Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.26□□□□□ -2.21
AP1S1P61966 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC1.26□□□□□ -2.21
AP1S1P61966 AC104651.1-201ENST00000427559 735 ntBASIC1.26□□□□□ -2.21
AP1S1P61966 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.26□□□□□ -2.21
AP1S1P61966 RPL7P34-201ENST00000433316 712 ntBASIC1.26□□□□□ -2.21
AP1S1P61966 AC005094.1-201ENST00000440420 368 ntBASIC1.26□□□□□ -2.21
AP1S1P61966 AC092473.1-201ENST00000441098 221 ntBASIC1.26□□□□□ -2.21
AP1S1P61966 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC1.26□□□□□ -2.21
AP1S1P61966 RPL31P58-201ENST00000469001 379 ntBASIC1.26□□□□□ -2.21
AP1S1P61966 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC1.26□□□□□ -2.21
AP1S1P61966 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.26□□□□□ -2.21
AP1S1P61966 AC108729.3-201ENST00000513484 108 ntBASIC1.26□□□□□ -2.21
AP1S1P61966 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC1.26□□□□□ -2.21
AP1S1P61966 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC1.26□□□□□ -2.21
AP1S1P61966 OR5B19P-201ENST00000531766 928 ntBASIC1.26□□□□□ -2.21
AP1S1P61966 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.26□□□□□ -2.21
AP1S1P61966 AC073413.2-201ENST00000604332 360 ntBASIC1.26□□□□□ -2.21
AP1S1P61966 AL133445.2-201ENST00000611191 527 ntBASIC1.26□□□□□ -2.21
AP1S1P61966 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.26□□□□□ -2.21
AP1S1P61966 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
AP1S1P61966 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.26□□□□□ -2.21
AP1S1P61966 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
AP1S1P61966 Y_RNA.110-201ENST00000363220 99 ntBASIC1.25□□□□□ -2.21
AP1S1P61966 RNA5SP240-201ENST00000365355 128 ntBASIC1.25□□□□□ -2.21
AP1S1P61966 RNU1-57P-201ENST00000384491 166 ntBASIC1.25□□□□□ -2.21
AP1S1P61966 MIR518D-201ENST00000385014 87 ntBASIC1.25□□□□□ -2.21
AP1S1P61966 MIR1284-201ENST00000408337 120 ntBASIC1.25□□□□□ -2.21
AP1S1P61966 MIR1283-2-201ENST00000408621 87 ntBASIC1.25□□□□□ -2.21
AP1S1P61966 RPL23AP36-201ENST00000413895 458 ntBASIC1.25□□□□□ -2.21
AP1S1P61966 AL353621.1-201ENST00000418219 243 ntBASIC1.25□□□□□ -2.21
AP1S1P61966 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.25□□□□□ -2.21
AP1S1P61966 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.25□□□□□ -2.21
AP1S1P61966 RSU1P2-202ENST00000437884 485 ntBASIC1.25□□□□□ -2.21
AP1S1P61966 AL121601.2-201ENST00000438019 707 ntBASIC1.25□□□□□ -2.21
AP1S1P61966 FTH1P25-201ENST00000447665 469 ntBASIC1.25□□□□□ -2.21
AP1S1P61966 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.25□□□□□ -2.21
AP1S1P61966 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.25□□□□□ -2.21
AP1S1P61966 RPS29P29-201ENST00000456396 171 ntBASIC1.25□□□□□ -2.21
AP1S1P61966 Y_RNA.638-201ENST00000459374 113 ntBASIC1.25□□□□□ -2.21
AP1S1P61966 AC104629.1-201ENST00000494226 508 ntBASIC1.25□□□□□ -2.21
AP1S1P61966 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.25□□□□□ -2.21
AP1S1P61966 AP006587.4-201ENST00000526053 529 ntBASIC1.25□□□□□ -2.21
AP1S1P61966 CYCSP27-201ENST00000527643 293 ntBASIC1.25□□□□□ -2.21
AP1S1P61966 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.25□□□□□ -2.21
AP1S1P61966 RRN3P3-201ENST00000549207 578 ntBASIC1.25□□□□□ -2.21
AP1S1P61966 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.25□□□□□ -2.21
AP1S1P61966 AC018638.7-201ENST00000605836 1114 ntBASIC1.25□□□□□ -2.21
AP1S1P61966 AP003476.1-201ENST00000623984 516 ntBASIC1.25□□□□□ -2.21
AP1S1P61966 AC126544.2-201ENST00000625174 749 ntBASIC1.25□□□□□ -2.21
AP1S1P61966 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.25□□□□□ -2.21
AP1S1P61966 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
AP1S1P61966 SNORD115-3-201ENST00000363100 82 ntBASIC1.24□□□□□ -2.21
AP1S1P61966 MIR561-201ENST00000385216 97 ntBASIC1.24□□□□□ -2.21
AP1S1P61966 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
AP1S1P61966 RNU2-48P-201ENST00000410694 191 ntBASIC1.24□□□□□ -2.21
AP1S1P61966 RPS6P15-201ENST00000431996 751 ntBASIC1.24□□□□□ -2.21
AP1S1P61966 AL117351.1-201ENST00000438864 766 ntBASIC1.24□□□□□ -2.21
AP1S1P61966 MTCO1P53-201ENST00000441633 699 ntBASIC1.24□□□□□ -2.21
AP1S1P61966 MTCO1P27-201ENST00000448269 226 ntBASIC1.24□□□□□ -2.21
AP1S1P61966 SNRPFP4-201ENST00000456366 242 ntBASIC1.24□□□□□ -2.21
AP1S1P61966 CYP2C59P-201ENST00000457790 269 ntBASIC1.24□□□□□ -2.21
AP1S1P61966 SUMO2P5-201ENST00000506790 245 ntBASIC1.24□□□□□ -2.21
AP1S1P61966 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC1.24□□□□□ -2.21
AP1S1P61966 AC113347.3-201ENST00000509113 148 ntBASIC1.24□□□□□ -2.21
AP1S1P61966 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
AP1S1P61966 AC112198.4-201ENST00000515450 351 ntBASIC1.24□□□□□ -2.21
AP1S1P61966 SNORA48.11-201ENST00000517015 89 ntBASIC1.24□□□□□ -2.21
AP1S1P61966 NDUFA5P6-201ENST00000542110 379 ntBASIC1.24□□□□□ -2.21
AP1S1P61966 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC1.24□□□□□ -2.21
AP1S1P61966 CLIC4P2-201ENST00000601934 717 ntBASIC1.24□□□□□ -2.21
AP1S1P61966 AP001485.1-201ENST00000604799 199 ntBASIC1.24□□□□□ -2.21
AP1S1P61966 ELOCP5-201ENST00000604924 333 ntBASIC1.24□□□□□ -2.21
AP1S1P61966 AC016727.1-205ENST00000605437 569 ntBASIC1.24□□□□□ -2.21
AP1S1P61966 AL359821.1-201ENST00000605519 182 ntBASIC1.24□□□□□ -2.21
AP1S1P61966 AC107952.2-201ENST00000606048 486 ntBASIC1.24□□□□□ -2.21
AP1S1P61966 AL158211.2-201ENST00000607282 395 ntBASIC1.24□□□□□ -2.21
AP1S1P61966 AC092953.2-201ENST00000608000 699 ntBASIC1.24□□□□□ -2.21
AP1S1P61966 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.24□□□□□ -2.21
AP1S1P61966 AC123767.1-202ENST00000620407 817 ntBASIC1.24□□□□□ -2.21
AP1S1P61966 PCMTD1P7-201ENST00000634506 357 ntBASIC1.24□□□□□ -2.21
AP1S1P61966 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
AP1S1P61966 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.23□□□□□ -2.21
AP1S1P61966 Y_RNA.338-201ENST00000365320 114 ntBASIC1.23□□□□□ -2.21
AP1S1P61966 RNU6-338P-201ENST00000383888 105 ntBASIC1.23□□□□□ -2.21
AP1S1P61966 RNU6-701P-201ENST00000384059 107 ntBASIC1.23□□□□□ -2.21
AP1S1P61966 Y_RNA.472-201ENST00000384322 102 ntBASIC1.23□□□□□ -2.21
AP1S1P61966 RNU6-939P-201ENST00000384634 107 ntBASIC1.23□□□□□ -2.21
AP1S1P61966 MIR30A-201ENST00000385092 71 ntBASIC1.23□□□□□ -2.21
AP1S1P61966 AL449283.1-202ENST00000418249 604 ntBASIC1.23□□□□□ -2.21
AP1S1P61966 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1.23□□□□□ -2.21
AP1S1P61966 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.23□□□□□ -2.21
AP1S1P61966 AC008267.5-201ENST00000424928 265 ntBASIC1.23□□□□□ -2.21
AP1S1P61966 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1.23□□□□□ -2.21
AP1S1P61966 AP000949.1-201ENST00000438328 629 ntBASIC1.23□□□□□ -2.21
AP1S1P61966 BRK1P2-201ENST00000442875 223 ntBASIC1.23□□□□□ -2.21
AP1S1P61966 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
AP1S1P61966 RNA5SP57-201ENST00000459463 123 ntBASIC1.23□□□□□ -2.21
AP1S1P61966 AC023194.1-201ENST00000493084 308 ntBASIC1.23□□□□□ -2.21
AP1S1P61966 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.23□□□□□ -2.21
AP1S1P61966 RNU6-572P-201ENST00000516724 80 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms