Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AC004853.1-201ENST00000604902 698 ntBASIC1.04□□□□□ -2.24
COL1A1P02452 AC092953.2-201ENST00000608000 699 ntBASIC1.04□□□□□ -2.24
COL1A1P02452 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.04□□□□□ -2.24
COL1A1P02452 AC099842.1-201ENST00000619919 596 ntBASIC1.04□□□□□ -2.24
COL1A1P02452 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.03□□□□□ -2.24
COL1A1P02452 SUGT1P1-201ENST00000379514 476 ntBASIC1.03□□□□□ -2.24
COL1A1P02452 U6.112-201ENST00000384129 70 ntBASIC1.03□□□□□ -2.24
COL1A1P02452 RNU6-1300P-201ENST00000391046 108 ntBASIC1.03□□□□□ -2.24
COL1A1P02452 MIR936-201ENST00000401264 98 ntBASIC1.03□□□□□ -2.24
COL1A1P02452 RNU6ATAC27P-201ENST00000408289 119 ntBASIC1.03□□□□□ -2.24
COL1A1P02452 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.03□□□□□ -2.24
COL1A1P02452 TAF13P2-201ENST00000416876 286 ntBASIC1.03□□□□□ -2.24
COL1A1P02452 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC1.03□□□□□ -2.24
COL1A1P02452 GXYLT1P1-201ENST00000446657 490 ntBASIC1.03□□□□□ -2.24
COL1A1P02452 MTCYBP11-201ENST00000447254 1109 ntBASIC1.03□□□□□ -2.24
COL1A1P02452 OFD1P3Y-201ENST00000453312 783 ntBASIC1.03□□□□□ -2.24
COL1A1P02452 AC117503.1-201ENST00000472241 394 ntBASIC1.03□□□□□ -2.24
COL1A1P02452 RNU6-1102P-201ENST00000516149 96 ntBASIC1.03□□□□□ -2.24
COL1A1P02452 AC021739.1-201ENST00000559631 174 ntBASIC1.03□□□□□ -2.24
COL1A1P02452 MTCYBP22-201ENST00000603788 447 ntBASIC1.03□□□□□ -2.24
COL1A1P02452 AL158211.4-201ENST00000606988 584 ntBASIC1.03□□□□□ -2.24
COL1A1P02452 AC239868.4-201ENST00000608318 671 ntBASIC1.03□□□□□ -2.24
COL1A1P02452 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.03□□□□□ -2.24
COL1A1P02452 AC087821.2-201ENST00000637086 450 ntBASIC1.03□□□□□ -2.24
COL1A1P02452 AC009541.1-201ENST00000438279 2662 ntBASIC1.03□□□□□ -2.25
COL1A1P02452 SNORA25B-201ENST00000365507 128 ntBASIC1.02□□□□□ -2.25
COL1A1P02452 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC1.02□□□□□ -2.25
COL1A1P02452 MIR95-201ENST00000385072 81 ntBASIC1.02□□□□□ -2.25
COL1A1P02452 MIR30A-201ENST00000385092 71 ntBASIC1.02□□□□□ -2.25
COL1A1P02452 BTF3L4P2-201ENST00000392798 346 ntBASIC1.02□□□□□ -2.25
COL1A1P02452 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.02□□□□□ -2.25
COL1A1P02452 MTCYBP38-201ENST00000417160 1123 ntBASIC1.02□□□□□ -2.25
COL1A1P02452 AC097463.2-201ENST00000421074 142 ntBASIC1.02□□□□□ -2.25
COL1A1P02452 DEFB130D-201ENST00000426866 237 ntBASIC1.02□□□□□ -2.25
COL1A1P02452 AC098934.3-201ENST00000430450 190 ntBASIC1.02□□□□□ -2.25
COL1A1P02452 RPL31P35-201ENST00000431058 377 ntBASIC1.02□□□□□ -2.25
COL1A1P02452 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.02□□□□□ -2.25
COL1A1P02452 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.02□□□□□ -2.25
COL1A1P02452 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.02□□□□□ -2.25
COL1A1P02452 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.02□□□□□ -2.25
COL1A1P02452 AC098862.1-201ENST00000504991 413 ntBASIC1.02□□□□□ -2.25
COL1A1P02452 SNORA48.9-201ENST00000516419 162 ntBASIC1.02□□□□□ -2.25
COL1A1P02452 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.02□□□□□ -2.25
COL1A1P02452 MIR3167-201ENST00000579623 85 ntBASIC1.02□□□□□ -2.25
COL1A1P02452 MIR4666A-201ENST00000580160 79 ntBASIC1.02□□□□□ -2.25
COL1A1P02452 BNIP3P23-201ENST00000599655 511 ntBASIC1.02□□□□□ -2.25
COL1A1P02452 ZNF92P2-201ENST00000600543 1059 ntBASIC1.02□□□□□ -2.25
COL1A1P02452 U1.36-201ENST00000620684 176 ntBASIC1.02□□□□□ -2.25
COL1A1P02452 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC1.02□□□□□ -2.25
COL1A1P02452 Z99571.1-201ENST00000636677 394 ntBASIC1.02□□□□□ -2.25
COL1A1P02452 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.02□□□□□ -2.25
COL1A1P02452 AC018630.2-201ENST00000534866 2403 ntBASIC1.02□□□□□ -2.25
COL1A1P02452 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
COL1A1P02452 RNU5E-1-201ENST00000362477 120 ntBASIC1.01□□□□□ -2.25
COL1A1P02452 MIR506-201ENST00000384998 124 ntBASIC1.01□□□□□ -2.25
COL1A1P02452 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC1.01□□□□□ -2.25
COL1A1P02452 UBE2V1P15-201ENST00000407776 448 ntBASIC1.01□□□□□ -2.25
COL1A1P02452 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
COL1A1P02452 MTCO2P5-201ENST00000422621 426 ntBASIC1.01□□□□□ -2.25
COL1A1P02452 AC002381.1-201ENST00000447049 280 ntBASIC1.01□□□□□ -2.25
COL1A1P02452 RPL39P6-201ENST00000448289 150 ntBASIC1.01□□□□□ -2.25
COL1A1P02452 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC1.01□□□□□ -2.25
COL1A1P02452 AL160314.1-201ENST00000490836 438 ntBASIC1.01□□□□□ -2.25
COL1A1P02452 AC018437.1-201ENST00000492214 406 ntBASIC1.01□□□□□ -2.25
COL1A1P02452 AC022861.1-201ENST00000522981 663 ntBASIC1.01□□□□□ -2.25
COL1A1P02452 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.01□□□□□ -2.25
COL1A1P02452 AL356432.3-201ENST00000568952 465 ntBASIC1.01□□□□□ -2.25
COL1A1P02452 AC090615.1-201ENST00000577519 154 ntBASIC1.01□□□□□ -2.25
COL1A1P02452 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC1.01□□□□□ -2.25
COL1A1P02452 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC1.01□□□□□ -2.25
COL1A1P02452 AC091152.3-201ENST00000604227 325 ntBASIC1.01□□□□□ -2.25
COL1A1P02452 AC018638.7-201ENST00000605836 1114 ntBASIC1.01□□□□□ -2.25
COL1A1P02452 MIR2909-201ENST00000617113 69 ntBASIC1.01□□□□□ -2.25
COL1A1P02452 Z75746.1-201ENST00000440243 2080 ntBASIC1.01□□□□□ -2.25
COL1A1P02452 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC1.01□□□□□ -2.25
COL1A1P02452 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC1□□□□□ -2.25
COL1A1P02452 RNU6-17P-201ENST00000384245 107 ntBASIC1□□□□□ -2.25
COL1A1P02452 RNU6-18P-201ENST00000384527 107 ntBASIC1□□□□□ -2.25
COL1A1P02452 RNA5SP127-201ENST00000411051 133 ntBASIC1□□□□□ -2.25
COL1A1P02452 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC1□□□□□ -2.25
COL1A1P02452 RPL30P13-201ENST00000418873 348 ntBASIC1□□□□□ -2.25
COL1A1P02452 AC244035.1-201ENST00000430042 390 ntBASIC1□□□□□ -2.25
COL1A1P02452 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC1□□□□□ -2.25
COL1A1P02452 RPL7P34-201ENST00000433316 712 ntBASIC1□□□□□ -2.25
COL1A1P02452 SNRPEP9-201ENST00000436794 238 ntBASIC1□□□□□ -2.25
COL1A1P02452 RPL36AP48-201ENST00000485521 314 ntBASIC1□□□□□ -2.25
COL1A1P02452 RNU6-751P-201ENST00000516382 101 ntBASIC1□□□□□ -2.25
COL1A1P02452 RNU6-528P-201ENST00000516926 100 ntBASIC1□□□□□ -2.25
COL1A1P02452 MIR4789-201ENST00000577469 82 ntBASIC1□□□□□ -2.25
COL1A1P02452 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC1□□□□□ -2.25
COL1A1P02452 AP001542.1-201ENST00000591314 200 ntBASIC1□□□□□ -2.25
COL1A1P02452 SNRPGP17-201ENST00000603780 214 ntBASIC1□□□□□ -2.25
COL1A1P02452 AL596245.1-201ENST00000618994 362 ntBASIC1□□□□□ -2.25
COL1A1P02452 Y_RNA.25-201ENST00000362528 102 ntBASIC0.99□□□□□ -2.25
COL1A1P02452 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC0.99□□□□□ -2.25
COL1A1P02452 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC0.99□□□□□ -2.25
COL1A1P02452 MTCYBP32-201ENST00000427945 1084 ntBASIC0.99□□□□□ -2.25
COL1A1P02452 AC092427.1-201ENST00000439177 601 ntBASIC0.99□□□□□ -2.25
COL1A1P02452 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC0.99□□□□□ -2.25
COL1A1P02452 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms