Protein–RNA interactions for Protein: Q00587

CDC42EP1, Cdc42 effector protein 1, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1Q00587 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CDC42EP1Q00587 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC3.63□□□□□ -1.83
CDC42EP1Q00587 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.63□□□□□ -1.83
CDC42EP1Q00587 HMGB1P14-201ENST00000557424 591 ntBASIC3.63□□□□□ -1.83
CDC42EP1Q00587 ANP32BP3-201ENST00000559213 706 ntBASIC3.63□□□□□ -1.83
CDC42EP1Q00587 AC093249.1-201ENST00000567049 203 ntBASIC3.63□□□□□ -1.83
CDC42EP1Q00587 MIR3200-201ENST00000580767 85 ntBASIC3.63□□□□□ -1.83
CDC42EP1Q00587 MIR5690-201ENST00000583739 73 ntBASIC3.63□□□□□ -1.83
CDC42EP1Q00587 AC012493.2-201ENST00000595083 291 ntBASIC3.63□□□□□ -1.83
CDC42EP1Q00587 RNU6ATAC35P-201ENST00000609276 444 ntBASIC3.63□□□□□ -1.83
CDC42EP1Q00587 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.63□□□□□ -1.83
CDC42EP1Q00587 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.63□□□□□ -1.83
CDC42EP1Q00587 AC090971.5-201ENST00000621102 293 ntBASIC3.63□□□□□ -1.83
CDC42EP1Q00587 AF117829.1-206ENST00000621883 3802 ntBASIC3.63□□□□□ -1.83
CDC42EP1Q00587 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.63□□□□□ -1.83
CDC42EP1Q00587 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
CDC42EP1Q00587 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.63□□□□□ -1.83
CDC42EP1Q00587 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.62□□□□□ -1.83
CDC42EP1Q00587 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.62□□□□□ -1.83
CDC42EP1Q00587 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.62□□□□□ -1.83
CDC42EP1Q00587 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.62□□□□□ -1.83
CDC42EP1Q00587 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
CDC42EP1Q00587 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CDC42EP1Q00587 SNORD62.1-201ENST00000362541 86 ntBASIC3.62□□□□□ -1.83
CDC42EP1Q00587 RNU6-37P-201ENST00000362692 107 ntBASIC3.62□□□□□ -1.83
CDC42EP1Q00587 RNU6-1188P-201ENST00000363795 107 ntBASIC3.62□□□□□ -1.83
CDC42EP1Q00587 RNU6-11P-201ENST00000364234 107 ntBASIC3.62□□□□□ -1.83
CDC42EP1Q00587 RNU6-7-201ENST00000364784 107 ntBASIC3.62□□□□□ -1.83
CDC42EP1Q00587 RNU6-8-201ENST00000365467 107 ntBASIC3.62□□□□□ -1.83
CDC42EP1Q00587 RNU6-25P-201ENST00000383873 107 ntBASIC3.62□□□□□ -1.83
CDC42EP1Q00587 RNU6-1-201ENST00000383898 107 ntBASIC3.62□□□□□ -1.83
CDC42EP1Q00587 RNU6-1227P-201ENST00000383981 107 ntBASIC3.62□□□□□ -1.83
CDC42EP1Q00587 RNU6-48P-201ENST00000384161 107 ntBASIC3.62□□□□□ -1.83
CDC42EP1Q00587 RNU6-36P-201ENST00000384172 107 ntBASIC3.62□□□□□ -1.83
CDC42EP1Q00587 RNU6-4P-201ENST00000384205 107 ntBASIC3.62□□□□□ -1.83
CDC42EP1Q00587 RNU6-5P-201ENST00000384238 107 ntBASIC3.62□□□□□ -1.83
CDC42EP1Q00587 RNU6-43P-201ENST00000384302 107 ntBASIC3.62□□□□□ -1.83
CDC42EP1Q00587 RNU6-3P-201ENST00000384314 107 ntBASIC3.62□□□□□ -1.83
CDC42EP1Q00587 RNU6-16P-201ENST00000384385 107 ntBASIC3.62□□□□□ -1.83
CDC42EP1Q00587 RNU6-15P-201ENST00000384534 107 ntBASIC3.62□□□□□ -1.83
CDC42EP1Q00587 RNU6-306P-201ENST00000384617 107 ntBASIC3.62□□□□□ -1.83
CDC42EP1Q00587 RNU6-2-201ENST00000384627 107 ntBASIC3.62□□□□□ -1.83
CDC42EP1Q00587 RNU6-29P-201ENST00000384637 107 ntBASIC3.62□□□□□ -1.83
CDC42EP1Q00587 RNU6-9-201ENST00000384776 107 ntBASIC3.62□□□□□ -1.83
CDC42EP1Q00587 RNU6-33P-201ENST00000384793 107 ntBASIC3.62□□□□□ -1.83
CDC42EP1Q00587 RNU6-293P-201ENST00000411259 106 ntBASIC3.62□□□□□ -1.83
CDC42EP1Q00587 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CDC42EP1Q00587 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.62□□□□□ -1.83
CDC42EP1Q00587 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.62□□□□□ -1.83
CDC42EP1Q00587 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CDC42EP1Q00587 Y_RNA.653-201ENST00000459091 95 ntBASIC3.62□□□□□ -1.83
CDC42EP1Q00587 H3F3AP1-201ENST00000559984 334 ntBASIC3.62□□□□□ -1.83
CDC42EP1Q00587 MIR4782-201ENST00000577987 79 ntBASIC3.62□□□□□ -1.83
CDC42EP1Q00587 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.62□□□□□ -1.83
CDC42EP1Q00587 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CDC42EP1Q00587 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.62□□□□□ -1.83
CDC42EP1Q00587 AL355598.1-201ENST00000604169 202 ntBASIC3.62□□□□□ -1.83
CDC42EP1Q00587 AL160281.1-201ENST00000605307 311 ntBASIC3.62□□□□□ -1.83
CDC42EP1Q00587 AC080078.3-201ENST00000605407 463 ntBASIC3.62□□□□□ -1.83
CDC42EP1Q00587 RNU6-6P-201ENST00000606623 107 ntBASIC3.62□□□□□ -1.83
CDC42EP1Q00587 AC064836.2-201ENST00000609491 462 ntBASIC3.62□□□□□ -1.83
CDC42EP1Q00587 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
CDC42EP1Q00587 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.62□□□□□ -1.83
CDC42EP1Q00587 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
CDC42EP1Q00587 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.61□□□□□ -1.83
CDC42EP1Q00587 AC058791.1-201ENST00000608412 3198 ntBASIC3.61□□□□□ -1.83
CDC42EP1Q00587 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
CDC42EP1Q00587 RNA5SP197-201ENST00000363357 119 ntBASIC3.61□□□□□ -1.83
CDC42EP1Q00587 SNORA63-201ENST00000363450 132 ntBASIC3.61□□□□□ -1.83
CDC42EP1Q00587 Y_RNA.138-201ENST00000363462 102 ntBASIC3.61□□□□□ -1.83
CDC42EP1Q00587 RNU6-658P-201ENST00000384606 106 ntBASIC3.61□□□□□ -1.83
CDC42EP1Q00587 RPS4XP3-201ENST00000398541 413 ntBASIC3.61□□□□□ -1.83
CDC42EP1Q00587 AL357075.1-201ENST00000404107 726 ntBASIC3.61□□□□□ -1.83
CDC42EP1Q00587 ATG3P1-201ENST00000419507 911 ntBASIC3.61□□□□□ -1.83
CDC42EP1Q00587 HMGN2P30-201ENST00000423237 256 ntBASIC3.61□□□□□ -1.83
CDC42EP1Q00587 RPL23AP82-202ENST00000427528 469 ntBASIC3.61□□□□□ -1.83
CDC42EP1Q00587 AC005534.2-201ENST00000431047 433 ntBASIC3.61□□□□□ -1.83
CDC42EP1Q00587 CYCSP32-201ENST00000440548 321 ntBASIC3.61□□□□□ -1.83
CDC42EP1Q00587 AL031274.1-201ENST00000450334 232 ntBASIC3.61□□□□□ -1.83
CDC42EP1Q00587 MRPS31P2-201ENST00000451581 518 ntBASIC3.61□□□□□ -1.83
CDC42EP1Q00587 RPL30P15-201ENST00000457129 321 ntBASIC3.61□□□□□ -1.83
CDC42EP1Q00587 CENPBD1P1-201ENST00000464061 469 ntBASIC3.61□□□□□ -1.83
CDC42EP1Q00587 AC006445.2-201ENST00000510061 472 ntBASIC3.61□□□□□ -1.83
CDC42EP1Q00587 RNU1-103P-201ENST00000516502 125 ntBASIC3.61□□□□□ -1.83
CDC42EP1Q00587 RNU6-928P-201ENST00000516876 104 ntBASIC3.61□□□□□ -1.83
CDC42EP1Q00587 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.61□□□□□ -1.83
CDC42EP1Q00587 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CDC42EP1Q00587 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.61□□□□□ -1.83
CDC42EP1Q00587 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.61□□□□□ -1.83
CDC42EP1Q00587 AL163153.1-201ENST00000554223 283 ntBASIC3.61□□□□□ -1.83
CDC42EP1Q00587 TGIF1P1-201ENST00000558095 802 ntBASIC3.61□□□□□ -1.83
CDC42EP1Q00587 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.61□□□□□ -1.83
CDC42EP1Q00587 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.61□□□□□ -1.83
CDC42EP1Q00587 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.61□□□□□ -1.83
CDC42EP1Q00587 AL162713.1-201ENST00000604480 262 ntBASIC3.61□□□□□ -1.83
CDC42EP1Q00587 AC124303.1-201ENST00000605703 360 ntBASIC3.61□□□□□ -1.83
CDC42EP1Q00587 AL161423.1-201ENST00000613700 262 ntBASIC3.61□□□□□ -1.83
CDC42EP1Q00587 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.61□□□□□ -1.83
CDC42EP1Q00587 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CDC42EP1Q00587 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms