Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AC021646.1-201ENST00000605469 484 ntBASIC1.29□□□□□ -2.2
HLA-DQB2P05538 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.29□□□□□ -2.2
HLA-DQB2P05538 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.29□□□□□ -2.2
HLA-DQB2P05538 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.29□□□□□ -2.2
HLA-DQB2P05538 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
HLA-DQB2P05538 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
HLA-DQB2P05538 MTCO1P17-201ENST00000411522 491 ntBASIC1.28□□□□□ -2.2
HLA-DQB2P05538 AL359704.1-201ENST00000411586 781 ntBASIC1.28□□□□□ -2.2
HLA-DQB2P05538 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.28□□□□□ -2.2
HLA-DQB2P05538 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC1.28□□□□□ -2.2
HLA-DQB2P05538 AC008267.5-201ENST00000424928 265 ntBASIC1.28□□□□□ -2.2
HLA-DQB2P05538 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC1.28□□□□□ -2.2
HLA-DQB2P05538 AL592045.1-201ENST00000429867 352 ntBASIC1.28□□□□□ -2.2
HLA-DQB2P05538 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC1.28□□□□□ -2.2
HLA-DQB2P05538 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC1.28□□□□□ -2.2
HLA-DQB2P05538 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.28□□□□□ -2.2
HLA-DQB2P05538 RPS29P23-201ENST00000458635 123 ntBASIC1.28□□□□□ -2.2
HLA-DQB2P05538 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.28□□□□□ -2.2
HLA-DQB2P05538 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC1.28□□□□□ -2.2
HLA-DQB2P05538 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.28□□□□□ -2.2
HLA-DQB2P05538 RNU6-667P-201ENST00000517186 102 ntBASIC1.28□□□□□ -2.2
HLA-DQB2P05538 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.28□□□□□ -2.2
HLA-DQB2P05538 AC087441.2-201ENST00000529141 262 ntBASIC1.28□□□□□ -2.2
HLA-DQB2P05538 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC1.28□□□□□ -2.2
HLA-DQB2P05538 IMMP1LP2-201ENST00000552954 492 ntBASIC1.28□□□□□ -2.2
HLA-DQB2P05538 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.28□□□□□ -2.2
HLA-DQB2P05538 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.28□□□□□ -2.2
HLA-DQB2P05538 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC1.28□□□□□ -2.2
HLA-DQB2P05538 AL358072.1-201ENST00000604156 575 ntBASIC1.28□□□□□ -2.2
HLA-DQB2P05538 AC112220.2-201ENST00000605513 533 ntBASIC1.28□□□□□ -2.2
HLA-DQB2P05538 AL021368.1-201ENST00000607490 540 ntBASIC1.28□□□□□ -2.2
HLA-DQB2P05538 AC090970.3-201ENST00000612566 866 ntBASIC1.28□□□□□ -2.2
HLA-DQB2P05538 AC123767.1-202ENST00000620407 817 ntBASIC1.28□□□□□ -2.2
HLA-DQB2P05538 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.27□□□□□ -2.21
HLA-DQB2P05538 AC138393.1-203ENST00000327086 343 ntBASIC1.27□□□□□ -2.21
HLA-DQB2P05538 Y_RNA.110-201ENST00000363220 99 ntBASIC1.27□□□□□ -2.21
HLA-DQB2P05538 RNU6-560P-201ENST00000364007 108 ntBASIC1.27□□□□□ -2.21
HLA-DQB2P05538 RNU1-57P-201ENST00000384491 166 ntBASIC1.27□□□□□ -2.21
HLA-DQB2P05538 RNA5SP465-201ENST00000391195 109 ntBASIC1.27□□□□□ -2.21
HLA-DQB2P05538 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.27□□□□□ -2.21
HLA-DQB2P05538 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC1.27□□□□□ -2.21
HLA-DQB2P05538 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.27□□□□□ -2.21
HLA-DQB2P05538 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC1.27□□□□□ -2.21
HLA-DQB2P05538 FCF1P6-201ENST00000456841 595 ntBASIC1.27□□□□□ -2.21
HLA-DQB2P05538 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.27□□□□□ -2.21
HLA-DQB2P05538 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.27□□□□□ -2.21
HLA-DQB2P05538 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.27□□□□□ -2.21
HLA-DQB2P05538 AC021146.8-201ENST00000507455 733 ntBASIC1.27□□□□□ -2.21
HLA-DQB2P05538 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
HLA-DQB2P05538 AC008834.1-201ENST00000511612 175 ntBASIC1.27□□□□□ -2.21
HLA-DQB2P05538 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC1.27□□□□□ -2.21
HLA-DQB2P05538 RNU6-572P-201ENST00000516724 80 ntBASIC1.27□□□□□ -2.21
HLA-DQB2P05538 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.27□□□□□ -2.21
HLA-DQB2P05538 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.27□□□□□ -2.21
HLA-DQB2P05538 AC084364.2-201ENST00000546924 395 ntBASIC1.27□□□□□ -2.21
HLA-DQB2P05538 ARL2BPP2-201ENST00000550907 489 ntBASIC1.27□□□□□ -2.21
HLA-DQB2P05538 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.27□□□□□ -2.21
HLA-DQB2P05538 AL356432.3-201ENST00000568952 465 ntBASIC1.27□□□□□ -2.21
HLA-DQB2P05538 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.27□□□□□ -2.21
HLA-DQB2P05538 AP000943.4-201ENST00000622912 357 ntBASIC1.27□□□□□ -2.21
HLA-DQB2P05538 AL136313.1-201ENST00000624804 202 ntBASIC1.27□□□□□ -2.21
HLA-DQB2P05538 AC126544.2-201ENST00000625174 749 ntBASIC1.27□□□□□ -2.21
HLA-DQB2P05538 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.27□□□□□ -2.21
HLA-DQB2P05538 AC092192.1-201ENST00000633154 1018 ntBASIC1.27□□□□□ -2.21
HLA-DQB2P05538 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
HLA-DQB2P05538 Y_RNA.311-201ENST00000365068 96 ntBASIC1.26□□□□□ -2.21
HLA-DQB2P05538 MIR29C-201ENST00000385231 88 ntBASIC1.26□□□□□ -2.21
HLA-DQB2P05538 AC009310.1-201ENST00000414414 451 ntBASIC1.26□□□□□ -2.21
HLA-DQB2P05538 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.26□□□□□ -2.21
HLA-DQB2P05538 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.26□□□□□ -2.21
HLA-DQB2P05538 RNA5SP57-201ENST00000459463 123 ntBASIC1.26□□□□□ -2.21
HLA-DQB2P05538 AC027575.1-201ENST00000481064 460 ntBASIC1.26□□□□□ -2.21
HLA-DQB2P05538 RPL39P36-201ENST00000490784 156 ntBASIC1.26□□□□□ -2.21
HLA-DQB2P05538 AC090821.2-201ENST00000523552 176 ntBASIC1.26□□□□□ -2.21
HLA-DQB2P05538 RPL30P11-203ENST00000598995 310 ntBASIC1.26□□□□□ -2.21
HLA-DQB2P05538 AC018638.7-201ENST00000605836 1114 ntBASIC1.26□□□□□ -2.21
HLA-DQB2P05538 AC245297.2-201ENST00000610119 565 ntBASIC1.26□□□□□ -2.21
HLA-DQB2P05538 uc_338.12-201ENST00000616344 181 ntBASIC1.26□□□□□ -2.21
HLA-DQB2P05538 RNU5E-1-201ENST00000362477 120 ntBASIC1.25□□□□□ -2.21
HLA-DQB2P05538 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.25□□□□□ -2.21
HLA-DQB2P05538 SNORA40C-201ENST00000391285 128 ntBASIC1.25□□□□□ -2.21
HLA-DQB2P05538 MIR934-201ENST00000401241 83 ntBASIC1.25□□□□□ -2.21
HLA-DQB2P05538 FTH1P15-201ENST00000406984 280 ntBASIC1.25□□□□□ -2.21
HLA-DQB2P05538 MIR1262-201ENST00000408276 93 ntBASIC1.25□□□□□ -2.21
HLA-DQB2P05538 RN7SKP266-201ENST00000410232 287 ntBASIC1.25□□□□□ -2.21
HLA-DQB2P05538 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC1.25□□□□□ -2.21
HLA-DQB2P05538 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1.25□□□□□ -2.21
HLA-DQB2P05538 MTND5P25-201ENST00000430499 799 ntBASIC1.25□□□□□ -2.21
HLA-DQB2P05538 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.25□□□□□ -2.21
HLA-DQB2P05538 BTF3P15-201ENST00000455606 336 ntBASIC1.25□□□□□ -2.21
HLA-DQB2P05538 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.25□□□□□ -2.21
HLA-DQB2P05538 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC1.25□□□□□ -2.21
HLA-DQB2P05538 RNA5SP458-201ENST00000516188 119 ntBASIC1.25□□□□□ -2.21
HLA-DQB2P05538 SNORA31.19-201ENST00000517079 126 ntBASIC1.25□□□□□ -2.21
HLA-DQB2P05538 RNU6-586P-201ENST00000517265 104 ntBASIC1.25□□□□□ -2.21
HLA-DQB2P05538 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.25□□□□□ -2.21
HLA-DQB2P05538 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.25□□□□□ -2.21
HLA-DQB2P05538 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.25□□□□□ -2.21
HLA-DQB2P05538 AC093249.1-201ENST00000567049 203 ntBASIC1.25□□□□□ -2.21
HLA-DQB2P05538 CLIC4P2-201ENST00000601934 717 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 169.6 ms