Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 AC092656.1-203ENST00000624134 423 ntBASIC1.04□□□□□ -2.24
CCL20P78556 MIR3529-201ENST00000637713 78 ntBASIC1.04□□□□□ -2.24
CCL20P78556 AC099654.8-201ENST00000637757 681 ntBASIC1.04□□□□□ -2.24
CCL20P78556 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
CCL20P78556 AC092125.1-201ENST00000562568 1995 ntBASIC1.03□□□□□ -2.24
CCL20P78556 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
CCL20P78556 CBX3P1-201ENST00000325243 554 ntBASIC1.03□□□□□ -2.24
CCL20P78556 RNU4-82P-201ENST00000362443 140 ntBASIC1.03□□□□□ -2.24
CCL20P78556 RNU6-655P-201ENST00000362858 107 ntBASIC1.03□□□□□ -2.24
CCL20P78556 RNU6-944P-201ENST00000364023 107 ntBASIC1.03□□□□□ -2.24
CCL20P78556 RNU6-743P-201ENST00000364151 106 ntBASIC1.03□□□□□ -2.24
CCL20P78556 Y_RNA.311-201ENST00000365068 96 ntBASIC1.03□□□□□ -2.24
CCL20P78556 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
CCL20P78556 RNU6-203P-201ENST00000384038 104 ntBASIC1.03□□□□□ -2.24
CCL20P78556 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
CCL20P78556 AC119751.3-201ENST00000399720 670 ntBASIC1.03□□□□□ -2.24
CCL20P78556 FCF1P10-201ENST00000407590 479 ntBASIC1.03□□□□□ -2.24
CCL20P78556 RNU6-1025P-201ENST00000410629 104 ntBASIC1.03□□□□□ -2.24
CCL20P78556 USP9YP33-201ENST00000412220 421 ntBASIC1.03□□□□□ -2.24
CCL20P78556 UBE2V1P10-201ENST00000414685 269 ntBASIC1.03□□□□□ -2.24
CCL20P78556 AC016831.2-201ENST00000417179 352 ntBASIC1.03□□□□□ -2.24
CCL20P78556 RPL30P13-201ENST00000418873 348 ntBASIC1.03□□□□□ -2.24
CCL20P78556 AL513185.2-201ENST00000425543 193 ntBASIC1.03□□□□□ -2.24
CCL20P78556 USP9YP11-201ENST00000427537 717 ntBASIC1.03□□□□□ -2.24
CCL20P78556 USP9YP35-201ENST00000435696 412 ntBASIC1.03□□□□□ -2.24
CCL20P78556 AL590365.1-201ENST00000450788 243 ntBASIC1.03□□□□□ -2.24
CCL20P78556 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.03□□□□□ -2.24
CCL20P78556 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC1.03□□□□□ -2.24
CCL20P78556 RNU6-1315P-201ENST00000517187 99 ntBASIC1.03□□□□□ -2.24
CCL20P78556 LRRC6P1-201ENST00000532188 885 ntBASIC1.03□□□□□ -2.24
CCL20P78556 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.03□□□□□ -2.24
CCL20P78556 AC025678.1-201ENST00000567861 338 ntBASIC1.03□□□□□ -2.24
CCL20P78556 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
CCL20P78556 BNIP3P26-201ENST00000600827 554 ntBASIC1.03□□□□□ -2.24
CCL20P78556 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.03□□□□□ -2.24
CCL20P78556 WISP1-OT1-201ENST00000602893 642 ntBASIC1.03□□□□□ -2.24
CCL20P78556 AL670379.6-201ENST00000603753 252 ntBASIC1.03□□□□□ -2.24
CCL20P78556 AL670379.11-201ENST00000604059 253 ntBASIC1.03□□□□□ -2.24
CCL20P78556 AC008162.1-201ENST00000604718 254 ntBASIC1.03□□□□□ -2.24
CCL20P78556 AL670379.1-201ENST00000604752 252 ntBASIC1.03□□□□□ -2.24
CCL20P78556 AL670379.5-201ENST00000605253 252 ntBASIC1.03□□□□□ -2.24
CCL20P78556 AL670379.12-201ENST00000605291 253 ntBASIC1.03□□□□□ -2.24
CCL20P78556 AL670379.8-201ENST00000605353 252 ntBASIC1.03□□□□□ -2.24
CCL20P78556 PRR13P7-201ENST00000605538 430 ntBASIC1.03□□□□□ -2.24
CCL20P78556 AL670379.7-201ENST00000605823 252 ntBASIC1.03□□□□□ -2.24
CCL20P78556 AC245297.2-201ENST00000610119 565 ntBASIC1.03□□□□□ -2.24
CCL20P78556 AC009318.2-201ENST00000610917 651 ntBASIC1.03□□□□□ -2.24
CCL20P78556 MIR8074-201ENST00000615081 81 ntBASIC1.03□□□□□ -2.24
CCL20P78556 AC021755.4-201ENST00000616620 456 ntBASIC1.03□□□□□ -2.24
CCL20P78556 IGHVIII-44-202ENST00000636235 289 ntBASIC1.03□□□□□ -2.24
CCL20P78556 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.03□□□□□ -2.24
CCL20P78556 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.03□□□□□ -2.24
CCL20P78556 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.02□□□□□ -2.25
CCL20P78556 RNU5A-8P-201ENST00000364102 114 ntBASIC1.02□□□□□ -2.25
CCL20P78556 RNU4-51P-201ENST00000364206 140 ntBASIC1.02□□□□□ -2.25
CCL20P78556 RNU6-621P-201ENST00000364752 109 ntBASIC1.02□□□□□ -2.25
CCL20P78556 Y_RNA.333-201ENST00000365274 102 ntBASIC1.02□□□□□ -2.25
CCL20P78556 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
CCL20P78556 SNORA67.6-201ENST00000391093 99 ntBASIC1.02□□□□□ -2.25
CCL20P78556 Z92545.1-201ENST00000411782 234 ntBASIC1.02□□□□□ -2.25
CCL20P78556 ZNF72P-201ENST00000425869 1908 ntBASIC1.02□□□□□ -2.25
CCL20P78556 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC1.02□□□□□ -2.25
CCL20P78556 FARSBP1-201ENST00000435808 1778 ntBASIC1.02□□□□□ -2.25
CCL20P78556 RPL7P36-201ENST00000444633 681 ntBASIC1.02□□□□□ -2.25
CCL20P78556 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.02□□□□□ -2.25
CCL20P78556 PTENP1-201ENST00000447117 1215 ntBASIC1.02□□□□□ -2.25
CCL20P78556 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.02□□□□□ -2.25
CCL20P78556 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
CCL20P78556 AC112492.4-201ENST00000456549 352 ntBASIC1.02□□□□□ -2.25
CCL20P78556 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
CCL20P78556 AC117532.1-201ENST00000514638 323 ntBASIC1.02□□□□□ -2.25
CCL20P78556 RNVU1-2-201ENST00000516326 135 ntBASIC1.02□□□□□ -2.25
CCL20P78556 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC1.02□□□□□ -2.25
CCL20P78556 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
CCL20P78556 SUB1P3-201ENST00000564581 315 ntBASIC1.02□□□□□ -2.25
CCL20P78556 AC015720.1-201ENST00000565251 277 ntBASIC1.02□□□□□ -2.25
CCL20P78556 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.02□□□□□ -2.25
CCL20P78556 MTCYBP33-201ENST00000575007 1130 ntBASIC1.02□□□□□ -2.25
CCL20P78556 SNORD53B-201ENST00000577887 78 ntBASIC1.02□□□□□ -2.25
CCL20P78556 MIR4648-201ENST00000580107 72 ntBASIC1.02□□□□□ -2.25
CCL20P78556 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC1.02□□□□□ -2.25
CCL20P78556 AC124016.2-201ENST00000610058 665 ntBASIC1.02□□□□□ -2.25
CCL20P78556 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.02□□□□□ -2.25
CCL20P78556 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
CCL20P78556 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
CCL20P78556 MIR26B-201ENST00000362251 77 ntBASIC1.01□□□□□ -2.25
CCL20P78556 RNU6-529P-201ENST00000363383 104 ntBASIC1.01□□□□□ -2.25
CCL20P78556 RNU6-843P-201ENST00000384454 104 ntBASIC1.01□□□□□ -2.25
CCL20P78556 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
CCL20P78556 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
CCL20P78556 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.01□□□□□ -2.25
CCL20P78556 AC009518.2-201ENST00000418056 731 ntBASIC1.01□□□□□ -2.25
CCL20P78556 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC1.01□□□□□ -2.25
CCL20P78556 TRBV26OR9-2-201ENST00000432077 293 ntBASIC1.01□□□□□ -2.25
CCL20P78556 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC1.01□□□□□ -2.25
CCL20P78556 AC007677.1-201ENST00000445757 515 ntBASIC1.01□□□□□ -2.25
CCL20P78556 FDX1P2-201ENST00000450769 375 ntBASIC1.01□□□□□ -2.25
CCL20P78556 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC1.01□□□□□ -2.25
CCL20P78556 AC108059.3-201ENST00000456388 214 ntBASIC1.01□□□□□ -2.25
CCL20P78556 MTND1P3-201ENST00000484956 952 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms