Protein–RNA interactions for Protein: P07197

NEFM, Neurofilament medium polypeptide, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEFMP07197 Y_RNA.350-201ENST00000365409 98 ntBASIC4.8□□□□□ -1.64
NEFMP07197 RNU6-1329P-201ENST00000365664 107 ntBASIC4.8□□□□□ -1.64
NEFMP07197 Y_RNA.461-201ENST00000384263 103 ntBASIC4.8□□□□□ -1.64
NEFMP07197 RNU6-472P-201ENST00000384299 107 ntBASIC4.8□□□□□ -1.64
NEFMP07197 Y_RNA.577-201ENST00000384794 101 ntBASIC4.8□□□□□ -1.64
NEFMP07197 MIR184-201ENST00000384962 84 ntBASIC4.8□□□□□ -1.64
NEFMP07197 MIR218-2-201ENST00000385006 110 ntBASIC4.8□□□□□ -1.64
NEFMP07197 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
NEFMP07197 RPL21P1-201ENST00000399532 476 ntBASIC4.8□□□□□ -1.64
NEFMP07197 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NEFMP07197 SETP5-201ENST00000437270 562 ntBASIC4.8□□□□□ -1.64
NEFMP07197 AC004866.2-201ENST00000438285 481 ntBASIC4.8□□□□□ -1.64
NEFMP07197 RN7SL330P-201ENST00000469709 307 ntBASIC4.8□□□□□ -1.64
NEFMP07197 RPL17P19-201ENST00000489069 552 ntBASIC4.8□□□□□ -1.64
NEFMP07197 AC093852.1-201ENST00000503587 266 ntBASIC4.8□□□□□ -1.64
NEFMP07197 AC026784.1-201ENST00000507986 352 ntBASIC4.8□□□□□ -1.64
NEFMP07197 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.8□□□□□ -1.64
NEFMP07197 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
NEFMP07197 MIR5692A1-201ENST00000580523 69 ntBASIC4.8□□□□□ -1.64
NEFMP07197 U3.45-201ENST00000607547 219 ntBASIC4.8□□□□□ -1.64
NEFMP07197 RNVU1-4-201ENST00000612985 164 ntBASIC4.8□□□□□ -1.64
NEFMP07197 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC4.8□□□□□ -1.64
NEFMP07197 5S_rRNA.12-201ENST00000617631 107 ntBASIC4.8□□□□□ -1.64
NEFMP07197 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC4.8□□□□□ -1.64
NEFMP07197 MIR4272-201ENST00000635924 64 ntBASIC4.8□□□□□ -1.64
NEFMP07197 U6.104-201ENST00000637979 90 ntBASIC4.8□□□□□ -1.64
NEFMP07197 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.8□□□□□ -1.64
NEFMP07197 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC4.8□□□□□ -1.64
NEFMP07197 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NEFMP07197 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC4.8□□□□□ -1.64
NEFMP07197 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.79□□□□□ -1.64
NEFMP07197 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
NEFMP07197 AC138393.1-203ENST00000327086 343 ntBASIC4.79□□□□□ -1.64
NEFMP07197 RNU6-1155P-201ENST00000363554 107 ntBASIC4.79□□□□□ -1.64
NEFMP07197 SNORA73.2-201ENST00000364946 201 ntBASIC4.79□□□□□ -1.64
NEFMP07197 MIR135A2-201ENST00000384854 100 ntBASIC4.79□□□□□ -1.64
NEFMP07197 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
NEFMP07197 SYF2P2-201ENST00000417620 583 ntBASIC4.79□□□□□ -1.64
NEFMP07197 AL133396.1-201ENST00000432048 687 ntBASIC4.79□□□□□ -1.64
NEFMP07197 RPL21P2-201ENST00000440049 481 ntBASIC4.79□□□□□ -1.64
NEFMP07197 DAP3P1-201ENST00000441522 278 ntBASIC4.79□□□□□ -1.64
NEFMP07197 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.79□□□□□ -1.64
NEFMP07197 PCMTD1P1-201ENST00000455560 355 ntBASIC4.79□□□□□ -1.64
NEFMP07197 RPL21P41-201ENST00000459863 264 ntBASIC4.79□□□□□ -1.64
NEFMP07197 VN1R104P-201ENST00000505115 1009 ntBASIC4.79□□□□□ -1.64
NEFMP07197 RN7SKP83-201ENST00000516512 178 ntBASIC4.79□□□□□ -1.64
NEFMP07197 RN7SKP258-201ENST00000517151 304 ntBASIC4.79□□□□□ -1.64
NEFMP07197 RN7SKP40-201ENST00000517211 242 ntBASIC4.79□□□□□ -1.64
NEFMP07197 IGHV3-76-201ENST00000522465 295 ntBASIC4.79□□□□□ -1.64
NEFMP07197 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.79□□□□□ -1.64
NEFMP07197 AC125232.2-201ENST00000592457 143 ntBASIC4.79□□□□□ -1.64
NEFMP07197 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.79□□□□□ -1.64
NEFMP07197 AC078899.3-201ENST00000599065 212 ntBASIC4.79□□□□□ -1.64
NEFMP07197 AC141273.2-201ENST00000618989 130 ntBASIC4.79□□□□□ -1.64
NEFMP07197 AP003355.3-201ENST00000623465 114 ntBASIC4.79□□□□□ -1.64
NEFMP07197 AC009093.8-201ENST00000641769 292 ntBASIC4.79□□□□□ -1.64
NEFMP07197 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
NEFMP07197 MTND5P27-201ENST00000428871 1720 ntBASIC4.79□□□□□ -1.64
NEFMP07197 AC008669.1-201ENST00000565823 2178 ntBASIC4.79□□□□□ -1.64
NEFMP07197 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
NEFMP07197 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NEFMP07197 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.78□□□□□ -1.64
NEFMP07197 CEP170P1-201ENST00000502249 4587 ntBASIC4.78□□□□□ -1.64
NEFMP07197 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
NEFMP07197 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC4.78□□□□□ -1.64
NEFMP07197 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
NEFMP07197 Y_RNA.151-201ENST00000363566 112 ntBASIC4.78□□□□□ -1.64
NEFMP07197 Y_RNA.526-201ENST00000384572 110 ntBASIC4.78□□□□□ -1.64
NEFMP07197 MIR1302-6-201ENST00000408466 90 ntBASIC4.78□□□□□ -1.64
NEFMP07197 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.78□□□□□ -1.64
NEFMP07197 AC091286.1-201ENST00000431233 461 ntBASIC4.78□□□□□ -1.64
NEFMP07197 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.78□□□□□ -1.64
NEFMP07197 RPS29P31-201ENST00000446147 164 ntBASIC4.78□□□□□ -1.64
NEFMP07197 FTH1P25-201ENST00000447665 469 ntBASIC4.78□□□□□ -1.64
NEFMP07197 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC4.78□□□□□ -1.64
NEFMP07197 RNU6-1132P-201ENST00000459214 107 ntBASIC4.78□□□□□ -1.64
NEFMP07197 AC105758.1-201ENST00000506038 399 ntBASIC4.78□□□□□ -1.64
NEFMP07197 RNU6-1095P-201ENST00000516148 108 ntBASIC4.78□□□□□ -1.64
NEFMP07197 AC040926.1-201ENST00000530195 238 ntBASIC4.78□□□□□ -1.64
NEFMP07197 OR4H12P-201ENST00000556269 907 ntBASIC4.78□□□□□ -1.64
NEFMP07197 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.78□□□□□ -1.64
NEFMP07197 KLKP1-201ENST00000595979 403 ntBASIC4.78□□□□□ -1.64
NEFMP07197 AC006077.1-201ENST00000604746 343 ntBASIC4.78□□□□□ -1.64
NEFMP07197 SDR42E1P2-201ENST00000614861 481 ntBASIC4.78□□□□□ -1.64
NEFMP07197 AL450472.3-201ENST00000615578 367 ntBASIC4.78□□□□□ -1.64
NEFMP07197 MIR6075-201ENST00000620782 95 ntBASIC4.78□□□□□ -1.64
NEFMP07197 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC4.78□□□□□ -1.64
NEFMP07197 AC112200.1-201ENST00000625015 234 ntBASIC4.78□□□□□ -1.64
NEFMP07197 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
NEFMP07197 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.65
NEFMP07197 AC032011.1-201ENST00000611703 1549 ntBASIC4.77□□□□□ -1.65
NEFMP07197 MFSD8-236ENST00000641509 4050 ntBASIC4.77□□□□□ -1.65
NEFMP07197 AC233263.6-201ENST00000631132 1963 ntBASIC4.77□□□□□ -1.65
NEFMP07197 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NEFMP07197 SNORD9-201ENST00000362566 104 ntBASIC4.77□□□□□ -1.65
NEFMP07197 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.77□□□□□ -1.65
NEFMP07197 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
NEFMP07197 RNU6-14P-201ENST00000384630 106 ntBASIC4.77□□□□□ -1.65
NEFMP07197 AL138885.1-201ENST00000405921 675 ntBASIC4.77□□□□□ -1.65
NEFMP07197 AP000567.1-201ENST00000406413 156 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 194.8 ms