Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AC026241.1-201ENST00000517873 2142 ntBASIC3.09□□□□□ -1.91
NR1H2P55055 GLYCAM1-201ENST00000546596 285 ntBASIC3.09□□□□□ -1.91
NR1H2P55055 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.09□□□□□ -1.91
NR1H2P55055 AP000787.2-201ENST00000604432 568 ntBASIC3.09□□□□□ -1.91
NR1H2P55055 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.09□□□□□ -1.91
NR1H2P55055 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.09□□□□□ -1.91
NR1H2P55055 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.09□□□□□ -1.91
NR1H2P55055 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
NR1H2P55055 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
NR1H2P55055 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
NR1H2P55055 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.08□□□□□ -1.92
NR1H2P55055 Y_RNA.231-201ENST00000364358 102 ntBASIC3.08□□□□□ -1.92
NR1H2P55055 SNORD14B-201ENST00000364533 90 ntBASIC3.08□□□□□ -1.92
NR1H2P55055 RNU6-898P-201ENST00000365627 104 ntBASIC3.08□□□□□ -1.92
NR1H2P55055 Y_RNA.390-201ENST00000383932 102 ntBASIC3.08□□□□□ -1.92
NR1H2P55055 SNORA75B-201ENST00000384053 137 ntBASIC3.08□□□□□ -1.92
NR1H2P55055 MIR518D-201ENST00000385014 87 ntBASIC3.08□□□□□ -1.92
NR1H2P55055 MIR514A2-201ENST00000385131 88 ntBASIC3.08□□□□□ -1.92
NR1H2P55055 MIR514A3-201ENST00000385132 88 ntBASIC3.08□□□□□ -1.92
NR1H2P55055 RNU6-332P-201ENST00000391193 108 ntBASIC3.08□□□□□ -1.92
NR1H2P55055 RNU6-373P-201ENST00000411247 98 ntBASIC3.08□□□□□ -1.92
NR1H2P55055 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.08□□□□□ -1.92
NR1H2P55055 DBIP2-201ENST00000419076 262 ntBASIC3.08□□□□□ -1.92
NR1H2P55055 RPL30P16-201ENST00000419341 429 ntBASIC3.08□□□□□ -1.92
NR1H2P55055 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.08□□□□□ -1.92
NR1H2P55055 AL669831.1-202ENST00000428504 417 ntBASIC3.08□□□□□ -1.92
NR1H2P55055 CST9LP2-201ENST00000437612 320 ntBASIC3.08□□□□□ -1.92
NR1H2P55055 AL121601.2-201ENST00000438019 707 ntBASIC3.08□□□□□ -1.92
NR1H2P55055 GTF2IP13-201ENST00000438487 386 ntBASIC3.08□□□□□ -1.92
NR1H2P55055 Z96811.1-201ENST00000445880 108 ntBASIC3.08□□□□□ -1.92
NR1H2P55055 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.08□□□□□ -1.92
NR1H2P55055 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.08□□□□□ -1.92
NR1H2P55055 MTCYBP18-201ENST00000501056 747 ntBASIC3.08□□□□□ -1.92
NR1H2P55055 AC091885.1-201ENST00000506658 268 ntBASIC3.08□□□□□ -1.92
NR1H2P55055 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.08□□□□□ -1.92
NR1H2P55055 SNORA31.18-201ENST00000517043 134 ntBASIC3.08□□□□□ -1.92
NR1H2P55055 AP004607.1-201ENST00000524456 203 ntBASIC3.08□□□□□ -1.92
NR1H2P55055 AF235103.2-201ENST00000525753 346 ntBASIC3.08□□□□□ -1.92
NR1H2P55055 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC3.08□□□□□ -1.92
NR1H2P55055 AL118558.2-201ENST00000556294 238 ntBASIC3.08□□□□□ -1.92
NR1H2P55055 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.08□□□□□ -1.92
NR1H2P55055 AC005261.5-201ENST00000596280 355 ntBASIC3.08□□□□□ -1.92
NR1H2P55055 RNU6-89P-201ENST00000606519 100 ntBASIC3.08□□□□□ -1.92
NR1H2P55055 AC069234.5-201ENST00000611056 416 ntBASIC3.08□□□□□ -1.92
NR1H2P55055 RMST_4.1-201ENST00000616886 107 ntBASIC3.08□□□□□ -1.92
NR1H2P55055 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC3.08□□□□□ -1.92
NR1H2P55055 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.08□□□□□ -1.92
NR1H2P55055 AP003400.5-201ENST00000624827 617 ntBASIC3.08□□□□□ -1.92
NR1H2P55055 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
NR1H2P55055 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
NR1H2P55055 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.07□□□□□ -1.92
NR1H2P55055 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.07□□□□□ -1.92
NR1H2P55055 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.07□□□□□ -1.92
NR1H2P55055 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
NR1H2P55055 Y_RNA.480-201ENST00000384364 102 ntBASIC3.07□□□□□ -1.92
NR1H2P55055 MIR10A-201ENST00000385043 110 ntBASIC3.07□□□□□ -1.92
NR1H2P55055 SNORA16.2-201ENST00000390991 127 ntBASIC3.07□□□□□ -1.92
NR1H2P55055 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.07□□□□□ -1.92
NR1H2P55055 AL592114.1-201ENST00000403842 483 ntBASIC3.07□□□□□ -1.92
NR1H2P55055 RPS4XP7-201ENST00000406274 780 ntBASIC3.07□□□□□ -1.92
NR1H2P55055 AL031121.1-201ENST00000406553 254 ntBASIC3.07□□□□□ -1.92
NR1H2P55055 RN7SKP111-201ENST00000410349 271 ntBASIC3.07□□□□□ -1.92
NR1H2P55055 RNA5SP118-201ENST00000410385 109 ntBASIC3.07□□□□□ -1.92
NR1H2P55055 RNA5SP120-201ENST00000410900 112 ntBASIC3.07□□□□□ -1.92
NR1H2P55055 AL139413.1-201ENST00000421309 217 ntBASIC3.07□□□□□ -1.92
NR1H2P55055 SRIP2-201ENST00000428470 166 ntBASIC3.07□□□□□ -1.92
NR1H2P55055 ERLEC1P1-201ENST00000433806 578 ntBASIC3.07□□□□□ -1.92
NR1H2P55055 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.07□□□□□ -1.92
NR1H2P55055 HIGD1AP2-201ENST00000446367 280 ntBASIC3.07□□□□□ -1.92
NR1H2P55055 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.07□□□□□ -1.92
NR1H2P55055 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.07□□□□□ -1.92
NR1H2P55055 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.07□□□□□ -1.92
NR1H2P55055 RN7SKP43-201ENST00000516173 320 ntBASIC3.07□□□□□ -1.92
NR1H2P55055 RNU6-581P-201ENST00000516214 105 ntBASIC3.07□□□□□ -1.92
NR1H2P55055 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.07□□□□□ -1.92
NR1H2P55055 AC078814.3-201ENST00000553036 491 ntBASIC3.07□□□□□ -1.92
NR1H2P55055 MIR3616-201ENST00000584070 92 ntBASIC3.07□□□□□ -1.92
NR1H2P55055 AC060780.3-201ENST00000589464 80 ntBASIC3.07□□□□□ -1.92
NR1H2P55055 AC012119.1-201ENST00000603184 222 ntBASIC3.07□□□□□ -1.92
NR1H2P55055 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.07□□□□□ -1.92
NR1H2P55055 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
NR1H2P55055 Z82243.1-201ENST00000609432 473 ntBASIC3.07□□□□□ -1.92
NR1H2P55055 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.07□□□□□ -1.92
NR1H2P55055 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.07□□□□□ -1.92
NR1H2P55055 WT1-AS_8.1-201ENST00000615200 275 ntBASIC3.07□□□□□ -1.92
NR1H2P55055 U4.6-201ENST00000621618 127 ntBASIC3.07□□□□□ -1.92
NR1H2P55055 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.07□□□□□ -1.92
NR1H2P55055 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
NR1H2P55055 CASC19-280ENST00000642102 1351 ntBASIC3.07□□□□□ -1.92
NR1H2P55055 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
NR1H2P55055 AC108206.1-201ENST00000570186 4159 ntBASIC3.07□□□□□ -1.92
NR1H2P55055 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
NR1H2P55055 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
NR1H2P55055 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
NR1H2P55055 AC138393.1-203ENST00000327086 343 ntBASIC3.06□□□□□ -1.92
NR1H2P55055 RNU4-35P-201ENST00000362588 141 ntBASIC3.06□□□□□ -1.92
NR1H2P55055 Y_RNA.378-201ENST00000365652 113 ntBASIC3.06□□□□□ -1.92
NR1H2P55055 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.06□□□□□ -1.92
NR1H2P55055 Y_RNA.615-201ENST00000410769 117 ntBASIC3.06□□□□□ -1.92
NR1H2P55055 RNU6-607P-201ENST00000411283 108 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms