Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.48□□□□□ -2.01
PEX3P56589 MTND4LP5-201ENST00000605152 292 ntBASIC2.48□□□□□ -2.01
PEX3P56589 AC005609.4-201ENST00000625071 447 ntBASIC2.48□□□□□ -2.01
PEX3P56589 AC110079.1-202ENST00000635213 138 ntBASIC2.48□□□□□ -2.01
PEX3P56589 AL512643.1-201ENST00000635735 524 ntBASIC2.48□□□□□ -2.01
PEX3P56589 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.48□□□□□ -2.01
PEX3P56589 AC093536.2-201ENST00000565257 1406 ntBASIC2.48□□□□□ -2.01
PEX3P56589 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
PEX3P56589 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
PEX3P56589 Z82209.1-201ENST00000422141 2135 ntBASIC2.47□□□□□ -2.01
PEX3P56589 HSPA8P4-201ENST00000511877 1920 ntBASIC2.47□□□□□ -2.01
PEX3P56589 NACAP2-201ENST00000318548 624 ntBASIC2.47□□□□□ -2.01
PEX3P56589 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC2.47□□□□□ -2.01
PEX3P56589 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.47□□□□□ -2.01
PEX3P56589 MTCO3P41-201ENST00000414801 328 ntBASIC2.47□□□□□ -2.01
PEX3P56589 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.47□□□□□ -2.01
PEX3P56589 HMGN2P30-201ENST00000423237 256 ntBASIC2.47□□□□□ -2.01
PEX3P56589 AL160275.3-201ENST00000423876 471 ntBASIC2.47□□□□□ -2.01
PEX3P56589 AC073464.1-201ENST00000429823 534 ntBASIC2.47□□□□□ -2.01
PEX3P56589 HMGB1P9-201ENST00000429856 646 ntBASIC2.47□□□□□ -2.01
PEX3P56589 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.47□□□□□ -2.01
PEX3P56589 AC098831.1-201ENST00000440661 216 ntBASIC2.47□□□□□ -2.01
PEX3P56589 AL356010.1-201ENST00000456364 102 ntBASIC2.47□□□□□ -2.01
PEX3P56589 RPL26P9-201ENST00000457466 433 ntBASIC2.47□□□□□ -2.01
PEX3P56589 AC022364.2-201ENST00000457963 554 ntBASIC2.47□□□□□ -2.01
PEX3P56589 AC022493.1-201ENST00000492984 337 ntBASIC2.47□□□□□ -2.01
PEX3P56589 AC023194.1-201ENST00000493084 308 ntBASIC2.47□□□□□ -2.01
PEX3P56589 LAMTOR3P2-201ENST00000504479 232 ntBASIC2.47□□□□□ -2.01
PEX3P56589 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.47□□□□□ -2.01
PEX3P56589 AC008716.1-201ENST00000511084 513 ntBASIC2.47□□□□□ -2.01
PEX3P56589 RAC1P5-201ENST00000512182 576 ntBASIC2.47□□□□□ -2.01
PEX3P56589 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.47□□□□□ -2.01
PEX3P56589 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.47□□□□□ -2.01
PEX3P56589 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.47□□□□□ -2.01
PEX3P56589 AP003392.2-201ENST00000527269 208 ntBASIC2.47□□□□□ -2.01
PEX3P56589 AP005435.4-201ENST00000529514 284 ntBASIC2.47□□□□□ -2.01
PEX3P56589 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.47□□□□□ -2.01
PEX3P56589 EIF1P4-201ENST00000572664 335 ntBASIC2.47□□□□□ -2.01
PEX3P56589 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.47□□□□□ -2.01
PEX3P56589 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC2.47□□□□□ -2.01
PEX3P56589 MIR5194-201ENST00000582634 120 ntBASIC2.47□□□□□ -2.01
PEX3P56589 AC017083.3-201ENST00000609955 700 ntBASIC2.47□□□□□ -2.01
PEX3P56589 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.47□□□□□ -2.01
PEX3P56589 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
PEX3P56589 AC110491.1-201ENST00000562191 2010 ntBASIC2.47□□□□□ -2.01
PEX3P56589 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.47□□□□□ -2.01
PEX3P56589 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.01
PEX3P56589 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.01
PEX3P56589 ZNF680P1-201ENST00000436625 1469 ntBASIC2.46□□□□□ -2.02
PEX3P56589 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.46□□□□□ -2.02
PEX3P56589 RNU6-1120P-201ENST00000362988 108 ntBASIC2.46□□□□□ -2.02
PEX3P56589 SNORA62.1-201ENST00000364287 154 ntBASIC2.46□□□□□ -2.02
PEX3P56589 RNA5SP139-201ENST00000364340 117 ntBASIC2.46□□□□□ -2.02
PEX3P56589 MIR301A-201ENST00000385261 86 ntBASIC2.46□□□□□ -2.02
PEX3P56589 SNORA40C-201ENST00000391285 128 ntBASIC2.46□□□□□ -2.02
PEX3P56589 CISD1P1-201ENST00000393907 327 ntBASIC2.46□□□□□ -2.02
PEX3P56589 AC068050.1-201ENST00000394891 380 ntBASIC2.46□□□□□ -2.02
PEX3P56589 AL356057.2-201ENST00000403318 432 ntBASIC2.46□□□□□ -2.02
PEX3P56589 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
PEX3P56589 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC2.46□□□□□ -2.02
PEX3P56589 UBE2V1P10-201ENST00000414685 269 ntBASIC2.46□□□□□ -2.02
PEX3P56589 OR51A5P-201ENST00000415429 942 ntBASIC2.46□□□□□ -2.02
PEX3P56589 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
PEX3P56589 AC098614.2-201ENST00000426040 255 ntBASIC2.46□□□□□ -2.02
PEX3P56589 MTND1P18-201ENST00000448191 573 ntBASIC2.46□□□□□ -2.02
PEX3P56589 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.46□□□□□ -2.02
PEX3P56589 AL162395.1-201ENST00000457882 422 ntBASIC2.46□□□□□ -2.02
PEX3P56589 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.46□□□□□ -2.02
PEX3P56589 RPL37P6-201ENST00000460682 294 ntBASIC2.46□□□□□ -2.02
PEX3P56589 RNU1-104P-201ENST00000517280 175 ntBASIC2.46□□□□□ -2.02
PEX3P56589 SUB1P1-201ENST00000524415 382 ntBASIC2.46□□□□□ -2.02
PEX3P56589 AC022880.1-201ENST00000534017 973 ntBASIC2.46□□□□□ -2.02
PEX3P56589 ADI1P3-201ENST00000549509 470 ntBASIC2.46□□□□□ -2.02
PEX3P56589 AC078814.3-201ENST00000553036 491 ntBASIC2.46□□□□□ -2.02
PEX3P56589 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.46□□□□□ -2.02
PEX3P56589 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
PEX3P56589 MIR1273C-201ENST00000578669 77 ntBASIC2.46□□□□□ -2.02
PEX3P56589 AL355598.1-201ENST00000604169 202 ntBASIC2.46□□□□□ -2.02
PEX3P56589 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.46□□□□□ -2.02
PEX3P56589 AL161629.2-201ENST00000615347 275 ntBASIC2.46□□□□□ -2.02
PEX3P56589 AC015540.1-201ENST00000615828 501 ntBASIC2.46□□□□□ -2.02
PEX3P56589 AL359740.1-201ENST00000624340 592 ntBASIC2.46□□□□□ -2.02
PEX3P56589 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.46□□□□□ -2.02
PEX3P56589 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
PEX3P56589 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
PEX3P56589 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
PEX3P56589 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
PEX3P56589 AC135776.4-201ENST00000624300 1904 ntBASIC2.45□□□□□ -2.02
PEX3P56589 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.45□□□□□ -2.02
PEX3P56589 Y_RNA.1-201ENST00000352915 104 ntBASIC2.45□□□□□ -2.02
PEX3P56589 Y_RNA.296-201ENST00000364930 108 ntBASIC2.45□□□□□ -2.02
PEX3P56589 RNU6-301P-201ENST00000384277 107 ntBASIC2.45□□□□□ -2.02
PEX3P56589 U3.37-201ENST00000408528 213 ntBASIC2.45□□□□□ -2.02
PEX3P56589 RNU4-55P-201ENST00000410731 137 ntBASIC2.45□□□□□ -2.02
PEX3P56589 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.45□□□□□ -2.02
PEX3P56589 AC009414.1-201ENST00000427200 443 ntBASIC2.45□□□□□ -2.02
PEX3P56589 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.45□□□□□ -2.02
PEX3P56589 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.45□□□□□ -2.02
PEX3P56589 CALM2P2-201ENST00000428512 440 ntBASIC2.45□□□□□ -2.02
PEX3P56589 AL360271.2-201ENST00000447710 161 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 151.8 ms