Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 LRRC37A5P-203ENST00000580181 585 ntBASIC2.32□□□□□ -2.04
SRPXP78539 ZNF861P-201ENST00000588126 639 ntBASIC2.32□□□□□ -2.04
SRPXP78539 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.32□□□□□ -2.04
SRPXP78539 AL020997.2-201ENST00000602607 184 ntBASIC2.32□□□□□ -2.04
SRPXP78539 AC069200.1-201ENST00000609511 323 ntBASIC2.32□□□□□ -2.04
SRPXP78539 AC068944.2-201ENST00000610373 403 ntBASIC2.32□□□□□ -2.04
SRPXP78539 RMST_4.1-201ENST00000616886 107 ntBASIC2.32□□□□□ -2.04
SRPXP78539 MIR6134-201ENST00000617606 109 ntBASIC2.32□□□□□ -2.04
SRPXP78539 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.32□□□□□ -2.04
SRPXP78539 AC034229.5-201ENST00000624258 185 ntBASIC2.32□□□□□ -2.04
SRPXP78539 MIR3199-2-201ENST00000636243 86 ntBASIC2.32□□□□□ -2.04
SRPXP78539 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.32□□□□□ -2.04
SRPXP78539 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.32□□□□□ -2.04
SRPXP78539 AC092593.1-201ENST00000515413 1815 ntBASIC2.31□□□□□ -2.04
SRPXP78539 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
SRPXP78539 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
SRPXP78539 Y_RNA.167-201ENST00000363735 109 ntBASIC2.31□□□□□ -2.04
SRPXP78539 Y_RNA.231-201ENST00000364358 102 ntBASIC2.31□□□□□ -2.04
SRPXP78539 Y_RNA.248-201ENST00000364501 109 ntBASIC2.31□□□□□ -2.04
SRPXP78539 SNORA71.1-201ENST00000364523 117 ntBASIC2.31□□□□□ -2.04
SRPXP78539 DEFA7P-201ENST00000382676 285 ntBASIC2.31□□□□□ -2.04
SRPXP78539 RNU6-877P-201ENST00000383868 107 ntBASIC2.31□□□□□ -2.04
SRPXP78539 MIR554-201ENST00000384874 96 ntBASIC2.31□□□□□ -2.04
SRPXP78539 Y_RNA.615-201ENST00000410769 117 ntBASIC2.31□□□□□ -2.04
SRPXP78539 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.31□□□□□ -2.04
SRPXP78539 AC092017.2-201ENST00000427600 362 ntBASIC2.31□□□□□ -2.04
SRPXP78539 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.31□□□□□ -2.04
SRPXP78539 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC2.31□□□□□ -2.04
SRPXP78539 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.31□□□□□ -2.04
SRPXP78539 AC009296.1-201ENST00000443146 155 ntBASIC2.31□□□□□ -2.04
SRPXP78539 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.31□□□□□ -2.04
SRPXP78539 NDUFB1P2-201ENST00000449477 176 ntBASIC2.31□□□□□ -2.04
SRPXP78539 BTF3P15-201ENST00000455606 336 ntBASIC2.31□□□□□ -2.04
SRPXP78539 RPS29P12-201ENST00000460178 152 ntBASIC2.31□□□□□ -2.04
SRPXP78539 RPS29P25-201ENST00000481709 171 ntBASIC2.31□□□□□ -2.04
SRPXP78539 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.31□□□□□ -2.04
SRPXP78539 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.31□□□□□ -2.04
SRPXP78539 MRPS36P2-201ENST00000512569 299 ntBASIC2.31□□□□□ -2.04
SRPXP78539 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.31□□□□□ -2.04
SRPXP78539 Y_RNA.687-201ENST00000516558 91 ntBASIC2.31□□□□□ -2.04
SRPXP78539 SNORA31.15-201ENST00000516771 132 ntBASIC2.31□□□□□ -2.04
SRPXP78539 SNORD60.2-201ENST00000516883 86 ntBASIC2.31□□□□□ -2.04
SRPXP78539 CENPUP1-201ENST00000526649 1202 ntBASIC2.31□□□□□ -2.04
SRPXP78539 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.31□□□□□ -2.04
SRPXP78539 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.31□□□□□ -2.04
SRPXP78539 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.31□□□□□ -2.04
SRPXP78539 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC2.31□□□□□ -2.04
SRPXP78539 NACAP3-201ENST00000552100 481 ntBASIC2.31□□□□□ -2.04
SRPXP78539 OR11H5P-201ENST00000554039 926 ntBASIC2.31□□□□□ -2.04
SRPXP78539 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.31□□□□□ -2.04
SRPXP78539 LINC00933-203ENST00000559812 219 ntBASIC2.31□□□□□ -2.04
SRPXP78539 MTCO3P23-201ENST00000561363 289 ntBASIC2.31□□□□□ -2.04
SRPXP78539 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.31□□□□□ -2.04
SRPXP78539 MIR3922-201ENST00000585192 84 ntBASIC2.31□□□□□ -2.04
SRPXP78539 AC006130.2-201ENST00000586202 326 ntBASIC2.31□□□□□ -2.04
SRPXP78539 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC2.31□□□□□ -2.04
SRPXP78539 AC008739.2-201ENST00000597006 317 ntBASIC2.31□□□□□ -2.04
SRPXP78539 VN1R80P-201ENST00000597126 338 ntBASIC2.31□□□□□ -2.04
SRPXP78539 AL355877.2-201ENST00000603670 358 ntBASIC2.31□□□□□ -2.04
SRPXP78539 AC123912.5-201ENST00000605470 343 ntBASIC2.31□□□□□ -2.04
SRPXP78539 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
SRPXP78539 RNU6-89P-201ENST00000606519 100 ntBASIC2.31□□□□□ -2.04
SRPXP78539 AC092807.2-201ENST00000609367 243 ntBASIC2.31□□□□□ -2.04
SRPXP78539 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.31□□□□□ -2.04
SRPXP78539 UCA1.1-201ENST00000620952 75 ntBASIC2.31□□□□□ -2.04
SRPXP78539 CR392039.5-201ENST00000623201 510 ntBASIC2.31□□□□□ -2.04
SRPXP78539 MIR3662-201ENST00000637030 95 ntBASIC2.31□□□□□ -2.04
SRPXP78539 AC004520.1-201ENST00000608362 1413 ntBASIC2.31□□□□□ -2.04
SRPXP78539 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
SRPXP78539 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.31□□□□□ -2.04
SRPXP78539 RNU6-266P-201ENST00000364225 107 ntBASIC2.3□□□□□ -2.04
SRPXP78539 RNU6-522P-201ENST00000364497 107 ntBASIC2.3□□□□□ -2.04
SRPXP78539 Y_RNA.399-201ENST00000383955 105 ntBASIC2.3□□□□□ -2.04
SRPXP78539 MIR490-201ENST00000384865 128 ntBASIC2.3□□□□□ -2.04
SRPXP78539 RNA5SP354-201ENST00000391247 136 ntBASIC2.3□□□□□ -2.04
SRPXP78539 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC2.3□□□□□ -2.04
SRPXP78539 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.3□□□□□ -2.04
SRPXP78539 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.3□□□□□ -2.04
SRPXP78539 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.3□□□□□ -2.04
SRPXP78539 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.3□□□□□ -2.04
SRPXP78539 AL161651.1-201ENST00000440882 223 ntBASIC2.3□□□□□ -2.04
SRPXP78539 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.3□□□□□ -2.04
SRPXP78539 FGF7P6-202ENST00000451282 293 ntBASIC2.3□□□□□ -2.04
SRPXP78539 NIPA2P5-201ENST00000452282 464 ntBASIC2.3□□□□□ -2.04
SRPXP78539 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.3□□□□□ -2.04
SRPXP78539 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.3□□□□□ -2.04
SRPXP78539 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.3□□□□□ -2.04
SRPXP78539 RNU7-167P-201ENST00000459160 62 ntBASIC2.3□□□□□ -2.04
SRPXP78539 AC091153.1-201ENST00000466297 402 ntBASIC2.3□□□□□ -2.04
SRPXP78539 HMGB1P30-201ENST00000492455 606 ntBASIC2.3□□□□□ -2.04
SRPXP78539 MTCYBP18-201ENST00000501056 747 ntBASIC2.3□□□□□ -2.04
SRPXP78539 RPL38P4-201ENST00000502376 214 ntBASIC2.3□□□□□ -2.04
SRPXP78539 AF213884.2-201ENST00000510417 903 ntBASIC2.3□□□□□ -2.04
SRPXP78539 SNORA25.17-201ENST00000517184 124 ntBASIC2.3□□□□□ -2.04
SRPXP78539 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.3□□□□□ -2.04
SRPXP78539 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.3□□□□□ -2.04
SRPXP78539 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC2.3□□□□□ -2.04
SRPXP78539 AC078814.3-201ENST00000553036 491 ntBASIC2.3□□□□□ -2.04
SRPXP78539 AC090115.3-201ENST00000553218 849 ntBASIC2.3□□□□□ -2.04
SRPXP78539 AC234778.2-201ENST00000566241 354 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 135.2 ms