Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AC009318.4-201ENST00000620496 486 ntBASIC0.33□□□□□ -2.36
SPTA1P02549 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC0.33□□□□□ -2.36
SPTA1P02549 AC005832.2-201ENST00000538921 1430 ntBASIC0.32□□□□□ -2.36
SPTA1P02549 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.32□□□□□ -2.36
SPTA1P02549 RNA5SP240-201ENST00000365355 128 ntBASIC0.32□□□□□ -2.36
SPTA1P02549 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
SPTA1P02549 BPY2DP-201ENST00000422208 265 ntBASIC0.32□□□□□ -2.36
SPTA1P02549 AC010099.3-201ENST00000423896 409 ntBASIC0.32□□□□□ -2.36
SPTA1P02549 FAM204CP-201ENST00000424489 642 ntBASIC0.32□□□□□ -2.36
SPTA1P02549 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC0.32□□□□□ -2.36
SPTA1P02549 ZNF863P-201ENST00000426746 417 ntBASIC0.32□□□□□ -2.36
SPTA1P02549 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC0.32□□□□□ -2.36
SPTA1P02549 MTND4P6-201ENST00000438297 472 ntBASIC0.32□□□□□ -2.36
SPTA1P02549 AC092393.1-201ENST00000439625 742 ntBASIC0.32□□□□□ -2.36
SPTA1P02549 BUD31P2-201ENST00000449374 300 ntBASIC0.32□□□□□ -2.36
SPTA1P02549 PNPLA4P1-201ENST00000458328 305 ntBASIC0.32□□□□□ -2.36
SPTA1P02549 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC0.32□□□□□ -2.36
SPTA1P02549 AC093677.1-201ENST00000514414 678 ntBASIC0.32□□□□□ -2.36
SPTA1P02549 RNU5A-7P-201ENST00000515979 116 ntBASIC0.32□□□□□ -2.36
SPTA1P02549 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC0.32□□□□□ -2.36
SPTA1P02549 AC087897.1-201ENST00000550134 156 ntBASIC0.32□□□□□ -2.36
SPTA1P02549 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC0.32□□□□□ -2.36
SPTA1P02549 AC009268.1-201ENST00000561352 1203 ntBASIC0.32□□□□□ -2.36
SPTA1P02549 AC022254.1-201ENST00000567857 235 ntBASIC0.32□□□□□ -2.36
SPTA1P02549 MIR5190-201ENST00000581537 80 ntBASIC0.32□□□□□ -2.36
SPTA1P02549 AL713866.2-201ENST00000603579 219 ntBASIC0.32□□□□□ -2.36
SPTA1P02549 AC069294.1-201ENST00000608397 350 ntBASIC0.32□□□□□ -2.36
SPTA1P02549 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC0.32□□□□□ -2.36
SPTA1P02549 SNORD115-3-201ENST00000363100 82 ntBASIC0.32□□□□□ -2.36
SPTA1P02549 RNU6-338P-201ENST00000383888 105 ntBASIC0.32□□□□□ -2.36
SPTA1P02549 MT-TC-201ENST00000387405 66 ntBASIC0.32□□□□□ -2.36
SPTA1P02549 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.32□□□□□ -2.36
SPTA1P02549 RNA5SP56-201ENST00000410277 118 ntBASIC0.32□□□□□ -2.36
SPTA1P02549 AC096649.2-201ENST00000416186 393 ntBASIC0.32□□□□□ -2.36
SPTA1P02549 RPS25P9-201ENST00000435591 252 ntBASIC0.32□□□□□ -2.36
SPTA1P02549 FGF7P5-201ENST00000441829 291 ntBASIC0.32□□□□□ -2.36
SPTA1P02549 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC0.32□□□□□ -2.36
SPTA1P02549 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC0.32□□□□□ -2.36
SPTA1P02549 RPS20P24-201ENST00000457473 361 ntBASIC0.32□□□□□ -2.36
SPTA1P02549 AC067940.1-201ENST00000458411 300 ntBASIC0.32□□□□□ -2.36
SPTA1P02549 AC006512.1-201ENST00000468816 291 ntBASIC0.32□□□□□ -2.36
SPTA1P02549 AL133373.1-201ENST00000497098 94 ntBASIC0.32□□□□□ -2.36
SPTA1P02549 RNU7-40P-201ENST00000516397 64 ntBASIC0.32□□□□□ -2.36
SPTA1P02549 SNORD19.2-201ENST00000516978 73 ntBASIC0.32□□□□□ -2.36
SPTA1P02549 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.32□□□□□ -2.36
SPTA1P02549 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC0.32□□□□□ -2.36
SPTA1P02549 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC0.32□□□□□ -2.36
SPTA1P02549 AC006518.2-201ENST00000542513 940 ntBASIC0.32□□□□□ -2.36
SPTA1P02549 AC079791.1-201ENST00000605356 973 ntBASIC0.32□□□□□ -2.36
SPTA1P02549 AC004775.1-201ENST00000607389 753 ntBASIC0.32□□□□□ -2.36
SPTA1P02549 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC0.32□□□□□ -2.36
SPTA1P02549 RNU6-884P-201ENST00000363889 107 ntBASIC0.31□□□□□ -2.36
SPTA1P02549 MIR29C-201ENST00000385231 88 ntBASIC0.31□□□□□ -2.36
SPTA1P02549 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC0.31□□□□□ -2.36
SPTA1P02549 MTCO1P56-201ENST00000401674 224 ntBASIC0.31□□□□□ -2.36
SPTA1P02549 RPS27P16-201ENST00000425758 201 ntBASIC0.31□□□□□ -2.36
SPTA1P02549 AL035410.1-201ENST00000427409 427 ntBASIC0.31□□□□□ -2.36
SPTA1P02549 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC0.31□□□□□ -2.36
SPTA1P02549 RPL37P21-201ENST00000435890 276 ntBASIC0.31□□□□□ -2.36
SPTA1P02549 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC0.31□□□□□ -2.36
SPTA1P02549 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC0.31□□□□□ -2.36
SPTA1P02549 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC0.31□□□□□ -2.36
SPTA1P02549 RNU6-1282P-201ENST00000516735 96 ntBASIC0.31□□□□□ -2.36
SPTA1P02549 AC073544.2-201ENST00000601155 540 ntBASIC0.31□□□□□ -2.36
SPTA1P02549 CLIC4P2-201ENST00000601934 717 ntBASIC0.31□□□□□ -2.36
SPTA1P02549 HSPE1P19-201ENST00000603327 295 ntBASIC0.31□□□□□ -2.36
SPTA1P02549 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.31□□□□□ -2.36
SPTA1P02549 HSBP1P2-201ENST00000299671 229 ntBASIC0.3□□□□□ -2.36
SPTA1P02549 PDCL2P1-201ENST00000419302 352 ntBASIC0.3□□□□□ -2.36
SPTA1P02549 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC0.3□□□□□ -2.36
SPTA1P02549 UBE2V2P3-201ENST00000433562 437 ntBASIC0.3□□□□□ -2.36
SPTA1P02549 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
SPTA1P02549 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC0.3□□□□□ -2.36
SPTA1P02549 CYP3A52P-201ENST00000563326 91 ntBASIC0.3□□□□□ -2.36
SPTA1P02549 MIR4493-201ENST00000584016 73 ntBASIC0.3□□□□□ -2.36
SPTA1P02549 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC0.3□□□□□ -2.36
SPTA1P02549 AL121890.5-201ENST00000620848 304 ntBASIC0.3□□□□□ -2.36
SPTA1P02549 SNORA51.6-201ENST00000384151 125 ntBASIC0.3□□□□□ -2.36
SPTA1P02549 RNU6-611P-201ENST00000384276 104 ntBASIC0.3□□□□□ -2.36
SPTA1P02549 RNU2-43P-201ENST00000410306 190 ntBASIC0.3□□□□□ -2.36
SPTA1P02549 AC096920.1-201ENST00000423991 241 ntBASIC0.3□□□□□ -2.36
SPTA1P02549 RPL26P6-201ENST00000440913 438 ntBASIC0.3□□□□□ -2.36
SPTA1P02549 CR769776.1-201ENST00000441254 787 ntBASIC0.3□□□□□ -2.36
SPTA1P02549 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC0.3□□□□□ -2.36
SPTA1P02549 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC0.3□□□□□ -2.36
SPTA1P02549 AC087477.1-201ENST00000465747 340 ntBASIC0.3□□□□□ -2.36
SPTA1P02549 VPS26AP1-201ENST00000483197 979 ntBASIC0.3□□□□□ -2.36
SPTA1P02549 SNORD116-30-201ENST00000516468 85 ntBASIC0.3□□□□□ -2.36
SPTA1P02549 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC0.3□□□□□ -2.36
SPTA1P02549 AP001180.6-201ENST00000584918 159 ntBASIC0.3□□□□□ -2.36
SPTA1P02549 AL391597.1-201ENST00000618707 694 ntBASIC0.3□□□□□ -2.36
SPTA1P02549 AC091965.5-201ENST00000624785 342 ntBASIC0.3□□□□□ -2.36
SPTA1P02549 AL049641.1-201ENST00000441055 1948 ntBASIC0.3□□□□□ -2.36
SPTA1P02549 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
SPTA1P02549 AC068700.1-201ENST00000565862 3754 ntBASIC0.29□□□□□ -2.36
SPTA1P02549 RNU1-124P-201ENST00000363861 145 ntBASIC0.29□□□□□ -2.36
SPTA1P02549 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.29□□□□□ -2.36
SPTA1P02549 RNU6-1226P-201ENST00000384317 107 ntBASIC0.29□□□□□ -2.36
SPTA1P02549 MIR100-201ENST00000385259 80 ntBASIC0.29□□□□□ -2.36
SPTA1P02549 RPL23AP95-201ENST00000426806 265 ntBASIC0.29□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms