Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 RNU6-381P-201ENST00000391259 108 ntBASIC5.16□□□□□ -1.58
ALDH1A1P00352 CTSL3P-202ENST00000412179 788 ntBASIC5.16□□□□□ -1.58
ALDH1A1P00352 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC5.16□□□□□ -1.58
ALDH1A1P00352 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC5.16□□□□□ -1.58
ALDH1A1P00352 AL589765.3-201ENST00000446084 462 ntBASIC5.16□□□□□ -1.58
ALDH1A1P00352 PRSS3P4-201ENST00000453323 162 ntBASIC5.16□□□□□ -1.58
ALDH1A1P00352 RNU6-589P-201ENST00000516485 107 ntBASIC5.16□□□□□ -1.58
ALDH1A1P00352 TVP23BP1-201ENST00000557500 617 ntBASIC5.16□□□□□ -1.58
ALDH1A1P00352 MIR5695-201ENST00000579717 85 ntBASIC5.16□□□□□ -1.58
ALDH1A1P00352 MIR3145-201ENST00000580727 82 ntBASIC5.16□□□□□ -1.58
ALDH1A1P00352 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.16□□□□□ -1.58
ALDH1A1P00352 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
ALDH1A1P00352 CPHL1P-201ENST00000461341 3407 ntBASIC5.16□□□□□ -1.58
ALDH1A1P00352 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.16□□□□□ -1.58
ALDH1A1P00352 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
ALDH1A1P00352 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.16□□□□□ -1.58
ALDH1A1P00352 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
ALDH1A1P00352 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
ALDH1A1P00352 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
ALDH1A1P00352 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
ALDH1A1P00352 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
ALDH1A1P00352 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.15□□□□□ -1.58
ALDH1A1P00352 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
ALDH1A1P00352 AC005332.5-201ENST00000591222 2919 ntBASIC5.15□□□□□ -1.58
ALDH1A1P00352 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
ALDH1A1P00352 FAM91A3P-201ENST00000456826 2544 ntBASIC5.15□□□□□ -1.58
ALDH1A1P00352 RNA5SP89-201ENST00000410300 108 ntBASIC5.15□□□□□ -1.59
ALDH1A1P00352 AC100767.1-201ENST00000528178 123 ntBASIC5.15□□□□□ -1.59
ALDH1A1P00352 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC5.15□□□□□ -1.59
ALDH1A1P00352 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC5.15□□□□□ -1.59
ALDH1A1P00352 RN7SL600P-201ENST00000581811 299 ntBASIC5.15□□□□□ -1.59
ALDH1A1P00352 AC079587.1-201ENST00000603846 277 ntBASIC5.15□□□□□ -1.59
ALDH1A1P00352 AC011603.4-201ENST00000611325 277 ntBASIC5.15□□□□□ -1.59
ALDH1A1P00352 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.15□□□□□ -1.59
ALDH1A1P00352 MTND5P32-201ENST00000560711 1802 ntBASIC5.15□□□□□ -1.59
ALDH1A1P00352 AC009812.4-201ENST00000569134 1805 ntBASIC5.15□□□□□ -1.59
ALDH1A1P00352 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.15□□□□□ -1.59
ALDH1A1P00352 AC107027.3-201ENST00000565095 3473 ntBASIC5.15□□□□□ -1.59
ALDH1A1P00352 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
ALDH1A1P00352 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC5.15□□□□□ -1.59
ALDH1A1P00352 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.15□□□□□ -1.59
ALDH1A1P00352 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
ALDH1A1P00352 HLFP1-201ENST00000402375 499 ntBASIC5.14□□□□□ -1.59
ALDH1A1P00352 EIF4EBP2P3-201ENST00000403144 334 ntBASIC5.14□□□□□ -1.59
ALDH1A1P00352 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC5.14□□□□□ -1.59
ALDH1A1P00352 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.14□□□□□ -1.59
ALDH1A1P00352 RPS20P10-201ENST00000451209 253 ntBASIC5.14□□□□□ -1.59
ALDH1A1P00352 FABP5P15-201ENST00000453566 214 ntBASIC5.14□□□□□ -1.59
ALDH1A1P00352 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC5.14□□□□□ -1.59
ALDH1A1P00352 RNA5SP230-201ENST00000517039 122 ntBASIC5.14□□□□□ -1.59
ALDH1A1P00352 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.14□□□□□ -1.59
ALDH1A1P00352 AC006349.1-201ENST00000555526 235 ntBASIC5.14□□□□□ -1.59
ALDH1A1P00352 UBL5P4-201ENST00000562584 236 ntBASIC5.14□□□□□ -1.59
ALDH1A1P00352 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC5.14□□□□□ -1.59
ALDH1A1P00352 AC048347.1-201ENST00000624621 427 ntBASIC5.14□□□□□ -1.59
ALDH1A1P00352 AL596275.2-206ENST00000641957 626 ntBASIC5.14□□□□□ -1.59
ALDH1A1P00352 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
ALDH1A1P00352 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
ALDH1A1P00352 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
ALDH1A1P00352 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
ALDH1A1P00352 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
ALDH1A1P00352 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
ALDH1A1P00352 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
ALDH1A1P00352 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.13□□□□□ -1.59
ALDH1A1P00352 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
ALDH1A1P00352 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.13□□□□□ -1.59
ALDH1A1P00352 AL353743.1-202ENST00000431724 1695 ntBASIC5.13□□□□□ -1.59
ALDH1A1P00352 SNORA63.1-201ENST00000362493 131 ntBASIC5.13□□□□□ -1.59
ALDH1A1P00352 RNU6-1249P-201ENST00000363237 111 ntBASIC5.13□□□□□ -1.59
ALDH1A1P00352 SNORA22-201ENST00000383907 134 ntBASIC5.13□□□□□ -1.59
ALDH1A1P00352 RNU6-541P-201ENST00000384709 110 ntBASIC5.13□□□□□ -1.59
ALDH1A1P00352 MIR34A-201ENST00000385130 110 ntBASIC5.13□□□□□ -1.59
ALDH1A1P00352 RNU6-578P-201ENST00000390980 103 ntBASIC5.13□□□□□ -1.59
ALDH1A1P00352 SNORA11.2-201ENST00000408318 127 ntBASIC5.13□□□□□ -1.59
ALDH1A1P00352 RPS12P23-201ENST00000419579 400 ntBASIC5.13□□□□□ -1.59
ALDH1A1P00352 AL133547.1-201ENST00000448546 220 ntBASIC5.13□□□□□ -1.59
ALDH1A1P00352 RNU7-107P-201ENST00000459121 61 ntBASIC5.13□□□□□ -1.59
ALDH1A1P00352 RN7SKP179-201ENST00000516126 217 ntBASIC5.13□□□□□ -1.59
ALDH1A1P00352 FTH1P11-201ENST00000517577 551 ntBASIC5.13□□□□□ -1.59
ALDH1A1P00352 AC090281.1-201ENST00000523019 276 ntBASIC5.13□□□□□ -1.59
ALDH1A1P00352 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
ALDH1A1P00352 MIR4744-201ENST00000581563 82 ntBASIC5.13□□□□□ -1.59
ALDH1A1P00352 AC099669.2-201ENST00000616549 437 ntBASIC5.13□□□□□ -1.59
ALDH1A1P00352 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.13□□□□□ -1.59
ALDH1A1P00352 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
ALDH1A1P00352 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
ALDH1A1P00352 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
ALDH1A1P00352 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
ALDH1A1P00352 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
ALDH1A1P00352 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC5.12□□□□□ -1.59
ALDH1A1P00352 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
ALDH1A1P00352 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
ALDH1A1P00352 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
ALDH1A1P00352 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.12□□□□□ -1.59
ALDH1A1P00352 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.12□□□□□ -1.59
ALDH1A1P00352 AL672167.1-205ENST00000641112 3080 ntBASIC5.12□□□□□ -1.59
ALDH1A1P00352 RNU6-78P-201ENST00000362897 107 ntBASIC5.12□□□□□ -1.59
ALDH1A1P00352 RNU6-199P-201ENST00000362954 107 ntBASIC5.12□□□□□ -1.59
ALDH1A1P00352 Y_RNA.525-201ENST00000384570 113 ntBASIC5.12□□□□□ -1.59
ALDH1A1P00352 MIR7-3-201ENST00000384898 110 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms