Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
COL5A1P20908 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC1.66□□□□□ -2.14
COL5A1P20908 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC1.66□□□□□ -2.14
COL5A1P20908 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.66□□□□□ -2.14
COL5A1P20908 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.66□□□□□ -2.14
COL5A1P20908 AC104581.2-201ENST00000572227 430 ntBASIC1.66□□□□□ -2.14
COL5A1P20908 EIF1P4-201ENST00000572664 335 ntBASIC1.66□□□□□ -2.14
COL5A1P20908 MIR4419B-201ENST00000577260 68 ntBASIC1.66□□□□□ -2.14
COL5A1P20908 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC1.66□□□□□ -2.14
COL5A1P20908 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.66□□□□□ -2.14
COL5A1P20908 AC090616.5-202ENST00000582111 297 ntBASIC1.66□□□□□ -2.14
COL5A1P20908 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.66□□□□□ -2.14
COL5A1P20908 OR4G1P-201ENST00000588632 938 ntBASIC1.66□□□□□ -2.14
COL5A1P20908 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC1.66□□□□□ -2.14
COL5A1P20908 AC091304.9-201ENST00000612091 226 ntBASIC1.66□□□□□ -2.14
COL5A1P20908 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.66□□□□□ -2.14
COL5A1P20908 MIR6734-201ENST00000621166 68 ntBASIC1.66□□□□□ -2.14
COL5A1P20908 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC1.66□□□□□ -2.14
COL5A1P20908 MTND5P33-201ENST00000571250 1450 ntBASIC1.66□□□□□ -2.14
COL5A1P20908 AC005832.2-201ENST00000538921 1430 ntBASIC1.66□□□□□ -2.14
COL5A1P20908 Y_RNA.3-201ENST00000362331 103 ntBASIC1.66□□□□□ -2.14
COL5A1P20908 RNY1-201ENST00000364228 113 ntBASIC1.66□□□□□ -2.14
COL5A1P20908 RNU6-53P-201ENST00000365367 106 ntBASIC1.66□□□□□ -2.14
COL5A1P20908 Y_RNA.402-201ENST00000383972 102 ntBASIC1.66□□□□□ -2.14
COL5A1P20908 RNU6-432P-201ENST00000384196 109 ntBASIC1.66□□□□□ -2.14
COL5A1P20908 RNU6-278P-201ENST00000390945 109 ntBASIC1.66□□□□□ -2.14
COL5A1P20908 Y_RNA.608-201ENST00000410647 95 ntBASIC1.66□□□□□ -2.14
COL5A1P20908 AC004022.2-201ENST00000413824 193 ntBASIC1.66□□□□□ -2.14
COL5A1P20908 MTATP6P4-201ENST00000427725 675 ntBASIC1.66□□□□□ -2.14
COL5A1P20908 TIMM9P3-201ENST00000428659 274 ntBASIC1.66□□□□□ -2.14
COL5A1P20908 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.66□□□□□ -2.14
COL5A1P20908 UBE2V1P8-201ENST00000437166 265 ntBASIC1.66□□□□□ -2.14
COL5A1P20908 USP9YP15-201ENST00000442391 422 ntBASIC1.66□□□□□ -2.14
COL5A1P20908 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC1.66□□□□□ -2.14
COL5A1P20908 snoU13.8-201ENST00000458890 104 ntBASIC1.66□□□□□ -2.14
COL5A1P20908 SRRM1P2-201ENST00000464531 1192 ntBASIC1.66□□□□□ -2.14
COL5A1P20908 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
COL5A1P20908 RN7SKP298-201ENST00000515950 94 ntBASIC1.66□□□□□ -2.14
COL5A1P20908 RNU6-506P-201ENST00000516553 94 ntBASIC1.66□□□□□ -2.14
COL5A1P20908 RNU6-714P-201ENST00000516963 103 ntBASIC1.66□□□□□ -2.14
COL5A1P20908 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.66□□□□□ -2.14
COL5A1P20908 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.66□□□□□ -2.14
COL5A1P20908 DEFB108A-201ENST00000530110 222 ntBASIC1.66□□□□□ -2.14
COL5A1P20908 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.66□□□□□ -2.14
COL5A1P20908 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.66□□□□□ -2.14
COL5A1P20908 GLUD1P4-201ENST00000590914 418 ntBASIC1.66□□□□□ -2.14
COL5A1P20908 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.66□□□□□ -2.14
COL5A1P20908 AC245014.2-201ENST00000603689 287 ntBASIC1.66□□□□□ -2.14
COL5A1P20908 AL022154.1-201ENST00000604698 785 ntBASIC1.66□□□□□ -2.14
COL5A1P20908 AC246785.4-201ENST00000605374 287 ntBASIC1.66□□□□□ -2.14
COL5A1P20908 AC138749.5-201ENST00000611461 208 ntBASIC1.66□□□□□ -2.14
COL5A1P20908 AC116165.2-201ENST00000616705 206 ntBASIC1.66□□□□□ -2.14
COL5A1P20908 SNHG22-203ENST00000617833 660 ntBASIC1.66□□□□□ -2.14
COL5A1P20908 U73479.1-201ENST00000618062 168 ntBASIC1.66□□□□□ -2.14
COL5A1P20908 AC009268.2-201ENST00000621925 457 ntBASIC1.66□□□□□ -2.14
COL5A1P20908 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC1.66□□□□□ -2.14
COL5A1P20908 AC103710.2-202ENST00000641454 2853 ntBASIC1.65□□□□□ -2.15
COL5A1P20908 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
COL5A1P20908 HSPE1P11-201ENST00000339579 310 ntBASIC1.65□□□□□ -2.15
COL5A1P20908 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC1.65□□□□□ -2.15
COL5A1P20908 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
COL5A1P20908 DEFB109C-201ENST00000382575 264 ntBASIC1.65□□□□□ -2.15
COL5A1P20908 DEFB109B-201ENST00000382656 264 ntBASIC1.65□□□□□ -2.15
COL5A1P20908 RNU5A-6P-201ENST00000384136 116 ntBASIC1.65□□□□□ -2.15
COL5A1P20908 RNU6-754P-201ENST00000391166 107 ntBASIC1.65□□□□□ -2.15
COL5A1P20908 RPL23AP32-201ENST00000395315 459 ntBASIC1.65□□□□□ -2.15
COL5A1P20908 RPS3AP24-201ENST00000407896 734 ntBASIC1.65□□□□□ -2.15
COL5A1P20908 RNU2-62P-201ENST00000410868 191 ntBASIC1.65□□□□□ -2.15
COL5A1P20908 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.65□□□□□ -2.15
COL5A1P20908 AC092447.6-201ENST00000414578 210 ntBASIC1.65□□□□□ -2.15
COL5A1P20908 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC1.65□□□□□ -2.15
COL5A1P20908 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.65□□□□□ -2.15
COL5A1P20908 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.65□□□□□ -2.15
COL5A1P20908 AC018630.2-202ENST00000422992 927 ntBASIC1.65□□□□□ -2.15
COL5A1P20908 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC1.65□□□□□ -2.15
COL5A1P20908 AC073614.1-201ENST00000438690 650 ntBASIC1.65□□□□□ -2.15
COL5A1P20908 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC1.65□□□□□ -2.15
COL5A1P20908 AL136380.1-201ENST00000447970 162 ntBASIC1.65□□□□□ -2.15
COL5A1P20908 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.65□□□□□ -2.15
COL5A1P20908 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC1.65□□□□□ -2.15
COL5A1P20908 AC110792.2-201ENST00000510278 224 ntBASIC1.65□□□□□ -2.15
COL5A1P20908 AC091133.4-201ENST00000511142 308 ntBASIC1.65□□□□□ -2.15
COL5A1P20908 AC123904.2-201ENST00000548059 300 ntBASIC1.65□□□□□ -2.15
COL5A1P20908 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.65□□□□□ -2.15
COL5A1P20908 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC1.65□□□□□ -2.15
COL5A1P20908 MIR5694-201ENST00000581190 76 ntBASIC1.65□□□□□ -2.15
COL5A1P20908 AC098848.2-201ENST00000588023 330 ntBASIC1.65□□□□□ -2.15
COL5A1P20908 AL031176.1-201ENST00000604554 466 ntBASIC1.65□□□□□ -2.15
COL5A1P20908 AP000860.1-201ENST00000605250 559 ntBASIC1.65□□□□□ -2.15
COL5A1P20908 AL512598.1-201ENST00000610158 273 ntBASIC1.65□□□□□ -2.15
COL5A1P20908 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.65□□□□□ -2.15
COL5A1P20908 AC008250.2-201ENST00000615261 205 ntBASIC1.65□□□□□ -2.15
COL5A1P20908 AC022709.1-201ENST00000615967 87 ntBASIC1.65□□□□□ -2.15
COL5A1P20908 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.65□□□□□ -2.15
COL5A1P20908 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC1.65□□□□□ -2.15
COL5A1P20908 AL159972.1-201ENST00000625150 448 ntBASIC1.65□□□□□ -2.15
COL5A1P20908 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
COL5A1P20908 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC1.65□□□□□ -2.15
COL5A1P20908 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
COL5A1P20908 RNU6-173P-201ENST00000364215 104 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms