Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 RNA5SP59-201ENST00000410922 110 ntBASIC1.09□□□□□ -2.23
HIST1H3AP68431 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.09□□□□□ -2.23
HIST1H3AP68431 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.09□□□□□ -2.23
HIST1H3AP68431 AC108667.1-201ENST00000428618 249 ntBASIC1.09□□□□□ -2.23
HIST1H3AP68431 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.09□□□□□ -2.23
HIST1H3AP68431 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC1.09□□□□□ -2.23
HIST1H3AP68431 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC1.09□□□□□ -2.23
HIST1H3AP68431 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.09□□□□□ -2.23
HIST1H3AP68431 AC099513.1-201ENST00000490423 301 ntBASIC1.09□□□□□ -2.23
HIST1H3AP68431 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.09□□□□□ -2.23
HIST1H3AP68431 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC1.09□□□□□ -2.23
HIST1H3AP68431 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.09□□□□□ -2.23
HIST1H3AP68431 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.09□□□□□ -2.23
HIST1H3AP68431 RNU6-572P-201ENST00000516724 80 ntBASIC1.09□□□□□ -2.23
HIST1H3AP68431 RNU1-92P-201ENST00000517017 135 ntBASIC1.09□□□□□ -2.23
HIST1H3AP68431 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.09□□□□□ -2.23
HIST1H3AP68431 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.09□□□□□ -2.23
HIST1H3AP68431 DNAJC19P9-201ENST00000555084 351 ntBASIC1.09□□□□□ -2.23
HIST1H3AP68431 AL133153.1-201ENST00000557756 303 ntBASIC1.09□□□□□ -2.23
HIST1H3AP68431 AC002400.1-201ENST00000569310 726 ntBASIC1.09□□□□□ -2.23
HIST1H3AP68431 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.09□□□□□ -2.23
HIST1H3AP68431 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.09□□□□□ -2.23
HIST1H3AP68431 uc_338.12-201ENST00000616344 181 ntBASIC1.09□□□□□ -2.23
HIST1H3AP68431 AL132822.1-201ENST00000617063 513 ntBASIC1.09□□□□□ -2.23
HIST1H3AP68431 AC078880.5-201ENST00000617845 421 ntBASIC1.09□□□□□ -2.23
HIST1H3AP68431 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.09□□□□□ -2.23
HIST1H3AP68431 AP003476.1-201ENST00000623984 516 ntBASIC1.09□□□□□ -2.23
HIST1H3AP68431 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
HIST1H3AP68431 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.09□□□□□ -2.24
HIST1H3AP68431 TEX21P-201ENST00000447107 1476 ntBASIC1.08□□□□□ -2.24
HIST1H3AP68431 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC1.08□□□□□ -2.24
HIST1H3AP68431 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
HIST1H3AP68431 CBX3P1-201ENST00000325243 554 ntBASIC1.08□□□□□ -2.24
HIST1H3AP68431 MIR186-201ENST00000384988 86 ntBASIC1.08□□□□□ -2.24
HIST1H3AP68431 SNORA48.1-201ENST00000390879 135 ntBASIC1.08□□□□□ -2.24
HIST1H3AP68431 AL359634.1-202ENST00000404721 284 ntBASIC1.08□□□□□ -2.24
HIST1H3AP68431 SRIP3-201ENST00000413200 219 ntBASIC1.08□□□□□ -2.24
HIST1H3AP68431 AL022400.1-201ENST00000423946 935 ntBASIC1.08□□□□□ -2.24
HIST1H3AP68431 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.08□□□□□ -2.24
HIST1H3AP68431 AC104058.1-201ENST00000448028 297 ntBASIC1.08□□□□□ -2.24
HIST1H3AP68431 AC017099.1-201ENST00000448261 1028 ntBASIC1.08□□□□□ -2.24
HIST1H3AP68431 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC1.08□□□□□ -2.24
HIST1H3AP68431 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.08□□□□□ -2.24
HIST1H3AP68431 RPL31P58-201ENST00000469001 379 ntBASIC1.08□□□□□ -2.24
HIST1H3AP68431 RNVU1-2-201ENST00000516326 135 ntBASIC1.08□□□□□ -2.24
HIST1H3AP68431 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC1.08□□□□□ -2.24
HIST1H3AP68431 AP003034.1-201ENST00000534621 422 ntBASIC1.08□□□□□ -2.24
HIST1H3AP68431 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.08□□□□□ -2.24
HIST1H3AP68431 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.08□□□□□ -2.24
HIST1H3AP68431 RRN3P3-201ENST00000549207 578 ntBASIC1.08□□□□□ -2.24
HIST1H3AP68431 AL731537.2-201ENST00000561565 951 ntBASIC1.08□□□□□ -2.24
HIST1H3AP68431 AC060771.1-201ENST00000582031 164 ntBASIC1.08□□□□□ -2.24
HIST1H3AP68431 AC023043.2-201ENST00000589678 1026 ntBASIC1.08□□□□□ -2.24
HIST1H3AP68431 AC012065.4-201ENST00000602445 679 ntBASIC1.08□□□□□ -2.24
HIST1H3AP68431 AC098614.4-201ENST00000607601 462 ntBASIC1.08□□□□□ -2.24
HIST1H3AP68431 AL133445.2-201ENST00000611191 527 ntBASIC1.08□□□□□ -2.24
HIST1H3AP68431 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.08□□□□□ -2.24
HIST1H3AP68431 AC009269.6-201ENST00000621778 588 ntBASIC1.08□□□□□ -2.24
HIST1H3AP68431 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.08□□□□□ -2.24
HIST1H3AP68431 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
HIST1H3AP68431 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
HIST1H3AP68431 RNU6-858P-201ENST00000362436 107 ntBASIC1.07□□□□□ -2.24
HIST1H3AP68431 SNORA7.1-201ENST00000363750 139 ntBASIC1.07□□□□□ -2.24
HIST1H3AP68431 RNU6-743P-201ENST00000364151 106 ntBASIC1.07□□□□□ -2.24
HIST1H3AP68431 FTH1P15-201ENST00000406984 280 ntBASIC1.07□□□□□ -2.24
HIST1H3AP68431 RNU2-41P-201ENST00000410991 178 ntBASIC1.07□□□□□ -2.24
HIST1H3AP68431 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.07□□□□□ -2.24
HIST1H3AP68431 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC1.07□□□□□ -2.24
HIST1H3AP68431 NCOR1P3-201ENST00000420479 303 ntBASIC1.07□□□□□ -2.24
HIST1H3AP68431 MRPS36P1-201ENST00000421291 307 ntBASIC1.07□□□□□ -2.24
HIST1H3AP68431 AL592045.1-201ENST00000429867 352 ntBASIC1.07□□□□□ -2.24
HIST1H3AP68431 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.07□□□□□ -2.24
HIST1H3AP68431 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.07□□□□□ -2.24
HIST1H3AP68431 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.07□□□□□ -2.24
HIST1H3AP68431 AC025465.3-201ENST00000510570 311 ntBASIC1.07□□□□□ -2.24
HIST1H3AP68431 RNY4P37-201ENST00000516225 96 ntBASIC1.07□□□□□ -2.24
HIST1H3AP68431 RN7SKP219-201ENST00000516825 296 ntBASIC1.07□□□□□ -2.24
HIST1H3AP68431 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.07□□□□□ -2.24
HIST1H3AP68431 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.07□□□□□ -2.24
HIST1H3AP68431 AC022616.8-201ENST00000533569 253 ntBASIC1.07□□□□□ -2.24
HIST1H3AP68431 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.07□□□□□ -2.24
HIST1H3AP68431 AC019288.1-201ENST00000557918 224 ntBASIC1.07□□□□□ -2.24
HIST1H3AP68431 AP001542.1-201ENST00000591314 200 ntBASIC1.07□□□□□ -2.24
HIST1H3AP68431 VN1R87P-201ENST00000596706 487 ntBASIC1.07□□□□□ -2.24
HIST1H3AP68431 AC073413.2-201ENST00000604332 360 ntBASIC1.07□□□□□ -2.24
HIST1H3AP68431 AC069545.1-201ENST00000605671 358 ntBASIC1.07□□□□□ -2.24
HIST1H3AP68431 AC090970.3-201ENST00000612566 866 ntBASIC1.07□□□□□ -2.24
HIST1H3AP68431 HAUS6P2-201ENST00000433254 2404 ntBASIC1.07□□□□□ -2.24
HIST1H3AP68431 AP000560.1-201ENST00000624150 1937 ntBASIC1.07□□□□□ -2.24
HIST1H3AP68431 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.06□□□□□ -2.24
HIST1H3AP68431 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.06□□□□□ -2.24
HIST1H3AP68431 RNU6-271P-201ENST00000363858 105 ntBASIC1.06□□□□□ -2.24
HIST1H3AP68431 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.06□□□□□ -2.24
HIST1H3AP68431 AP1B1P2-201ENST00000416196 106 ntBASIC1.06□□□□□ -2.24
HIST1H3AP68431 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC1.06□□□□□ -2.24
HIST1H3AP68431 MTND5P25-201ENST00000430499 799 ntBASIC1.06□□□□□ -2.24
HIST1H3AP68431 RSL24D1P8-201ENST00000434442 492 ntBASIC1.06□□□□□ -2.24
HIST1H3AP68431 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1.06□□□□□ -2.24
HIST1H3AP68431 DUXAP8-207ENST00000456786 622 ntBASIC1.06□□□□□ -2.24
HIST1H3AP68431 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms