Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 Y_RNA.452-201ENST00000384202 108 ntBASIC0.01□□□□□ -2.41
USH2AO75445 MIR325-201ENST00000385260 98 ntBASIC0.01□□□□□ -2.41
USH2AO75445 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.01□□□□□ -2.41
USH2AO75445 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC0.01□□□□□ -2.41
USH2AO75445 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.01□□□□□ -2.41
USH2AO75445 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC0.01□□□□□ -2.41
USH2AO75445 AP001025.1-201ENST00000486139 332 ntBASIC0.01□□□□□ -2.41
USH2AO75445 TRBVA-201ENST00000498804 316 ntBASIC0.01□□□□□ -2.41
USH2AO75445 AC112518.2-201ENST00000508565 425 ntBASIC0.01□□□□□ -2.41
USH2AO75445 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC0.01□□□□□ -2.41
USH2AO75445 AC040926.1-201ENST00000530195 238 ntBASIC0.01□□□□□ -2.41
USH2AO75445 AC136619.2-201ENST00000563361 631 ntBASIC0.01□□□□□ -2.41
USH2AO75445 MIR4324-201ENST00000584846 72 ntBASIC0.01□□□□□ -2.41
USH2AO75445 AC105224.1-201ENST00000587055 421 ntBASIC0.01□□□□□ -2.41
USH2AO75445 RNU4-5P-201ENST00000607255 135 ntBASIC0.01□□□□□ -2.41
USH2AO75445 AP000238.1-201ENST00000608759 426 ntBASIC0.01□□□□□ -2.41
USH2AO75445 MIR6516-201ENST00000630554 81 ntBASIC0.01□□□□□ -2.41
USH2AO75445 FARSBP1-201ENST00000435808 1778 ntBASIC0.01□□□□□ -2.41
USH2AO75445 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.01□□□□□ -2.41
USH2AO75445 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC0.01□□□□□ -2.41
USH2AO75445 RNU6-968P-201ENST00000384076 107 ntBASIC0.01□□□□□ -2.41
USH2AO75445 SNORA12.1-201ENST00000390873 148 ntBASIC0.01□□□□□ -2.41
USH2AO75445 AC010469.2-201ENST00000496412 480 ntBASIC0.01□□□□□ -2.41
USH2AO75445 HMGB1P29-201ENST00000505659 499 ntBASIC0.01□□□□□ -2.41
USH2AO75445 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC0.01□□□□□ -2.41
USH2AO75445 AC087897.1-201ENST00000550134 156 ntBASIC0.01□□□□□ -2.41
USH2AO75445 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC0.01□□□□□ -2.41
USH2AO75445 ZNF92P3-201ENST00000596594 954 ntBASIC0.01□□□□□ -2.41
USH2AO75445 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC0.01□□□□□ -2.41
USH2AO75445 SNORD114-16-201ENST00000363044 70 ntBASIC0□□□□□ -2.41
USH2AO75445 Y_RNA.256-201ENST00000364594 104 ntBASIC0□□□□□ -2.41
USH2AO75445 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0□□□□□ -2.41
USH2AO75445 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0□□□□□ -2.41
USH2AO75445 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0□□□□□ -2.41
USH2AO75445 SETP11-201ENST00000473027 690 ntBASIC0□□□□□ -2.41
USH2AO75445 SYPL1P1-201ENST00000473622 768 ntBASIC0□□□□□ -2.41
USH2AO75445 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC0□□□□□ -2.41
USH2AO75445 MIR3678-201ENST00000578455 94 ntBASIC0□□□□□ -2.41
USH2AO75445 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC0□□□□□ -2.41
USH2AO75445 U1.36-201ENST00000620684 176 ntBASIC0□□□□□ -2.41
USH2AO75445 RNU6-193P-201ENST00000410977 107 ntBASIC0□□□□□ -2.41
USH2AO75445 TRAPPC2P4-201ENST00000421750 331 ntBASIC0□□□□□ -2.41
USH2AO75445 AC092634.2-201ENST00000428146 1010 ntBASIC0□□□□□ -2.41
USH2AO75445 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC0□□□□□ -2.41
USH2AO75445 RNA5SP468-201ENST00000516782 93 ntBASIC0□□□□□ -2.41
USH2AO75445 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC0□□□□□ -2.41
USH2AO75445 MIR4290-201ENST00000583807 95 ntBASIC0□□□□□ -2.41
USH2AO75445 AL590229.1-201ENST00000603497 542 ntBASIC0□□□□□ -2.41
USH2AO75445 AC100812.1-201ENST00000607622 580 ntBASIC0□□□□□ -2.41
USH2AO75445 AC097065.2-201ENST00000608159 533 ntBASIC0□□□□□ -2.41
USH2AO75445 RNU6-338P-201ENST00000383888 105 ntBASIC0□□□□□ -2.41
USH2AO75445 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC0□□□□□ -2.41
USH2AO75445 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC0□□□□□ -2.41
USH2AO75445 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC0□□□□□ -2.41
USH2AO75445 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0□□□□□ -2.41
USH2AO75445 SCARNA16.2-201ENST00000516520 172 ntBASIC0□□□□□ -2.41
USH2AO75445 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC0□□□□□ -2.41
USH2AO75445 OR10V3P-201ENST00000525712 725 ntBASIC0□□□□□ -2.41
USH2AO75445 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0□□□□□ -2.41
USH2AO75445 EIF1P4-201ENST00000572664 335 ntBASIC0□□□□□ -2.41
USH2AO75445 MIR5571-201ENST00000577998 113 ntBASIC0□□□□□ -2.41
USH2AO75445 MIR4713-201ENST00000582691 75 ntBASIC0□□□□□ -2.41
USH2AO75445 DUXAP10-204ENST00000612052 616 ntBASIC0□□□□□ -2.41
USH2AO75445 uc_338.17-201ENST00000619633 179 ntBASIC0□□□□□ -2.41
USH2AO75445 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC-0□□□□□ -2.41
USH2AO75445 Y_RNA.437-201ENST00000384113 113 ntBASIC-0□□□□□ -2.41
USH2AO75445 uc_338.34-201ENST00000617467 174 ntBASIC-0□□□□□ -2.41
USH2AO75445 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC-0□□□□□ -2.41
USH2AO75445 AC096920.1-201ENST00000423991 241 ntBASIC-0□□□□□ -2.41
USH2AO75445 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC-0□□□□□ -2.41
USH2AO75445 AP001893.2-201ENST00000526949 202 ntBASIC-0□□□□□ -2.41
USH2AO75445 AC008147.4-201ENST00000617570 1204 ntBASIC-0□□□□□ -2.41
USH2AO75445 uc_338.36-201ENST00000622331 158 ntBASIC-0□□□□□ -2.41
USH2AO75445 AC068880.5-201ENST00000624331 290 ntBASIC-0□□□□□ -2.41
USH2AO75445 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC-0.01□□□□□ -2.41
USH2AO75445 Y_RNA.190-201ENST00000363964 101 ntBASIC-0.01□□□□□ -2.41
USH2AO75445 RNU6-1327P-201ENST00000365302 105 ntBASIC-0.01□□□□□ -2.41
USH2AO75445 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC-0.01□□□□□ -2.41
USH2AO75445 BET1P1-201ENST00000482276 359 ntBASIC-0.01□□□□□ -2.41
USH2AO75445 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC-0.01□□□□□ -2.41
USH2AO75445 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC-0.01□□□□□ -2.41
USH2AO75445 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.01□□□□□ -2.41
USH2AO75445 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC-0.01□□□□□ -2.41
USH2AO75445 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC-0.01□□□□□ -2.41
USH2AO75445 RNU1-119P-201ENST00000391122 165 ntBASIC-0.01□□□□□ -2.41
USH2AO75445 RN7SKP158-201ENST00000410453 326 ntBASIC-0.01□□□□□ -2.41
USH2AO75445 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC-0.01□□□□□ -2.41
USH2AO75445 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC-0.01□□□□□ -2.41
USH2AO75445 MTCO2P12-201ENST00000427426 682 ntBASIC-0.01□□□□□ -2.41
USH2AO75445 AL353898.1-201ENST00000444055 238 ntBASIC-0.01□□□□□ -2.41
USH2AO75445 RNU7-26P-201ENST00000458980 63 ntBASIC-0.01□□□□□ -2.41
USH2AO75445 LARP1BP2-201ENST00000486594 519 ntBASIC-0.01□□□□□ -2.41
USH2AO75445 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC-0.01□□□□□ -2.41
USH2AO75445 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC-0.01□□□□□ -2.41
USH2AO75445 AC092474.3-201ENST00000603022 568 ntBASIC-0.01□□□□□ -2.41
USH2AO75445 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC-0.01□□□□□ -2.41
USH2AO75445 SNORA1.3-201ENST00000384676 136 ntBASIC-0.01□□□□□ -2.41
USH2AO75445 MIR518A1-201ENST00000385068 85 ntBASIC-0.01□□□□□ -2.41
USH2AO75445 AL513475.1-201ENST00000406602 315 ntBASIC-0.01□□□□□ -2.41
USH2AO75445 AC099677.1-201ENST00000420575 175 ntBASIC-0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 121.4 ms