001 220 ntBASIC2.04□□□□□ -2.08
RAB40BQ12829 RPS27AP8-201ENST00000452665 445 ntBASIC2.04□□□□□ -2.08
RAB40BQ12829 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC2.04□□□□□ -2.08
RAB40BQ12829 KLF3P2-201ENST00000465138 268 ntBASIC2.04□□□□□ -2.08
RAB40BQ12829 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC2.04□□□□□ -2.08
RAB40BQ12829 AC140059.1-201ENST00000489238 361 ntBASIC2.04□□□□□ -2.08
RAB40BQ12829 HMGB1P30-201ENST00000492455 606 ntBASIC2.04□□□□□ -2.08
RAB40BQ12829 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.04□□□□□ -2.08
RAB40BQ12829 AC090255.1-201ENST00000495779 349 ntBASIC2.04□□□□□ -2.08
RAB40BQ12829 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC2.04□□□□□ -2.08
RAB40BQ12829 AC104806.1-201ENST00000508720 308 ntBASIC2.04□□□□□ -2.08
RAB40BQ12829 HSPA8P4-201ENST00000511877 1920 ntBASIC2.04□□□□□ -2.08
RAB40BQ12829 RNA5SP24-201ENST00000516478 95 ntBASIC2.04□□□□□ -2.08
RAB40BQ12829 RNA5SP82-201ENST00000516707 92 ntBASIC2.04□□□□□ -2.08
RAB40BQ12829 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.04□□□□□ -2.08
RAB40BQ12829 OR5AL2P-201ENST00000532185 920 ntBASIC2.04□□□□□ -2.08
RAB40BQ12829 CBX3P7-201ENST00000532876 502 ntBASIC2.04□□□□□ -2.08
RAB40BQ12829 AC007834.2-201ENST00000536310 343 ntBASIC2.04□□□□□ -2.08
RAB40BQ12829 EMP1-206ENST00000537612 505 ntTSL 3 BASIC2.04□□□□□ -2.08
RAB40BQ12829 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.04□□□□□ -2.08
RAB40BQ12829 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC2.04□□□□□ -2.08
RAB40BQ12829 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.04□□□□□ -2.08
RAB40BQ12829 MIR3162-201ENST00000581818 82 ntBASIC2.04□□□□□ -2.08
RAB40BQ12829 RPS15AP11-201ENST00000594193 385 ntBASIC2.04□□□□□ -2.08
RAB40BQ12829 BNIP3P30-201ENST00000601184 574 ntBASIC2.04□□□□□ -2.08
RAB40BQ12829 AC245014.2-201ENST00000603689 287 ntBASIC2.04□□□□□ -2.08
RAB40BQ12829 AC121247.2-201ENST00000604776 136 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms