Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC1.31□□□□□ -2.2
COL4A2P08572 AC098657.3-201ENST00000620434 263 ntBASIC1.31□□□□□ -2.2
COL4A2P08572 AL136313.1-201ENST00000624804 202 ntBASIC1.31□□□□□ -2.2
COL4A2P08572 MIR7157-201ENST00000635801 60 ntBASIC1.31□□□□□ -2.2
COL4A2P08572 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
COL4A2P08572 AP000560.1-201ENST00000624150 1937 ntBASIC1.31□□□□□ -2.2
COL4A2P08572 AL359851.1-201ENST00000569460 4997 ntBASIC1.31□□□□□ -2.2
COL4A2P08572 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
COL4A2P08572 MTND4P9-201ENST00000507819 1346 ntBASIC1.3□□□□□ -2.2
COL4A2P08572 SNORA4.1-201ENST00000364263 144 ntBASIC1.3□□□□□ -2.2
COL4A2P08572 RNU6-1032P-201ENST00000384100 107 ntBASIC1.3□□□□□ -2.2
COL4A2P08572 RNU6-920P-201ENST00000410926 92 ntBASIC1.3□□□□□ -2.2
COL4A2P08572 RPS12P24-201ENST00000412619 387 ntBASIC1.3□□□□□ -2.2
COL4A2P08572 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.3□□□□□ -2.2
COL4A2P08572 MTCO2P23-201ENST00000425216 680 ntBASIC1.3□□□□□ -2.2
COL4A2P08572 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC1.3□□□□□ -2.2
COL4A2P08572 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.3□□□□□ -2.2
COL4A2P08572 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC1.3□□□□□ -2.2
COL4A2P08572 AP000542.1-201ENST00000448473 371 ntBASIC1.3□□□□□ -2.2
COL4A2P08572 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC1.3□□□□□ -2.2
COL4A2P08572 RPL23AP35-201ENST00000451906 501 ntBASIC1.3□□□□□ -2.2
COL4A2P08572 MTND2P39-201ENST00000457230 764 ntBASIC1.3□□□□□ -2.2
COL4A2P08572 SNORD97-201ENST00000459187 142 ntBASIC1.3□□□□□ -2.2
COL4A2P08572 MTCYBP35-201ENST00000503630 1137 ntBASIC1.3□□□□□ -2.2
COL4A2P08572 HMGB3P3-201ENST00000510526 400 ntBASIC1.3□□□□□ -2.2
COL4A2P08572 MTCO2P15-201ENST00000532655 656 ntBASIC1.3□□□□□ -2.2
COL4A2P08572 AC068587.4-201ENST00000533893 186 ntBASIC1.3□□□□□ -2.2
COL4A2P08572 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC1.3□□□□□ -2.2
COL4A2P08572 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC1.3□□□□□ -2.2
COL4A2P08572 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC1.3□□□□□ -2.2
COL4A2P08572 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.3□□□□□ -2.2
COL4A2P08572 MIR4658-201ENST00000584344 65 ntBASIC1.3□□□□□ -2.2
COL4A2P08572 AL391813.1-201ENST00000603098 260 ntBASIC1.3□□□□□ -2.2
COL4A2P08572 AC174048.1-201ENST00000603389 144 ntBASIC1.3□□□□□ -2.2
COL4A2P08572 AC136443.5-201ENST00000603741 370 ntBASIC1.3□□□□□ -2.2
COL4A2P08572 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC1.3□□□□□ -2.2
COL4A2P08572 MIR6734-201ENST00000621166 68 ntBASIC1.3□□□□□ -2.2
COL4A2P08572 AC095038.3-201ENST00000634439 195 ntBASIC1.3□□□□□ -2.2
COL4A2P08572 MTND5P30-201ENST00000452896 1731 ntBASIC1.3□□□□□ -2.2
COL4A2P08572 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
COL4A2P08572 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.29□□□□□ -2.2
COL4A2P08572 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
COL4A2P08572 RNA5SP240-201ENST00000365355 128 ntBASIC1.29□□□□□ -2.2
COL4A2P08572 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
COL4A2P08572 RNU6-220P-201ENST00000390919 107 ntBASIC1.29□□□□□ -2.2
COL4A2P08572 U6atac.2-201ENST00000408644 118 ntBASIC1.29□□□□□ -2.2
COL4A2P08572 RNU2-49P-201ENST00000410666 184 ntBASIC1.29□□□□□ -2.2
COL4A2P08572 AC078974.1-201ENST00000411597 223 ntBASIC1.29□□□□□ -2.2
COL4A2P08572 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.29□□□□□ -2.2
COL4A2P08572 ZNF90P2-204ENST00000419323 1075 ntBASIC1.29□□□□□ -2.2
COL4A2P08572 DNAJA1P2-201ENST00000421360 1197 ntBASIC1.29□□□□□ -2.2
COL4A2P08572 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC1.29□□□□□ -2.2
COL4A2P08572 RAC1P6-201ENST00000423911 575 ntBASIC1.29□□□□□ -2.2
COL4A2P08572 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC1.29□□□□□ -2.2
COL4A2P08572 SKA2P1-201ENST00000425592 390 ntBASIC1.29□□□□□ -2.2
COL4A2P08572 TXNL1P1-201ENST00000429528 554 ntBASIC1.29□□□□□ -2.2
COL4A2P08572 AC084290.1-201ENST00000434995 374 ntBASIC1.29□□□□□ -2.2
COL4A2P08572 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.29□□□□□ -2.2
COL4A2P08572 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.29□□□□□ -2.2
COL4A2P08572 ANKRD26P4-201ENST00000455755 950 ntBASIC1.29□□□□□ -2.2
COL4A2P08572 AC108059.3-201ENST00000456388 214 ntBASIC1.29□□□□□ -2.2
COL4A2P08572 AL121769.1-201ENST00000469473 401 ntBASIC1.29□□□□□ -2.2
COL4A2P08572 RPL22P13-201ENST00000493291 347 ntBASIC1.29□□□□□ -2.2
COL4A2P08572 RPS27AP10-201ENST00000496103 208 ntBASIC1.29□□□□□ -2.2
COL4A2P08572 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.29□□□□□ -2.2
COL4A2P08572 AC023141.11-201ENST00000508864 202 ntBASIC1.29□□□□□ -2.2
COL4A2P08572 RNU6-581P-201ENST00000516214 105 ntBASIC1.29□□□□□ -2.2
COL4A2P08572 UTP23-205ENST00000520733 369 ntTSL 3 BASIC1.29□□□□□ -2.2
COL4A2P08572 AC010186.2-204ENST00000537668 439 ntBASIC1.29□□□□□ -2.2
COL4A2P08572 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.29□□□□□ -2.2
COL4A2P08572 AC011604.1-201ENST00000545978 196 ntBASIC1.29□□□□□ -2.2
COL4A2P08572 AC136618.2-201ENST00000575091 400 ntBASIC1.29□□□□□ -2.2
COL4A2P08572 MIR3167-201ENST00000579623 85 ntBASIC1.29□□□□□ -2.2
COL4A2P08572 BNIP3P23-201ENST00000599655 511 ntBASIC1.29□□□□□ -2.2
COL4A2P08572 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.29□□□□□ -2.2
COL4A2P08572 AC245884.12-201ENST00000615364 59 ntBASIC1.29□□□□□ -2.2
COL4A2P08572 HMGB1P24-202ENST00000615653 685 ntBASIC1.29□□□□□ -2.2
COL4A2P08572 AC008121.3-201ENST00000618726 433 ntBASIC1.29□□□□□ -2.2
COL4A2P08572 AC022306.3-201ENST00000619930 550 ntBASIC1.29□□□□□ -2.2
COL4A2P08572 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.29□□□□□ -2.2
COL4A2P08572 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
COL4A2P08572 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
COL4A2P08572 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.29□□□□□ -2.2
COL4A2P08572 AL359854.1-201ENST00000614203 1594 ntBASIC1.29□□□□□ -2.2
COL4A2P08572 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.29□□□□□ -2.2
COL4A2P08572 RNY4P24-201ENST00000362735 96 ntBASIC1.29□□□□□ -2.2
COL4A2P08572 RNU6-512P-201ENST00000364438 103 ntBASIC1.29□□□□□ -2.2
COL4A2P08572 RNU6-1083P-201ENST00000384022 107 ntBASIC1.29□□□□□ -2.2
COL4A2P08572 RN7SKP158-201ENST00000410453 326 ntBASIC1.29□□□□□ -2.2
COL4A2P08572 RN7SKP51-201ENST00000410781 304 ntBASIC1.29□□□□□ -2.2
COL4A2P08572 PIGPP2-201ENST00000411569 458 ntBASIC1.29□□□□□ -2.2
COL4A2P08572 VPS26BP1-201ENST00000417155 755 ntBASIC1.29□□□□□ -2.2
COL4A2P08572 AC006366.1-201ENST00000422002 759 ntBASIC1.29□□□□□ -2.2
COL4A2P08572 RPL36AP53-201ENST00000432891 316 ntBASIC1.29□□□□□ -2.2
COL4A2P08572 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.29□□□□□ -2.2
COL4A2P08572 ZNF736P1Y-201ENST00000440402 1276 ntBASIC1.29□□□□□ -2.2
COL4A2P08572 BRK1P2-201ENST00000442875 223 ntBASIC1.29□□□□□ -2.2
COL4A2P08572 HMGN2P10-201ENST00000448085 265 ntBASIC1.29□□□□□ -2.2
COL4A2P08572 ZNF736P5Y-201ENST00000451173 805 ntBASIC1.29□□□□□ -2.2
COL4A2P08572 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 139.5 ms