Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 RNU6-946P-201ENST00000383878 107 ntBASIC3.22□□□□□ -1.89
HOXA11P31270 Y_RNA.419-201ENST00000384041 102 ntBASIC3.22□□□□□ -1.89
HOXA11P31270 UBE2V1P2-201ENST00000397758 440 ntBASIC3.22□□□□□ -1.89
HOXA11P31270 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC3.22□□□□□ -1.89
HOXA11P31270 VN1R36P-201ENST00000414936 291 ntBASIC3.22□□□□□ -1.89
HOXA11P31270 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.22□□□□□ -1.89
HOXA11P31270 AC236972.2-201ENST00000434979 310 ntBASIC3.22□□□□□ -1.89
HOXA11P31270 NDUFA5P4-201ENST00000436704 385 ntBASIC3.22□□□□□ -1.89
HOXA11P31270 AC020550.1-201ENST00000447385 163 ntBASIC3.22□□□□□ -1.89
HOXA11P31270 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.22□□□□□ -1.89
HOXA11P31270 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.22□□□□□ -1.89
HOXA11P31270 RNU7-152P-201ENST00000458982 64 ntBASIC3.22□□□□□ -1.89
HOXA11P31270 TRBVA-201ENST00000498804 316 ntBASIC3.22□□□□□ -1.89
HOXA11P31270 AC083906.5-201ENST00000503722 328 ntBASIC3.22□□□□□ -1.89
HOXA11P31270 HIGD1AP13-201ENST00000509878 289 ntBASIC3.22□□□□□ -1.89
HOXA11P31270 AC108078.2-201ENST00000510750 236 ntBASIC3.22□□□□□ -1.89
HOXA11P31270 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.22□□□□□ -1.89
HOXA11P31270 AC026801.2-201ENST00000515352 425 ntBASIC3.22□□□□□ -1.89
HOXA11P31270 SNORA31.3-201ENST00000516029 96 ntBASIC3.22□□□□□ -1.89
HOXA11P31270 SNORA25.17-201ENST00000517184 124 ntBASIC3.22□□□□□ -1.89
HOXA11P31270 AP000889.2-201ENST00000532684 490 ntBASIC3.22□□□□□ -1.89
HOXA11P31270 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HOXA11P31270 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HOXA11P31270 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HOXA11P31270 AC093012.1-202ENST00000549403 582 ntBASIC3.22□□□□□ -1.89
HOXA11P31270 CYCSP39-201ENST00000565821 309 ntBASIC3.22□□□□□ -1.89
HOXA11P31270 AL450472.3-201ENST00000615578 367 ntBASIC3.22□□□□□ -1.89
HOXA11P31270 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.22□□□□□ -1.89
HOXA11P31270 MIR6852-201ENST00000621699 66 ntBASIC3.22□□□□□ -1.89
HOXA11P31270 AC007998.5-201ENST00000622938 237 ntBASIC3.22□□□□□ -1.89
HOXA11P31270 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.22□□□□□ -1.89
HOXA11P31270 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.22□□□□□ -1.89
HOXA11P31270 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HOXA11P31270 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.22□□□□□ -1.89
HOXA11P31270 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.21□□□□□ -1.9
HOXA11P31270 RNU6-7-201ENST00000364784 107 ntBASIC3.21□□□□□ -1.9
HOXA11P31270 RNU6-8-201ENST00000365467 107 ntBASIC3.21□□□□□ -1.9
HOXA11P31270 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
HOXA11P31270 Y_RNA.384-201ENST00000383909 102 ntBASIC3.21□□□□□ -1.9
HOXA11P31270 Y_RNA.399-201ENST00000383955 105 ntBASIC3.21□□□□□ -1.9
HOXA11P31270 RNU6-1013P-201ENST00000384180 107 ntBASIC3.21□□□□□ -1.9
HOXA11P31270 RNU6-1127P-201ENST00000384580 107 ntBASIC3.21□□□□□ -1.9
HOXA11P31270 AL590004.1-201ENST00000405321 300 ntBASIC3.21□□□□□ -1.9
HOXA11P31270 MIR548K-201ENST00000408406 116 ntBASIC3.21□□□□□ -1.9
HOXA11P31270 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.21□□□□□ -1.9
HOXA11P31270 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.21□□□□□ -1.9
HOXA11P31270 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.21□□□□□ -1.9
HOXA11P31270 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.21□□□□□ -1.9
HOXA11P31270 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.21□□□□□ -1.9
HOXA11P31270 AC092573.2-201ENST00000434546 243 ntBASIC3.21□□□□□ -1.9
HOXA11P31270 RPS3AP52-201ENST00000435639 297 ntBASIC3.21□□□□□ -1.9
HOXA11P31270 GTF2IP13-201ENST00000438487 386 ntBASIC3.21□□□□□ -1.9
HOXA11P31270 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.21□□□□□ -1.9
HOXA11P31270 PPP1R2P5-201ENST00000457256 603 ntBASIC3.21□□□□□ -1.9
HOXA11P31270 Y_RNA.639-201ENST00000458981 102 ntBASIC3.21□□□□□ -1.9
HOXA11P31270 RPL21P93-201ENST00000480465 489 ntBASIC3.21□□□□□ -1.9
HOXA11P31270 RPL30P5-201ENST00000494923 336 ntBASIC3.21□□□□□ -1.9
HOXA11P31270 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.21□□□□□ -1.9
HOXA11P31270 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
HOXA11P31270 AC104806.1-201ENST00000508720 308 ntBASIC3.21□□□□□ -1.9
HOXA11P31270 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC3.21□□□□□ -1.9
HOXA11P31270 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.21□□□□□ -1.9
HOXA11P31270 RN7SKP132-201ENST00000516001 208 ntBASIC3.21□□□□□ -1.9
HOXA11P31270 SNORA31.22-201ENST00000517204 135 ntBASIC3.21□□□□□ -1.9
HOXA11P31270 AC090136.1-201ENST00000520009 240 ntBASIC3.21□□□□□ -1.9
HOXA11P31270 AP006587.4-201ENST00000526053 529 ntBASIC3.21□□□□□ -1.9
HOXA11P31270 MTCO3P13-201ENST00000577757 781 ntBASIC3.21□□□□□ -1.9
HOXA11P31270 MIR5583-1-201ENST00000580941 59 ntBASIC3.21□□□□□ -1.9
HOXA11P31270 RPL23AP78-201ENST00000599928 470 ntBASIC3.21□□□□□ -1.9
HOXA11P31270 CTHRC1P1-201ENST00000605383 469 ntBASIC3.21□□□□□ -1.9
HOXA11P31270 AL365204.3-201ENST00000612448 685 ntBASIC3.21□□□□□ -1.9
HOXA11P31270 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
HOXA11P31270 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.21□□□□□ -1.9
HOXA11P31270 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
HOXA11P31270 AC099654.7-201ENST00000635788 2127 ntBASIC3.2□□□□□ -1.9
HOXA11P31270 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
HOXA11P31270 RNU5A-1-201ENST00000362698 116 ntBASIC3.2□□□□□ -1.9
HOXA11P31270 U3.6-201ENST00000363622 211 ntBASIC3.2□□□□□ -1.9
HOXA11P31270 SNORD113-7-201ENST00000363762 77 ntBASIC3.2□□□□□ -1.9
HOXA11P31270 SNORA23-201ENST00000365128 182 ntBASIC3.2□□□□□ -1.9
HOXA11P31270 SNORA18.3-201ENST00000384122 132 ntBASIC3.2□□□□□ -1.9
HOXA11P31270 RNU6-851P-201ENST00000384565 107 ntBASIC3.2□□□□□ -1.9
HOXA11P31270 RNU6-14P-201ENST00000384630 106 ntBASIC3.2□□□□□ -1.9
HOXA11P31270 BTF3L4P3-201ENST00000418879 476 ntBASIC3.2□□□□□ -1.9
HOXA11P31270 AC245291.1-201ENST00000419501 328 ntBASIC3.2□□□□□ -1.9
HOXA11P31270 MTCO2P12-201ENST00000427426 682 ntBASIC3.2□□□□□ -1.9
HOXA11P31270 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.2□□□□□ -1.9
HOXA11P31270 TXNP1-201ENST00000441872 371 ntBASIC3.2□□□□□ -1.9
HOXA11P31270 RPS15AP27-201ENST00000449183 343 ntBASIC3.2□□□□□ -1.9
HOXA11P31270 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.2□□□□□ -1.9
HOXA11P31270 AC092185.1-201ENST00000491371 97 ntBASIC3.2□□□□□ -1.9
HOXA11P31270 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.2□□□□□ -1.9
HOXA11P31270 AC091826.1-201ENST00000514065 313 ntBASIC3.2□□□□□ -1.9
HOXA11P31270 SCGB1D5P-201ENST00000515134 247 ntBASIC3.2□□□□□ -1.9
HOXA11P31270 AP005597.4-201ENST00000526762 229 ntBASIC3.2□□□□□ -1.9
HOXA11P31270 HMGB1P14-201ENST00000557424 591 ntBASIC3.2□□□□□ -1.9
HOXA11P31270 AC020661.2-201ENST00000560114 134 ntBASIC3.2□□□□□ -1.9
HOXA11P31270 MIR3942-201ENST00000585264 109 ntBASIC3.2□□□□□ -1.9
HOXA11P31270 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.2□□□□□ -1.9
HOXA11P31270 DPPA3P3-201ENST00000603842 430 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 199.5 ms