Protein–RNA interactions for Protein: P31431

SDC4, Syndecan-4, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P31431 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
SDC4P31431 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.84□□□□□ -2.27
SDC4P31431 NACAP2-201ENST00000318548 624 ntBASIC0.84□□□□□ -2.27
SDC4P31431 MIR373-201ENST00000362273 69 ntBASIC0.84□□□□□ -2.27
SDC4P31431 RNA5SP327-201ENST00000362494 101 ntBASIC0.84□□□□□ -2.27
SDC4P31431 RNU6-1066P-201ENST00000363573 105 ntBASIC0.84□□□□□ -2.27
SDC4P31431 HMGN1P14-201ENST00000412459 517 ntBASIC0.84□□□□□ -2.27
SDC4P31431 MTCO2P5-201ENST00000422621 426 ntBASIC0.84□□□□□ -2.27
SDC4P31431 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC0.84□□□□□ -2.27
SDC4P31431 AC010153.1-201ENST00000432862 727 ntBASIC0.84□□□□□ -2.27
SDC4P31431 MTND1P9-201ENST00000453775 944 ntBASIC0.84□□□□□ -2.27
SDC4P31431 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC0.84□□□□□ -2.27
SDC4P31431 RNU6-581P-201ENST00000516214 105 ntBASIC0.84□□□□□ -2.27
SDC4P31431 RNU5B-3P-201ENST00000516601 115 ntBASIC0.84□□□□□ -2.27
SDC4P31431 ACA59.2-201ENST00000517061 156 ntBASIC0.84□□□□□ -2.27
SDC4P31431 AC073544.2-201ENST00000601155 540 ntBASIC0.84□□□□□ -2.27
SDC4P31431 WISP1-OT1-201ENST00000602893 642 ntBASIC0.84□□□□□ -2.27
SDC4P31431 AL139344.1-201ENST00000605228 195 ntBASIC0.84□□□□□ -2.27
SDC4P31431 AC211469.2-201ENST00000605461 205 ntBASIC0.84□□□□□ -2.27
SDC4P31431 AL355472.4-201ENST00000610233 626 ntBASIC0.84□□□□□ -2.27
SDC4P31431 AC009237.15-201ENST00000610252 501 ntBASIC0.84□□□□□ -2.27
SDC4P31431 AP003485.1-201ENST00000625093 753 ntBASIC0.84□□□□□ -2.27
SDC4P31431 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
SDC4P31431 AC138393.1-203ENST00000327086 343 ntBASIC0.83□□□□□ -2.28
SDC4P31431 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC0.83□□□□□ -2.28
SDC4P31431 RNU6-26P-201ENST00000383985 107 ntBASIC0.83□□□□□ -2.28
SDC4P31431 RNU6-1222P-201ENST00000384615 107 ntBASIC0.83□□□□□ -2.28
SDC4P31431 RNU6-754P-201ENST00000391166 107 ntBASIC0.83□□□□□ -2.28
SDC4P31431 RN7SKP61-201ENST00000410642 295 ntBASIC0.83□□□□□ -2.28
SDC4P31431 NCOR1P3-201ENST00000420479 303 ntBASIC0.83□□□□□ -2.28
SDC4P31431 USP9YP26-201ENST00000421008 661 ntBASIC0.83□□□□□ -2.28
SDC4P31431 AC139712.2-201ENST00000424302 339 ntBASIC0.83□□□□□ -2.28
SDC4P31431 RPS27P16-201ENST00000425758 201 ntBASIC0.83□□□□□ -2.28
SDC4P31431 USP9YP18-201ENST00000425912 695 ntBASIC0.83□□□□□ -2.28
SDC4P31431 USP9YP17-201ENST00000444617 696 ntBASIC0.83□□□□□ -2.28
SDC4P31431 RPL39P6-201ENST00000448289 150 ntBASIC0.83□□□□□ -2.28
SDC4P31431 RNU6-678P-201ENST00000516832 109 ntBASIC0.83□□□□□ -2.28
SDC4P31431 AC022861.1-201ENST00000522981 663 ntBASIC0.83□□□□□ -2.28
SDC4P31431 MIR4666A-201ENST00000580160 79 ntBASIC0.83□□□□□ -2.28
SDC4P31431 MIR4637-201ENST00000582405 84 ntBASIC0.83□□□□□ -2.28
SDC4P31431 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC0.83□□□□□ -2.28
SDC4P31431 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
SDC4P31431 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC0.83□□□□□ -2.28
SDC4P31431 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC0.83□□□□□ -2.28
SDC4P31431 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.83□□□□□ -2.28
SDC4P31431 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.82□□□□□ -2.28
SDC4P31431 MIR302D-201ENST00000362275 68 ntBASIC0.82□□□□□ -2.28
SDC4P31431 Y_RNA.4-201ENST00000362333 112 ntBASIC0.82□□□□□ -2.28
SDC4P31431 RNU6-1167P-201ENST00000363227 94 ntBASIC0.82□□□□□ -2.28
SDC4P31431 RNU1-93P-201ENST00000364704 169 ntBASIC0.82□□□□□ -2.28
SDC4P31431 RNU6-359P-201ENST00000365466 108 ntBASIC0.82□□□□□ -2.28
SDC4P31431 MIR1276-201ENST00000408707 83 ntBASIC0.82□□□□□ -2.28
SDC4P31431 AL022400.1-201ENST00000423946 935 ntBASIC0.82□□□□□ -2.28
SDC4P31431 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC0.82□□□□□ -2.28
SDC4P31431 DUXAP8-207ENST00000456786 622 ntBASIC0.82□□□□□ -2.28
SDC4P31431 AP001025.1-201ENST00000486139 332 ntBASIC0.82□□□□□ -2.28
SDC4P31431 UBL5P1-201ENST00000507979 193 ntBASIC0.82□□□□□ -2.28
SDC4P31431 MTND5P13-201ENST00000513046 1079 ntBASIC0.82□□□□□ -2.28
SDC4P31431 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC0.82□□□□□ -2.28
SDC4P31431 RNA5SP404-201ENST00000517118 132 ntBASIC0.82□□□□□ -2.28
SDC4P31431 AC109329.1-201ENST00000518744 317 ntBASIC0.82□□□□□ -2.28
SDC4P31431 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.82□□□□□ -2.28
SDC4P31431 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC0.82□□□□□ -2.28
SDC4P31431 AC091057.3-201ENST00000602684 733 ntBASIC0.82□□□□□ -2.28
SDC4P31431 AC108706.1-201ENST00000611053 297 ntBASIC0.82□□□□□ -2.28
SDC4P31431 AL078604.3-201ENST00000615580 211 ntBASIC0.82□□□□□ -2.28
SDC4P31431 AL132822.1-201ENST00000617063 513 ntBASIC0.82□□□□□ -2.28
SDC4P31431 AC009268.2-201ENST00000621925 457 ntBASIC0.82□□□□□ -2.28
SDC4P31431 AL391516.1-201ENST00000554380 2449 ntBASIC0.81□□□□□ -2.28
SDC4P31431 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
SDC4P31431 RNU6-28P-201ENST00000362378 107 ntBASIC0.81□□□□□ -2.28
SDC4P31431 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.81□□□□□ -2.28
SDC4P31431 AL133475.1-201ENST00000404414 305 ntBASIC0.81□□□□□ -2.28
SDC4P31431 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.81□□□□□ -2.28
SDC4P31431 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.81□□□□□ -2.28
SDC4P31431 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC0.81□□□□□ -2.28
SDC4P31431 PRPS1P1-201ENST00000445305 876 ntBASIC0.81□□□□□ -2.28
SDC4P31431 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC0.81□□□□□ -2.28
SDC4P31431 FTH1P25-201ENST00000447665 469 ntBASIC0.81□□□□□ -2.28
SDC4P31431 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC0.81□□□□□ -2.28
SDC4P31431 snoU13.8-201ENST00000458890 104 ntBASIC0.81□□□□□ -2.28
SDC4P31431 RPL7P43-201ENST00000478876 753 ntBASIC0.81□□□□□ -2.28
SDC4P31431 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC0.81□□□□□ -2.28
SDC4P31431 MTCYBP43-201ENST00000513621 740 ntBASIC0.81□□□□□ -2.28
SDC4P31431 SNORA31.17-201ENST00000516953 127 ntBASIC0.81□□□□□ -2.28
SDC4P31431 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC0.81□□□□□ -2.28
SDC4P31431 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC0.81□□□□□ -2.28
SDC4P31431 AC136932.1-201ENST00000574771 208 ntBASIC0.81□□□□□ -2.28
SDC4P31431 SNORA77B-201ENST00000578179 125 ntBASIC0.81□□□□□ -2.28
SDC4P31431 RPL30P11-203ENST00000598995 310 ntBASIC0.81□□□□□ -2.28
SDC4P31431 AL390208.1-201ENST00000605885 644 ntBASIC0.81□□□□□ -2.28
SDC4P31431 MIR6134-201ENST00000617606 109 ntBASIC0.81□□□□□ -2.28
SDC4P31431 AC012676.2-201ENST00000619258 186 ntBASIC0.81□□□□□ -2.28
SDC4P31431 AC084824.4-201ENST00000620106 731 ntBASIC0.81□□□□□ -2.28
SDC4P31431 MIR6866-201ENST00000638146 69 ntBASIC0.81□□□□□ -2.28
SDC4P31431 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.81□□□□□ -2.28
SDC4P31431 OR4G1P-203ENST00000641984 1631 ntBASIC0.81□□□□□ -2.28
SDC4P31431 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
SDC4P31431 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
SDC4P31431 SNORD33-201ENST00000362761 85 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 143.7 ms