Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 EEF1A1P41-201ENST00000414667 207 ntBASIC2.68□□□□□ -1.98
CDH13P55290 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CDH13P55290 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.68□□□□□ -1.98
CDH13P55290 MTCYBP8-201ENST00000422855 651 ntBASIC2.68□□□□□ -1.98
CDH13P55290 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.68□□□□□ -1.98
CDH13P55290 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CDH13P55290 MICF-203ENST00000432679 129 ntBASIC2.68□□□□□ -1.98
CDH13P55290 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.68□□□□□ -1.98
CDH13P55290 RPL7P54-201ENST00000438336 674 ntBASIC2.68□□□□□ -1.98
CDH13P55290 RPS15AP7-201ENST00000439294 405 ntBASIC2.68□□□□□ -1.98
CDH13P55290 AC009296.1-201ENST00000443146 155 ntBASIC2.68□□□□□ -1.98
CDH13P55290 HIGD1AP2-201ENST00000446367 280 ntBASIC2.68□□□□□ -1.98
CDH13P55290 AC006026.2-201ENST00000457376 180 ntBASIC2.68□□□□□ -1.98
CDH13P55290 SCARNA18-201ENST00000459004 134 ntBASIC2.68□□□□□ -1.98
CDH13P55290 RNU7-180P-201ENST00000459240 63 ntBASIC2.68□□□□□ -1.98
CDH13P55290 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CDH13P55290 AC098799.2-201ENST00000509466 868 ntBASIC2.68□□□□□ -1.98
CDH13P55290 AC009646.1-201ENST00000510455 318 ntBASIC2.68□□□□□ -1.98
CDH13P55290 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.68□□□□□ -1.98
CDH13P55290 Y_RNA.693-201ENST00000516641 110 ntBASIC2.68□□□□□ -1.98
CDH13P55290 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.68□□□□□ -1.98
CDH13P55290 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC2.68□□□□□ -1.98
CDH13P55290 AC022880.1-201ENST00000534017 973 ntBASIC2.68□□□□□ -1.98
CDH13P55290 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.68□□□□□ -1.98
CDH13P55290 AC007621.1-201ENST00000604544 437 ntBASIC2.68□□□□□ -1.98
CDH13P55290 RPL23AP88-201ENST00000605759 454 ntBASIC2.68□□□□□ -1.98
CDH13P55290 RNU6-91P-201ENST00000607774 107 ntBASIC2.68□□□□□ -1.98
CDH13P55290 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.68□□□□□ -1.98
CDH13P55290 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.68□□□□□ -1.98
CDH13P55290 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CDH13P55290 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.67□□□□□ -1.98
CDH13P55290 Y_RNA.409-201ENST00000383990 98 ntBASIC2.67□□□□□ -1.98
CDH13P55290 MIR627-201ENST00000384979 97 ntBASIC2.67□□□□□ -1.98
CDH13P55290 MIR181A1-201ENST00000385026 110 ntBASIC2.67□□□□□ -1.98
CDH13P55290 MIR147B-201ENST00000390185 80 ntBASIC2.67□□□□□ -1.98
CDH13P55290 SNORD70.1-201ENST00000391007 85 ntBASIC2.67□□□□□ -1.98
CDH13P55290 CIR1P3-201ENST00000405137 479 ntBASIC2.67□□□□□ -1.98
CDH13P55290 CYCSP33-201ENST00000414485 327 ntBASIC2.67□□□□□ -1.98
CDH13P55290 TOMM20P4-201ENST00000427861 435 ntBASIC2.67□□□□□ -1.98
CDH13P55290 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.67□□□□□ -1.98
CDH13P55290 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.67□□□□□ -1.98
CDH13P55290 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.67□□□□□ -1.98
CDH13P55290 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.67□□□□□ -1.98
CDH13P55290 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.67□□□□□ -1.98
CDH13P55290 RN7SKP57-201ENST00000517248 293 ntBASIC2.67□□□□□ -1.98
CDH13P55290 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.67□□□□□ -1.98
CDH13P55290 HMGB1P33-201ENST00000563485 527 ntBASIC2.67□□□□□ -1.98
CDH13P55290 AC106782.4-201ENST00000568264 210 ntBASIC2.67□□□□□ -1.98
CDH13P55290 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.67□□□□□ -1.98
CDH13P55290 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.67□□□□□ -1.98
CDH13P55290 AL162274.2-201ENST00000614406 332 ntBASIC2.67□□□□□ -1.98
CDH13P55290 AC010378.1-201ENST00000619270 362 ntBASIC2.67□□□□□ -1.98
CDH13P55290 AL031601.2-202ENST00000622650 282 ntBASIC2.67□□□□□ -1.98
CDH13P55290 CR381653.2-201ENST00000624041 768 ntBASIC2.67□□□□□ -1.98
CDH13P55290 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.67□□□□□ -1.98
CDH13P55290 MTND5P30-201ENST00000452896 1731 ntBASIC2.67□□□□□ -1.98
CDH13P55290 AL354685.2-201ENST00000448218 1447 ntBASIC2.67□□□□□ -1.98
CDH13P55290 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CDH13P55290 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
CDH13P55290 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.66□□□□□ -1.98
CDH13P55290 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CDH13P55290 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
CDH13P55290 RNU6-942P-201ENST00000363002 107 ntBASIC2.66□□□□□ -1.98
CDH13P55290 MIR592-201ENST00000384959 97 ntBASIC2.66□□□□□ -1.98
CDH13P55290 SNORA11.1-201ENST00000408133 129 ntBASIC2.66□□□□□ -1.98
CDH13P55290 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.66□□□□□ -1.98
CDH13P55290 AL139132.1-201ENST00000431587 344 ntBASIC2.66□□□□□ -1.98
CDH13P55290 AC112220.1-201ENST00000434628 355 ntBASIC2.66□□□□□ -1.98
CDH13P55290 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC2.66□□□□□ -1.98
CDH13P55290 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.66□□□□□ -1.98
CDH13P55290 AC008571.1-201ENST00000467232 300 ntBASIC2.66□□□□□ -1.98
CDH13P55290 MRPL42P6-201ENST00000486397 371 ntBASIC2.66□□□□□ -1.98
CDH13P55290 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.66□□□□□ -1.98
CDH13P55290 RNU2-69P-201ENST00000516061 100 ntBASIC2.66□□□□□ -1.98
CDH13P55290 SNORA31.6-201ENST00000516241 130 ntBASIC2.66□□□□□ -1.98
CDH13P55290 RNU5B-3P-201ENST00000516601 115 ntBASIC2.66□□□□□ -1.98
CDH13P55290 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.66□□□□□ -1.98
CDH13P55290 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.66□□□□□ -1.98
CDH13P55290 AL512360.1-201ENST00000555346 234 ntBASIC2.66□□□□□ -1.98
CDH13P55290 ZNF519P2-201ENST00000557032 169 ntBASIC2.66□□□□□ -1.98
CDH13P55290 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
CDH13P55290 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.66□□□□□ -1.98
CDH13P55290 MIR3616-201ENST00000584070 92 ntBASIC2.66□□□□□ -1.98
CDH13P55290 MIR4424-201ENST00000585257 86 ntBASIC2.66□□□□□ -1.98
CDH13P55290 AL670379.10-201ENST00000604330 253 ntBASIC2.66□□□□□ -1.98
CDH13P55290 AL670379.9-201ENST00000605428 253 ntBASIC2.66□□□□□ -1.98
CDH13P55290 AC092954.2-201ENST00000609103 430 ntBASIC2.66□□□□□ -1.98
CDH13P55290 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.66□□□□□ -1.98
CDH13P55290 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
CDH13P55290 AC138627.2-201ENST00000624202 601 ntBASIC2.66□□□□□ -1.98
CDH13P55290 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.66□□□□□ -1.98
CDH13P55290 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.66□□□□□ -1.98
CDH13P55290 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.66□□□□□ -1.98
CDH13P55290 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.98
CDH13P55290 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.98
CDH13P55290 Y_RNA.3-201ENST00000362331 103 ntBASIC2.65□□□□□ -1.99
CDH13P55290 Y_RNA.381-201ENST00000365666 102 ntBASIC2.65□□□□□ -1.99
CDH13P55290 SNORA69-201ENST00000383895 132 ntBASIC2.65□□□□□ -1.99
CDH13P55290 SNORA16.2-201ENST00000390991 127 ntBASIC2.65□□□□□ -1.99
CDH13P55290 FTH1P15-201ENST00000406984 280 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms