Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 CDC27P3-201ENST00000635418 1910 ntBASIC2.38□□□□□ -2.03
PTPN4P29074 MIRLET7G-201ENST00000362280 84 ntBASIC2.38□□□□□ -2.03
PTPN4P29074 RNU6-486P-201ENST00000363116 107 ntBASIC2.38□□□□□ -2.03
PTPN4P29074 RNU2-39P-201ENST00000410604 198 ntBASIC2.38□□□□□ -2.03
PTPN4P29074 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.38□□□□□ -2.03
PTPN4P29074 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.38□□□□□ -2.03
PTPN4P29074 MTCO2P34-201ENST00000421994 607 ntBASIC2.38□□□□□ -2.03
PTPN4P29074 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.38□□□□□ -2.03
PTPN4P29074 BX276092.3-201ENST00000424182 230 ntBASIC2.38□□□□□ -2.03
PTPN4P29074 RPL31P35-201ENST00000431058 377 ntBASIC2.38□□□□□ -2.03
PTPN4P29074 AL121890.1-201ENST00000435457 205 ntBASIC2.38□□□□□ -2.03
PTPN4P29074 MTND4P32-201ENST00000437189 1237 ntBASIC2.38□□□□□ -2.03
PTPN4P29074 KATNBL1P3-201ENST00000443475 909 ntBASIC2.38□□□□□ -2.03
PTPN4P29074 AL513124.1-201ENST00000450410 614 ntBASIC2.38□□□□□ -2.03
PTPN4P29074 FABP5P13-201ENST00000452144 328 ntBASIC2.38□□□□□ -2.03
PTPN4P29074 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.38□□□□□ -2.03
PTPN4P29074 BTF3P15-201ENST00000455606 336 ntBASIC2.38□□□□□ -2.03
PTPN4P29074 AL121769.1-201ENST00000469473 401 ntBASIC2.38□□□□□ -2.03
PTPN4P29074 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
PTPN4P29074 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.38□□□□□ -2.03
PTPN4P29074 AC008549.1-201ENST00000512900 643 ntBASIC2.38□□□□□ -2.03
PTPN4P29074 MTCO3P28-201ENST00000513351 515 ntBASIC2.38□□□□□ -2.03
PTPN4P29074 RNA5SP112-201ENST00000515937 99 ntBASIC2.38□□□□□ -2.03
PTPN4P29074 SCARNA24.1-201ENST00000516465 137 ntBASIC2.38□□□□□ -2.03
PTPN4P29074 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC2.38□□□□□ -2.03
PTPN4P29074 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.38□□□□□ -2.03
PTPN4P29074 OR5B19P-201ENST00000531766 928 ntBASIC2.38□□□□□ -2.03
PTPN4P29074 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.38□□□□□ -2.03
PTPN4P29074 AC087883.1-201ENST00000551882 391 ntBASIC2.38□□□□□ -2.03
PTPN4P29074 AC006362.1-201ENST00000567392 174 ntBASIC2.38□□□□□ -2.03
PTPN4P29074 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.38□□□□□ -2.03
PTPN4P29074 MIR4528-201ENST00000577763 90 ntBASIC2.38□□□□□ -2.03
PTPN4P29074 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.38□□□□□ -2.03
PTPN4P29074 AC091152.3-201ENST00000604227 325 ntBASIC2.38□□□□□ -2.03
PTPN4P29074 AC007938.3-201ENST00000604965 623 ntBASIC2.38□□□□□ -2.03
PTPN4P29074 AC098614.4-201ENST00000607601 462 ntBASIC2.38□□□□□ -2.03
PTPN4P29074 AC109347.2-201ENST00000610220 349 ntBASIC2.38□□□□□ -2.03
PTPN4P29074 AC004908.3-201ENST00000610248 625 ntBASIC2.38□□□□□ -2.03
PTPN4P29074 MIR6715A-201ENST00000615929 79 ntBASIC2.38□□□□□ -2.03
PTPN4P29074 AC138649.3-201ENST00000622154 254 ntBASIC2.38□□□□□ -2.03
PTPN4P29074 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
PTPN4P29074 AL359854.1-201ENST00000614203 1594 ntBASIC2.37□□□□□ -2.03
PTPN4P29074 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.37□□□□□ -2.03
PTPN4P29074 Y_RNA.51-201ENST00000362725 102 ntBASIC2.37□□□□□ -2.03
PTPN4P29074 SNORA40C-201ENST00000391285 128 ntBASIC2.37□□□□□ -2.03
PTPN4P29074 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
PTPN4P29074 RNU6-1025P-201ENST00000410629 104 ntBASIC2.37□□□□□ -2.03
PTPN4P29074 AC092809.3-201ENST00000415453 231 ntBASIC2.37□□□□□ -2.03
PTPN4P29074 BX295541.1-201ENST00000417774 250 ntBASIC2.37□□□□□ -2.03
PTPN4P29074 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.37□□□□□ -2.03
PTPN4P29074 EIF4EP4-201ENST00000424916 578 ntBASIC2.37□□□□□ -2.03
PTPN4P29074 CALM2P2-201ENST00000428512 440 ntBASIC2.37□□□□□ -2.03
PTPN4P29074 WARS2P1-201ENST00000429678 537 ntBASIC2.37□□□□□ -2.03
PTPN4P29074 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.37□□□□□ -2.03
PTPN4P29074 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
PTPN4P29074 MTND1P29-201ENST00000448112 647 ntBASIC2.37□□□□□ -2.03
PTPN4P29074 MTCYBP1-201ENST00000454315 1119 ntBASIC2.37□□□□□ -2.03
PTPN4P29074 AC139453.3-201ENST00000493276 369 ntBASIC2.37□□□□□ -2.03
PTPN4P29074 LAMTOR3P2-201ENST00000504479 232 ntBASIC2.37□□□□□ -2.03
PTPN4P29074 MTND4P2-201ENST00000507767 1203 ntBASIC2.37□□□□□ -2.03
PTPN4P29074 AC079140.3-201ENST00000511111 550 ntBASIC2.37□□□□□ -2.03
PTPN4P29074 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.37□□□□□ -2.03
PTPN4P29074 RNU1-41P-201ENST00000516161 162 ntBASIC2.37□□□□□ -2.03
PTPN4P29074 RNU1-48P-201ENST00000516400 162 ntBASIC2.37□□□□□ -2.03
PTPN4P29074 MIR892C-201ENST00000516410 77 ntBASIC2.37□□□□□ -2.03
PTPN4P29074 RNA5SP82-201ENST00000516707 92 ntBASIC2.37□□□□□ -2.03
PTPN4P29074 RNU6-572P-201ENST00000516724 80 ntBASIC2.37□□□□□ -2.03
PTPN4P29074 SNORA31.19-201ENST00000517079 126 ntBASIC2.37□□□□□ -2.03
PTPN4P29074 AC090572.1-201ENST00000519251 160 ntBASIC2.37□□□□□ -2.03
PTPN4P29074 AP005902.1-201ENST00000521358 186 ntBASIC2.37□□□□□ -2.03
PTPN4P29074 OR4R1P-201ENST00000529879 463 ntBASIC2.37□□□□□ -2.03
PTPN4P29074 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.37□□□□□ -2.03
PTPN4P29074 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC2.37□□□□□ -2.03
PTPN4P29074 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC2.37□□□□□ -2.03
PTPN4P29074 AC012213.3-201ENST00000577199 777 ntBASIC2.37□□□□□ -2.03
PTPN4P29074 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.37□□□□□ -2.03
PTPN4P29074 AL022154.1-201ENST00000604698 785 ntBASIC2.37□□□□□ -2.03
PTPN4P29074 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.37□□□□□ -2.03
PTPN4P29074 AC006566.1-201ENST00000608943 513 ntBASIC2.37□□□□□ -2.03
PTPN4P29074 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.37□□□□□ -2.03
PTPN4P29074 AC009090.3-201ENST00000616553 565 ntBASIC2.37□□□□□ -2.03
PTPN4P29074 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
PTPN4P29074 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
PTPN4P29074 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
PTPN4P29074 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
PTPN4P29074 AL139276.1-201ENST00000311910 1001 ntBASIC2.36□□□□□ -2.03
PTPN4P29074 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.36□□□□□ -2.03
PTPN4P29074 MIR518C-201ENST00000384822 101 ntBASIC2.36□□□□□ -2.03
PTPN4P29074 U6atac.2-201ENST00000408644 118 ntBASIC2.36□□□□□ -2.03
PTPN4P29074 CDK8P2-201ENST00000415020 547 ntBASIC2.36□□□□□ -2.03
PTPN4P29074 AC114491.1-201ENST00000416095 246 ntBASIC2.36□□□□□ -2.03
PTPN4P29074 CYCSP48-201ENST00000417124 323 ntBASIC2.36□□□□□ -2.03
PTPN4P29074 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.36□□□□□ -2.03
PTPN4P29074 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.36□□□□□ -2.03
PTPN4P29074 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.36□□□□□ -2.03
PTPN4P29074 AC079448.1-201ENST00000449377 373 ntBASIC2.36□□□□□ -2.03
PTPN4P29074 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.36□□□□□ -2.03
PTPN4P29074 KLF3P2-201ENST00000465138 268 ntBASIC2.36□□□□□ -2.03
PTPN4P29074 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
PTPN4P29074 AC104435.1-201ENST00000483483 166 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms