Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.53□□□□□ -2
LMO4P61968 AC008521.1-201ENST00000587471 187 ntBASIC2.53□□□□□ -2
LMO4P61968 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.53□□□□□ -2
LMO4P61968 AC006504.6-201ENST00000590142 199 ntBASIC2.53□□□□□ -2
LMO4P61968 AL080274.1-201ENST00000605565 220 ntBASIC2.53□□□□□ -2
LMO4P61968 AL355802.3-201ENST00000607571 545 ntBASIC2.53□□□□□ -2
LMO4P61968 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.53□□□□□ -2
LMO4P61968 RMST_8.1-201ENST00000610287 165 ntBASIC2.53□□□□□ -2
LMO4P61968 AL591516.1-201ENST00000611326 274 ntBASIC2.53□□□□□ -2
LMO4P61968 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.53□□□□□ -2
LMO4P61968 AL138880.2-201ENST00000616214 239 ntBASIC2.53□□□□□ -2
LMO4P61968 SNHG22-203ENST00000617833 660 ntBASIC2.53□□□□□ -2
LMO4P61968 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
LMO4P61968 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
LMO4P61968 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
LMO4P61968 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
LMO4P61968 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC2.53□□□□□ -2
LMO4P61968 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
LMO4P61968 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2.01
LMO4P61968 AL365361.1-201ENST00000566942 3481 ntBASIC2.52□□□□□ -2.01
LMO4P61968 SNORD113-7-201ENST00000363762 77 ntBASIC2.52□□□□□ -2.01
LMO4P61968 RNU6-82P-201ENST00000363970 107 ntBASIC2.52□□□□□ -2.01
LMO4P61968 SNORA33.2-201ENST00000365413 134 ntBASIC2.52□□□□□ -2.01
LMO4P61968 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.52□□□□□ -2.01
LMO4P61968 Y_RNA.445-201ENST00000384168 102 ntBASIC2.52□□□□□ -2.01
LMO4P61968 RNU6-1160P-201ENST00000384546 104 ntBASIC2.52□□□□□ -2.01
LMO4P61968 RNU6-1127P-201ENST00000384580 107 ntBASIC2.52□□□□□ -2.01
LMO4P61968 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.52□□□□□ -2.01
LMO4P61968 RNA5SP31-201ENST00000411144 127 ntBASIC2.52□□□□□ -2.01
LMO4P61968 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.52□□□□□ -2.01
LMO4P61968 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
LMO4P61968 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.52□□□□□ -2.01
LMO4P61968 AC022018.1-201ENST00000430685 241 ntBASIC2.52□□□□□ -2.01
LMO4P61968 BX679664.1-201ENST00000434429 253 ntBASIC2.52□□□□□ -2.01
LMO4P61968 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.52□□□□□ -2.01
LMO4P61968 AC025750.2-201ENST00000442609 450 ntBASIC2.52□□□□□ -2.01
LMO4P61968 MTCO3P45-201ENST00000443036 613 ntBASIC2.52□□□□□ -2.01
LMO4P61968 RPS15AP27-201ENST00000449183 343 ntBASIC2.52□□□□□ -2.01
LMO4P61968 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.52□□□□□ -2.01
LMO4P61968 RPL21P8-201ENST00000465083 535 ntBASIC2.52□□□□□ -2.01
LMO4P61968 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.52□□□□□ -2.01
LMO4P61968 AC010631.1-201ENST00000474150 156 ntBASIC2.52□□□□□ -2.01
LMO4P61968 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.52□□□□□ -2.01
LMO4P61968 RPS4XP22-201ENST00000480755 780 ntBASIC2.52□□□□□ -2.01
LMO4P61968 RN7SL432P-201ENST00000484057 298 ntBASIC2.52□□□□□ -2.01
LMO4P61968 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.52□□□□□ -2.01
LMO4P61968 AC090096.1-201ENST00000489168 390 ntBASIC2.52□□□□□ -2.01
LMO4P61968 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.52□□□□□ -2.01
LMO4P61968 RNU6-566P-201ENST00000516790 107 ntBASIC2.52□□□□□ -2.01
LMO4P61968 RN7SKP272-201ENST00000516988 232 ntBASIC2.52□□□□□ -2.01
LMO4P61968 COPS8P3-201ENST00000526024 482 ntBASIC2.52□□□□□ -2.01
LMO4P61968 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.52□□□□□ -2.01
LMO4P61968 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.52□□□□□ -2.01
LMO4P61968 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.52□□□□□ -2.01
LMO4P61968 AC007151.1-201ENST00000572774 483 ntBASIC2.52□□□□□ -2.01
LMO4P61968 MIR4790-201ENST00000577799 79 ntBASIC2.52□□□□□ -2.01
LMO4P61968 MIR3609-201ENST00000582661 80 ntBASIC2.52□□□□□ -2.01
LMO4P61968 MIR3672-201ENST00000584290 82 ntBASIC2.52□□□□□ -2.01
LMO4P61968 AF038458.1-201ENST00000588406 262 ntBASIC2.52□□□□□ -2.01
LMO4P61968 MIR7106-201ENST00000612419 65 ntBASIC2.52□□□□□ -2.01
LMO4P61968 AC004696.1-201ENST00000614345 607 ntBASIC2.52□□□□□ -2.01
LMO4P61968 AC090132.2-201ENST00000615881 347 ntBASIC2.52□□□□□ -2.01
LMO4P61968 AL589994.2-201ENST00000621124 579 ntBASIC2.52□□□□□ -2.01
LMO4P61968 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.52□□□□□ -2.01
LMO4P61968 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.52□□□□□ -2.01
LMO4P61968 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC2.52□□□□□ -2.01
LMO4P61968 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.52□□□□□ -2.01
LMO4P61968 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC2.52□□□□□ -2.01
LMO4P61968 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
LMO4P61968 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
LMO4P61968 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
LMO4P61968 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
LMO4P61968 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.51□□□□□ -2.01
LMO4P61968 Y_RNA.202-201ENST00000364083 110 ntBASIC2.51□□□□□ -2.01
LMO4P61968 RNU6-946P-201ENST00000383878 107 ntBASIC2.51□□□□□ -2.01
LMO4P61968 Y_RNA.395-201ENST00000383945 109 ntBASIC2.51□□□□□ -2.01
LMO4P61968 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
LMO4P61968 EIF4E2P1-201ENST00000393781 255 ntBASIC2.51□□□□□ -2.01
LMO4P61968 MTCYBP4-201ENST00000401524 249 ntBASIC2.51□□□□□ -2.01
LMO4P61968 RNU6-387P-201ENST00000411331 105 ntBASIC2.51□□□□□ -2.01
LMO4P61968 RPL37P10-201ENST00000412884 288 ntBASIC2.51□□□□□ -2.01
LMO4P61968 AC074085.1-201ENST00000413598 418 ntBASIC2.51□□□□□ -2.01
LMO4P61968 EEF1A1P41-201ENST00000414667 207 ntBASIC2.51□□□□□ -2.01
LMO4P61968 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.51□□□□□ -2.01
LMO4P61968 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.51□□□□□ -2.01
LMO4P61968 RPL21P40-201ENST00000428586 483 ntBASIC2.51□□□□□ -2.01
LMO4P61968 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.51□□□□□ -2.01
LMO4P61968 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.51□□□□□ -2.01
LMO4P61968 SCARNA18-201ENST00000459004 134 ntBASIC2.51□□□□□ -2.01
LMO4P61968 AC117440.1-201ENST00000474107 571 ntBASIC2.51□□□□□ -2.01
LMO4P61968 AL163540.1-201ENST00000485382 386 ntBASIC2.51□□□□□ -2.01
LMO4P61968 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.51□□□□□ -2.01
LMO4P61968 MTND4LP22-201ENST00000508209 276 ntBASIC2.51□□□□□ -2.01
LMO4P61968 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC2.51□□□□□ -2.01
LMO4P61968 RN7SKP24-201ENST00000515888 284 ntBASIC2.51□□□□□ -2.01
LMO4P61968 RNU6-189P-201ENST00000516120 101 ntBASIC2.51□□□□□ -2.01
LMO4P61968 RNU6-256P-201ENST00000516747 97 ntBASIC2.51□□□□□ -2.01
LMO4P61968 RNA5SP291-201ENST00000517222 105 ntBASIC2.51□□□□□ -2.01
LMO4P61968 RNA5SP454-201ENST00000517231 127 ntBASIC2.51□□□□□ -2.01
LMO4P61968 RANP3-201ENST00000530970 276 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 138.8 ms