Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 RNA5SP479-201ENST00000364858 117 ntBASIC3.88□□□□□ -1.79
COL6A2P12110 RNU6-217P-201ENST00000384164 104 ntBASIC3.88□□□□□ -1.79
COL6A2P12110 RNU6-72P-201ENST00000384285 79 ntBASIC3.88□□□□□ -1.79
COL6A2P12110 RNU6-505P-201ENST00000384427 107 ntBASIC3.88□□□□□ -1.79
COL6A2P12110 MIR625-201ENST00000385047 85 ntBASIC3.88□□□□□ -1.79
COL6A2P12110 MIR493-201ENST00000385254 89 ntBASIC3.88□□□□□ -1.79
COL6A2P12110 MTHFD2P2-201ENST00000407725 247 ntBASIC3.88□□□□□ -1.79
COL6A2P12110 RNA5SP31-201ENST00000411144 127 ntBASIC3.88□□□□□ -1.79
COL6A2P12110 AC073910.1-201ENST00000445047 438 ntBASIC3.88□□□□□ -1.79
COL6A2P12110 MTATP6P7-201ENST00000453315 681 ntBASIC3.88□□□□□ -1.79
COL6A2P12110 PPIAP15-201ENST00000479662 484 ntBASIC3.88□□□□□ -1.79
COL6A2P12110 RPL7P47-201ENST00000497299 556 ntBASIC3.88□□□□□ -1.79
COL6A2P12110 UBE2CP3-201ENST00000502715 450 ntBASIC3.88□□□□□ -1.79
COL6A2P12110 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.88□□□□□ -1.79
COL6A2P12110 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.88□□□□□ -1.79
COL6A2P12110 RN7SKP122-201ENST00000515923 296 ntBASIC3.88□□□□□ -1.79
COL6A2P12110 RNU6-377P-201ENST00000515965 102 ntBASIC3.88□□□□□ -1.79
COL6A2P12110 RNU6-1231P-201ENST00000517185 103 ntBASIC3.88□□□□□ -1.79
COL6A2P12110 RNU6-794P-201ENST00000517261 64 ntBASIC3.88□□□□□ -1.79
COL6A2P12110 AC144568.1-201ENST00000520139 137 ntBASIC3.88□□□□□ -1.79
COL6A2P12110 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.88□□□□□ -1.79
COL6A2P12110 AP003730.1-201ENST00000524605 285 ntBASIC3.88□□□□□ -1.79
COL6A2P12110 HMGB1P14-201ENST00000557424 591 ntBASIC3.88□□□□□ -1.79
COL6A2P12110 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.88□□□□□ -1.79
COL6A2P12110 AL590392.1-201ENST00000604960 446 ntBASIC3.88□□□□□ -1.79
COL6A2P12110 AC008962.1-201ENST00000605729 304 ntBASIC3.88□□□□□ -1.79
COL6A2P12110 FTX_3.1-201ENST00000610451 147 ntBASIC3.88□□□□□ -1.79
COL6A2P12110 SCARNA4-202ENST00000625402 129 ntBASIC3.88□□□□□ -1.79
COL6A2P12110 U2.21-201ENST00000637295 81 ntBASIC3.88□□□□□ -1.79
COL6A2P12110 MTND5P9-201ENST00000503854 1755 ntBASIC3.88□□□□□ -1.79
COL6A2P12110 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
COL6A2P12110 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.87□□□□□ -1.79
COL6A2P12110 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
COL6A2P12110 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
COL6A2P12110 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
COL6A2P12110 FTLP6-201ENST00000355274 422 ntBASIC3.87□□□□□ -1.79
COL6A2P12110 RNU6-450P-201ENST00000364654 107 ntBASIC3.87□□□□□ -1.79
COL6A2P12110 RNU5E-7P-201ENST00000365290 117 ntBASIC3.87□□□□□ -1.79
COL6A2P12110 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.87□□□□□ -1.79
COL6A2P12110 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.87□□□□□ -1.79
COL6A2P12110 AC010618.1-201ENST00000469924 477 ntBASIC3.87□□□□□ -1.79
COL6A2P12110 RPL30P10-201ENST00000488148 337 ntBASIC3.87□□□□□ -1.79
COL6A2P12110 AL132838.2-201ENST00000492041 314 ntBASIC3.87□□□□□ -1.79
COL6A2P12110 AK3P2-201ENST00000507976 429 ntBASIC3.87□□□□□ -1.79
COL6A2P12110 SLC25A15P5-201ENST00000508033 253 ntBASIC3.87□□□□□ -1.79
COL6A2P12110 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.87□□□□□ -1.79
COL6A2P12110 RNU6-612P-201ENST00000516909 102 ntBASIC3.87□□□□□ -1.79
COL6A2P12110 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.87□□□□□ -1.79
COL6A2P12110 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC3.87□□□□□ -1.79
COL6A2P12110 YPEL5P3-201ENST00000547227 352 ntBASIC3.87□□□□□ -1.79
COL6A2P12110 MIR3939-201ENST00000582614 106 ntBASIC3.87□□□□□ -1.79
COL6A2P12110 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.87□□□□□ -1.79
COL6A2P12110 VN1R91P-201ENST00000594377 169 ntBASIC3.87□□□□□ -1.79
COL6A2P12110 AL355598.1-201ENST00000604169 202 ntBASIC3.87□□□□□ -1.79
COL6A2P12110 AC092628.2-201ENST00000622492 339 ntBASIC3.87□□□□□ -1.79
COL6A2P12110 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.87□□□□□ -1.79
COL6A2P12110 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
COL6A2P12110 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.87□□□□□ -1.79
COL6A2P12110 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.87□□□□□ -1.79
COL6A2P12110 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.86□□□□□ -1.79
COL6A2P12110 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
COL6A2P12110 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
COL6A2P12110 AC090740.1-201ENST00000623193 2262 ntBASIC3.86□□□□□ -1.79
COL6A2P12110 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.86□□□□□ -1.79
COL6A2P12110 RNU6-50P-201ENST00000362356 103 ntBASIC3.86□□□□□ -1.79
COL6A2P12110 SNORD50.1-201ENST00000362987 71 ntBASIC3.86□□□□□ -1.79
COL6A2P12110 Y_RNA.276-201ENST00000364732 109 ntBASIC3.86□□□□□ -1.79
COL6A2P12110 SNORA63.7-201ENST00000365579 123 ntBASIC3.86□□□□□ -1.79
COL6A2P12110 MIR199A2-201ENST00000385289 110 ntBASIC3.86□□□□□ -1.79
COL6A2P12110 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
COL6A2P12110 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.86□□□□□ -1.79
COL6A2P12110 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.86□□□□□ -1.79
COL6A2P12110 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.86□□□□□ -1.79
COL6A2P12110 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
COL6A2P12110 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
COL6A2P12110 RPL21P11-201ENST00000461458 483 ntBASIC3.86□□□□□ -1.79
COL6A2P12110 RPS29P27-201ENST00000463711 170 ntBASIC3.86□□□□□ -1.79
COL6A2P12110 AC105137.1-201ENST00000484355 562 ntBASIC3.86□□□□□ -1.79
COL6A2P12110 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC3.86□□□□□ -1.79
COL6A2P12110 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.86□□□□□ -1.79
COL6A2P12110 AC010265.1-201ENST00000513509 211 ntBASIC3.86□□□□□ -1.79
COL6A2P12110 RNU6-911P-201ENST00000516523 104 ntBASIC3.86□□□□□ -1.79
COL6A2P12110 RN7SKP209-201ENST00000516888 304 ntBASIC3.86□□□□□ -1.79
COL6A2P12110 Y_RNA.715-201ENST00000517082 110 ntBASIC3.86□□□□□ -1.79
COL6A2P12110 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.86□□□□□ -1.79
COL6A2P12110 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.86□□□□□ -1.79
COL6A2P12110 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.86□□□□□ -1.79
COL6A2P12110 CYCSP39-201ENST00000565821 309 ntBASIC3.86□□□□□ -1.79
COL6A2P12110 AC004584.2-201ENST00000570407 410 ntBASIC3.86□□□□□ -1.79
COL6A2P12110 MIR4782-201ENST00000577987 79 ntBASIC3.86□□□□□ -1.79
COL6A2P12110 RN7SL600P-201ENST00000581811 299 ntBASIC3.86□□□□□ -1.79
COL6A2P12110 MIR3138-201ENST00000585238 82 ntBASIC3.86□□□□□ -1.79
COL6A2P12110 AC009318.2-201ENST00000610917 651 ntBASIC3.86□□□□□ -1.79
COL6A2P12110 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.86□□□□□ -1.79
COL6A2P12110 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
COL6A2P12110 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.86□□□□□ -1.79
COL6A2P12110 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
COL6A2P12110 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.86□□□□□ -1.79
COL6A2P12110 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
COL6A2P12110 AL353746.1-201ENST00000566293 6881 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 138.9 ms