Protein–RNA interactions for Protein: P46779

RPL28, 60S ribosomal protein L28, humanhuman

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28P46779 MIR597-201ENST00000384968 97 ntBASIC1.07□□□□□ -2.24
RPL28P46779 RNU11-3P-201ENST00000391111 133 ntBASIC1.07□□□□□ -2.24
RPL28P46779 RNU6-1025P-201ENST00000410629 104 ntBASIC1.07□□□□□ -2.24
RPL28P46779 RN7SKP51-201ENST00000410781 304 ntBASIC1.07□□□□□ -2.24
RPL28P46779 AC138623.1-201ENST00000418060 216 ntBASIC1.07□□□□□ -2.24
RPL28P46779 AC007098.1-201ENST00000420122 367 ntBASIC1.07□□□□□ -2.24
RPL28P46779 OOSP1P1-201ENST00000423265 274 ntBASIC1.07□□□□□ -2.24
RPL28P46779 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC1.07□□□□□ -2.24
RPL28P46779 TIMM9P1-201ENST00000436122 256 ntBASIC1.07□□□□□ -2.24
RPL28P46779 RPL7P54-201ENST00000438336 674 ntBASIC1.07□□□□□ -2.24
RPL28P46779 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.07□□□□□ -2.24
RPL28P46779 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.07□□□□□ -2.24
RPL28P46779 HMGN2P23-201ENST00000456759 269 ntBASIC1.07□□□□□ -2.24
RPL28P46779 RNA5SP57-201ENST00000459463 123 ntBASIC1.07□□□□□ -2.24
RPL28P46779 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.07□□□□□ -2.24
RPL28P46779 PTP4A1P4-201ENST00000512479 322 ntBASIC1.07□□□□□ -2.24
RPL28P46779 AC010376.1-201ENST00000522101 334 ntBASIC1.07□□□□□ -2.24
RPL28P46779 EEF1A1P37-201ENST00000522748 715 ntBASIC1.07□□□□□ -2.24
RPL28P46779 AP004607.1-201ENST00000524456 203 ntBASIC1.07□□□□□ -2.24
RPL28P46779 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.07□□□□□ -2.24
RPL28P46779 AC135279.1-201ENST00000543493 504 ntBASIC1.07□□□□□ -2.24
RPL28P46779 MTCYBP23-201ENST00000558717 1102 ntBASIC1.07□□□□□ -2.24
RPL28P46779 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC1.07□□□□□ -2.24
RPL28P46779 AC136618.2-201ENST00000575091 400 ntBASIC1.07□□□□□ -2.24
RPL28P46779 AL670379.6-201ENST00000603753 252 ntBASIC1.07□□□□□ -2.24
RPL28P46779 AL670379.11-201ENST00000604059 253 ntBASIC1.07□□□□□ -2.24
RPL28P46779 AC008162.1-201ENST00000604718 254 ntBASIC1.07□□□□□ -2.24
RPL28P46779 AL670379.1-201ENST00000604752 252 ntBASIC1.07□□□□□ -2.24
RPL28P46779 AL670379.5-201ENST00000605253 252 ntBASIC1.07□□□□□ -2.24
RPL28P46779 AL670379.12-201ENST00000605291 253 ntBASIC1.07□□□□□ -2.24
RPL28P46779 BCRP9-201ENST00000605312 388 ntBASIC1.07□□□□□ -2.24
RPL28P46779 AL670379.8-201ENST00000605353 252 ntBASIC1.07□□□□□ -2.24
RPL28P46779 AL670379.7-201ENST00000605823 252 ntBASIC1.07□□□□□ -2.24
RPL28P46779 AL365204.3-201ENST00000612448 685 ntBASIC1.07□□□□□ -2.24
RPL28P46779 AC092656.1-203ENST00000624134 423 ntBASIC1.07□□□□□ -2.24
RPL28P46779 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
RPL28P46779 MTND5P10-201ENST00000603719 1809 ntBASIC1.06□□□□□ -2.24
RPL28P46779 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
RPL28P46779 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.06□□□□□ -2.24
RPL28P46779 RNU1-58P-201ENST00000362413 163 ntBASIC1.06□□□□□ -2.24
RPL28P46779 RNU6-529P-201ENST00000363383 104 ntBASIC1.06□□□□□ -2.24
RPL28P46779 SMIM11P1-201ENST00000369586 178 ntBASIC1.06□□□□□ -2.24
RPL28P46779 RNU6-546P-201ENST00000383991 107 ntBASIC1.06□□□□□ -2.24
RPL28P46779 AL079342.1-201ENST00000401460 267 ntBASIC1.06□□□□□ -2.24
RPL28P46779 MIR1294-201ENST00000408503 142 ntBASIC1.06□□□□□ -2.24
RPL28P46779 RNU6-955P-201ENST00000410497 104 ntBASIC1.06□□□□□ -2.24
RPL28P46779 SRIP3-201ENST00000413200 219 ntBASIC1.06□□□□□ -2.24
RPL28P46779 VPS26BP1-201ENST00000417155 755 ntBASIC1.06□□□□□ -2.24
RPL28P46779 AC016831.2-201ENST00000417179 352 ntBASIC1.06□□□□□ -2.24
RPL28P46779 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.06□□□□□ -2.24
RPL28P46779 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.06□□□□□ -2.24
RPL28P46779 MTCO3P5-201ENST00000433620 714 ntBASIC1.06□□□□□ -2.24
RPL28P46779 AL645568.3-201ENST00000433683 316 ntBASIC1.06□□□□□ -2.24
RPL28P46779 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.06□□□□□ -2.24
RPL28P46779 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC1.06□□□□□ -2.24
RPL28P46779 AL606517.1-201ENST00000446914 387 ntBASIC1.06□□□□□ -2.24
RPL28P46779 UBL5P3-201ENST00000475112 231 ntBASIC1.06□□□□□ -2.24
RPL28P46779 RPL23AP63-201ENST00000498752 471 ntBASIC1.06□□□□□ -2.24
RPL28P46779 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.06□□□□□ -2.24
RPL28P46779 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.06□□□□□ -2.24
RPL28P46779 AC116353.3-201ENST00000511215 249 ntBASIC1.06□□□□□ -2.24
RPL28P46779 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.06□□□□□ -2.24
RPL28P46779 AC117532.1-201ENST00000514638 323 ntBASIC1.06□□□□□ -2.24
RPL28P46779 RNU6-914P-201ENST00000516749 109 ntBASIC1.06□□□□□ -2.24
RPL28P46779 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.06□□□□□ -2.24
RPL28P46779 AC022616.8-201ENST00000533569 253 ntBASIC1.06□□□□□ -2.24
RPL28P46779 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.06□□□□□ -2.24
RPL28P46779 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.06□□□□□ -2.24
RPL28P46779 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.06□□□□□ -2.24
RPL28P46779 AL157871.3-201ENST00000557231 293 ntBASIC1.06□□□□□ -2.24
RPL28P46779 AC025678.1-201ENST00000567861 338 ntBASIC1.06□□□□□ -2.24
RPL28P46779 MIR1273C-201ENST00000578669 77 ntBASIC1.06□□□□□ -2.24
RPL28P46779 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.06□□□□□ -2.24
RPL28P46779 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.06□□□□□ -2.24
RPL28P46779 BNIP3P30-201ENST00000601184 574 ntBASIC1.06□□□□□ -2.24
RPL28P46779 AC010900.2-201ENST00000604508 210 ntBASIC1.06□□□□□ -2.24
RPL28P46779 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.06□□□□□ -2.24
RPL28P46779 AC097468.3-201ENST00000607956 456 ntBASIC1.06□□□□□ -2.24
RPL28P46779 AC012360.2-201ENST00000609349 391 ntBASIC1.06□□□□□ -2.24
RPL28P46779 Z82243.1-201ENST00000609432 473 ntBASIC1.06□□□□□ -2.24
RPL28P46779 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC1.06□□□□□ -2.24
RPL28P46779 AC099842.1-201ENST00000619919 596 ntBASIC1.06□□□□□ -2.24
RPL28P46779 MIR3529-201ENST00000637713 78 ntBASIC1.06□□□□□ -2.24
RPL28P46779 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.06□□□□□ -2.24
RPL28P46779 ZNF680P1-201ENST00000436625 1469 ntBASIC1.05□□□□□ -2.24
RPL28P46779 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.05□□□□□ -2.24
RPL28P46779 MIR424-201ENST00000362227 98 ntBASIC1.05□□□□□ -2.24
RPL28P46779 RNU6-942P-201ENST00000363002 107 ntBASIC1.05□□□□□ -2.24
RPL28P46779 RNU6-622P-201ENST00000384272 103 ntBASIC1.05□□□□□ -2.24
RPL28P46779 RNU6-769P-201ENST00000384407 104 ntBASIC1.05□□□□□ -2.24
RPL28P46779 MIR30A-201ENST00000385092 71 ntBASIC1.05□□□□□ -2.24
RPL28P46779 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
RPL28P46779 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
RPL28P46779 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.05□□□□□ -2.24
RPL28P46779 RPL23AP39-201ENST00000415533 405 ntBASIC1.05□□□□□ -2.24
RPL28P46779 AC074117.2-201ENST00000417130 397 ntBASIC1.05□□□□□ -2.24
RPL28P46779 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC1.05□□□□□ -2.24
RPL28P46779 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC1.05□□□□□ -2.24
RPL28P46779 USP9YP18-201ENST00000425912 695 ntBASIC1.05□□□□□ -2.24
RPL28P46779 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 122.1 ms