Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 BTF3P7-201ENST00000407097 488 ntBASIC2.13□□□□□ -2.07
LIM2P55344 Y_RNA.623-201ENST00000411128 95 ntBASIC2.13□□□□□ -2.07
LIM2P55344 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.13□□□□□ -2.07
LIM2P55344 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.13□□□□□ -2.07
LIM2P55344 AL031779.1-201ENST00000415663 330 ntBASIC2.13□□□□□ -2.07
LIM2P55344 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC2.13□□□□□ -2.07
LIM2P55344 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.13□□□□□ -2.07
LIM2P55344 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.13□□□□□ -2.07
LIM2P55344 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.13□□□□□ -2.07
LIM2P55344 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC2.13□□□□□ -2.07
LIM2P55344 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.13□□□□□ -2.07
LIM2P55344 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.13□□□□□ -2.07
LIM2P55344 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC2.13□□□□□ -2.07
LIM2P55344 GMFBP1-201ENST00000467831 427 ntBASIC2.13□□□□□ -2.07
LIM2P55344 RPL23AP49-201ENST00000492925 468 ntBASIC2.13□□□□□ -2.07
LIM2P55344 AC022493.1-201ENST00000492984 337 ntBASIC2.13□□□□□ -2.07
LIM2P55344 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.13□□□□□ -2.07
LIM2P55344 RNA5SP112-201ENST00000515937 99 ntBASIC2.13□□□□□ -2.07
LIM2P55344 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.13□□□□□ -2.07
LIM2P55344 AC005261.5-201ENST00000596280 355 ntBASIC2.13□□□□□ -2.07
LIM2P55344 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.13□□□□□ -2.07
LIM2P55344 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.13□□□□□ -2.07
LIM2P55344 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.13□□□□□ -2.07
LIM2P55344 AC093648.1-201ENST00000623546 606 ntBASIC2.13□□□□□ -2.07
LIM2P55344 AC244517.12-201ENST00000623581 663 ntBASIC2.13□□□□□ -2.07
LIM2P55344 AC138627.2-201ENST00000624202 601 ntBASIC2.13□□□□□ -2.07
LIM2P55344 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
LIM2P55344 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
LIM2P55344 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
LIM2P55344 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
LIM2P55344 HAUS6P2-201ENST00000433254 2404 ntBASIC2.12□□□□□ -2.07
LIM2P55344 MTND4P27-201ENST00000450813 1354 ntBASIC2.12□□□□□ -2.07
LIM2P55344 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
LIM2P55344 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.12□□□□□ -2.07
LIM2P55344 RNU6-486P-201ENST00000363116 107 ntBASIC2.12□□□□□ -2.07
LIM2P55344 VTRNA1-1-201ENST00000363120 99 ntBASIC2.12□□□□□ -2.07
LIM2P55344 SNORD115-7-201ENST00000365306 82 ntBASIC2.12□□□□□ -2.07
LIM2P55344 SNORA75B-201ENST00000384053 137 ntBASIC2.12□□□□□ -2.07
LIM2P55344 MIR221-201ENST00000385135 110 ntBASIC2.12□□□□□ -2.07
LIM2P55344 CISD1P1-201ENST00000393907 327 ntBASIC2.12□□□□□ -2.07
LIM2P55344 U6atac.2-201ENST00000408644 118 ntBASIC2.12□□□□□ -2.07
LIM2P55344 RNU6-195P-201ENST00000411352 109 ntBASIC2.12□□□□□ -2.07
LIM2P55344 HMGN2P35-201ENST00000412164 270 ntBASIC2.12□□□□□ -2.07
LIM2P55344 AL365338.1-201ENST00000422282 858 ntBASIC2.12□□□□□ -2.07
LIM2P55344 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.12□□□□□ -2.07
LIM2P55344 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.12□□□□□ -2.07
LIM2P55344 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC2.12□□□□□ -2.07
LIM2P55344 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.12□□□□□ -2.07
LIM2P55344 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.12□□□□□ -2.07
LIM2P55344 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.12□□□□□ -2.07
LIM2P55344 Z83846.1-201ENST00000446798 265 ntBASIC2.12□□□□□ -2.07
LIM2P55344 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
LIM2P55344 AC092001.1-201ENST00000453012 261 ntBASIC2.12□□□□□ -2.07
LIM2P55344 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.12□□□□□ -2.07
LIM2P55344 MTCYBP1-201ENST00000454315 1119 ntBASIC2.12□□□□□ -2.07
LIM2P55344 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.12□□□□□ -2.07
LIM2P55344 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.12□□□□□ -2.07
LIM2P55344 AC006026.2-201ENST00000457376 180 ntBASIC2.12□□□□□ -2.07
LIM2P55344 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC2.12□□□□□ -2.07
LIM2P55344 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.12□□□□□ -2.07
LIM2P55344 HMGB1P30-201ENST00000492455 606 ntBASIC2.12□□□□□ -2.07
LIM2P55344 RPL22P13-201ENST00000493291 347 ntBASIC2.12□□□□□ -2.07
LIM2P55344 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.12□□□□□ -2.07
LIM2P55344 SNORA31.6-201ENST00000516241 130 ntBASIC2.12□□□□□ -2.07
LIM2P55344 RNU5B-3P-201ENST00000516601 115 ntBASIC2.12□□□□□ -2.07
LIM2P55344 ACA59.2-201ENST00000517061 156 ntBASIC2.12□□□□□ -2.07
LIM2P55344 SCARNA3-201ENST00000517097 143 ntBASIC2.12□□□□□ -2.07
LIM2P55344 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.12□□□□□ -2.07
LIM2P55344 PRELID2P1-201ENST00000552837 301 ntBASIC2.12□□□□□ -2.07
LIM2P55344 MIR5692A1-201ENST00000580523 69 ntBASIC2.12□□□□□ -2.07
LIM2P55344 AC040904.1-201ENST00000590850 223 ntBASIC2.12□□□□□ -2.07
LIM2P55344 AL158032.1-201ENST00000605401 106 ntBASIC2.12□□□□□ -2.07
LIM2P55344 AC126118.1-201ENST00000607744 628 ntBASIC2.12□□□□□ -2.07
LIM2P55344 AC245008.1-201ENST00000608123 476 ntBASIC2.12□□□□□ -2.07
LIM2P55344 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
LIM2P55344 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.12□□□□□ -2.07
LIM2P55344 AC022079.1-201ENST00000621546 602 ntBASIC2.12□□□□□ -2.07
LIM2P55344 AC009161.2-201ENST00000624626 138 ntBASIC2.12□□□□□ -2.07
LIM2P55344 AC080128.1-201ENST00000474389 1917 ntBASIC2.12□□□□□ -2.07
LIM2P55344 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
LIM2P55344 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
LIM2P55344 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.12□□□□□ -2.07
LIM2P55344 MTND5P6-201ENST00000422338 1798 ntBASIC2.11□□□□□ -2.07
LIM2P55344 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
LIM2P55344 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
LIM2P55344 RNU4-48P-201ENST00000365559 182 ntBASIC2.11□□□□□ -2.07
LIM2P55344 SNORA75-201ENST00000384158 137 ntBASIC2.11□□□□□ -2.07
LIM2P55344 Y_RNA.553-201ENST00000384670 102 ntBASIC2.11□□□□□ -2.07
LIM2P55344 RNU6-606P-201ENST00000384721 111 ntBASIC2.11□□□□□ -2.07
LIM2P55344 MIR1302-8-201ENST00000408342 128 ntBASIC2.11□□□□□ -2.07
LIM2P55344 RNU6-1328P-201ENST00000410938 106 ntBASIC2.11□□□□□ -2.07
LIM2P55344 EEF1A1P40-201ENST00000412883 573 ntBASIC2.11□□□□□ -2.07
LIM2P55344 AL353621.1-201ENST00000418219 243 ntBASIC2.11□□□□□ -2.07
LIM2P55344 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
LIM2P55344 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC2.11□□□□□ -2.07
LIM2P55344 AL031667.1-201ENST00000440222 725 ntBASIC2.11□□□□□ -2.07
LIM2P55344 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.11□□□□□ -2.07
LIM2P55344 USP9YP29-201ENST00000445112 563 ntBASIC2.11□□□□□ -2.07
LIM2P55344 AC104058.1-201ENST00000448028 297 ntBASIC2.11□□□□□ -2.07
LIM2P55344 AC079448.1-201ENST00000449377 373 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms