Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 ZNF72P-201ENST00000425869 1908 ntBASIC4.55□□□□□ -1.68
PRPF40AO75400 Y_RNA.126-201ENST00000363382 111 ntBASIC4.55□□□□□ -1.68
PRPF40AO75400 RNY3P11-201ENST00000364153 102 ntBASIC4.55□□□□□ -1.68
PRPF40AO75400 RN7SKP280-201ENST00000364196 304 ntBASIC4.55□□□□□ -1.68
PRPF40AO75400 RNA5SP479-201ENST00000364858 117 ntBASIC4.55□□□□□ -1.68
PRPF40AO75400 Y_RNA.380-201ENST00000365663 111 ntBASIC4.55□□□□□ -1.68
PRPF40AO75400 BTF3L4P2-201ENST00000392798 346 ntBASIC4.55□□□□□ -1.68
PRPF40AO75400 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC4.55□□□□□ -1.68
PRPF40AO75400 U8.20-201ENST00000459445 131 ntBASIC4.55□□□□□ -1.68
PRPF40AO75400 TRBV12-2-201ENST00000489763 344 ntBASIC4.55□□□□□ -1.68
PRPF40AO75400 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PRPF40AO75400 FTH1P9-201ENST00000513251 355 ntBASIC4.55□□□□□ -1.68
PRPF40AO75400 RN7SKP21-201ENST00000516503 220 ntBASIC4.55□□□□□ -1.68
PRPF40AO75400 SNORA40.14-201ENST00000516543 86 ntBASIC4.55□□□□□ -1.68
PRPF40AO75400 SNORA43.2-201ENST00000516652 128 ntBASIC4.55□□□□□ -1.68
PRPF40AO75400 RNU6-928P-201ENST00000516876 104 ntBASIC4.55□□□□□ -1.68
PRPF40AO75400 AL161670.1-201ENST00000554348 137 ntBASIC4.55□□□□□ -1.68
PRPF40AO75400 AC090877.1-201ENST00000561418 344 ntBASIC4.55□□□□□ -1.68
PRPF40AO75400 7SK.7-201ENST00000603504 247 ntBASIC4.55□□□□□ -1.68
PRPF40AO75400 Z98751.3-201ENST00000604447 521 ntBASIC4.55□□□□□ -1.68
PRPF40AO75400 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC4.55□□□□□ -1.68
PRPF40AO75400 AC009318.2-201ENST00000610917 651 ntBASIC4.55□□□□□ -1.68
PRPF40AO75400 U4.1-201ENST00000620349 87 ntBASIC4.55□□□□□ -1.68
PRPF40AO75400 AC073308.1-201ENST00000623696 305 ntBASIC4.55□□□□□ -1.68
PRPF40AO75400 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC4.55□□□□□ -1.68
PRPF40AO75400 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PRPF40AO75400 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC4.55□□□□□ -1.68
PRPF40AO75400 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PRPF40AO75400 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PRPF40AO75400 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PRPF40AO75400 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PRPF40AO75400 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
PRPF40AO75400 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
PRPF40AO75400 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.54□□□□□ -1.68
PRPF40AO75400 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.54□□□□□ -1.68
PRPF40AO75400 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PRPF40AO75400 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
PRPF40AO75400 RNU6-238P-201ENST00000363313 106 ntBASIC4.54□□□□□ -1.68
PRPF40AO75400 Y_RNA.123-201ENST00000363338 102 ntBASIC4.54□□□□□ -1.68
PRPF40AO75400 RNU6-105P-201ENST00000363909 104 ntBASIC4.54□□□□□ -1.68
PRPF40AO75400 Y_RNA.574-201ENST00000384766 95 ntBASIC4.54□□□□□ -1.68
PRPF40AO75400 MIR628-201ENST00000385229 95 ntBASIC4.54□□□□□ -1.68
PRPF40AO75400 RPL21P17-201ENST00000397467 475 ntBASIC4.54□□□□□ -1.68
PRPF40AO75400 HLFP1-201ENST00000402375 499 ntBASIC4.54□□□□□ -1.68
PRPF40AO75400 HSPE1P26-201ENST00000405341 275 ntBASIC4.54□□□□□ -1.68
PRPF40AO75400 RN7SKP53-201ENST00000411337 315 ntBASIC4.54□□□□□ -1.68
PRPF40AO75400 HSPE1P12-201ENST00000412576 301 ntBASIC4.54□□□□□ -1.68
PRPF40AO75400 NDUFS5P4-201ENST00000412983 318 ntBASIC4.54□□□□□ -1.68
PRPF40AO75400 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC4.54□□□□□ -1.68
PRPF40AO75400 AL591043.1-201ENST00000432461 424 ntBASIC4.54□□□□□ -1.68
PRPF40AO75400 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC4.54□□□□□ -1.68
PRPF40AO75400 OR2AQ1P-201ENST00000451972 200 ntBASIC4.54□□□□□ -1.68
PRPF40AO75400 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.54□□□□□ -1.68
PRPF40AO75400 MRPS35P2-201ENST00000508242 191 ntBASIC4.54□□□□□ -1.68
PRPF40AO75400 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.54□□□□□ -1.68
PRPF40AO75400 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC4.54□□□□□ -1.68
PRPF40AO75400 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.54□□□□□ -1.68
PRPF40AO75400 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.54□□□□□ -1.68
PRPF40AO75400 MIR5188-201ENST00000583467 113 ntBASIC4.54□□□□□ -1.68
PRPF40AO75400 AC020895.1-201ENST00000595362 272 ntBASIC4.54□□□□□ -1.68
PRPF40AO75400 AC024153.1-201ENST00000603103 365 ntBASIC4.54□□□□□ -1.68
PRPF40AO75400 AL355297.3-201ENST00000604082 446 ntBASIC4.54□□□□□ -1.68
PRPF40AO75400 AC012468.1-201ENST00000604888 430 ntBASIC4.54□□□□□ -1.68
PRPF40AO75400 AC110741.2-201ENST00000605278 268 ntBASIC4.54□□□□□ -1.68
PRPF40AO75400 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC4.54□□□□□ -1.68
PRPF40AO75400 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
PRPF40AO75400 AC007792.1-201ENST00000623023 402 ntBASIC4.54□□□□□ -1.68
PRPF40AO75400 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
PRPF40AO75400 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.53□□□□□ -1.68
PRPF40AO75400 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
PRPF40AO75400 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC4.53□□□□□ -1.68
PRPF40AO75400 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
PRPF40AO75400 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PRPF40AO75400 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
PRPF40AO75400 SNORD50.1-201ENST00000362987 71 ntBASIC4.53□□□□□ -1.68
PRPF40AO75400 RNA5SP399-201ENST00000364003 117 ntBASIC4.53□□□□□ -1.68
PRPF40AO75400 MIR1193-201ENST00000408109 78 ntBASIC4.53□□□□□ -1.68
PRPF40AO75400 RNU2-37P-201ENST00000410695 177 ntBASIC4.53□□□□□ -1.68
PRPF40AO75400 RNU6-1245P-201ENST00000411130 106 ntBASIC4.53□□□□□ -1.68
PRPF40AO75400 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC4.53□□□□□ -1.68
PRPF40AO75400 AC083863.1-201ENST00000438811 231 ntBASIC4.53□□□□□ -1.68
PRPF40AO75400 AC098831.1-201ENST00000440661 216 ntBASIC4.53□□□□□ -1.68
PRPF40AO75400 RPL26P9-201ENST00000457466 433 ntBASIC4.53□□□□□ -1.68
PRPF40AO75400 RPS29P27-201ENST00000463711 170 ntBASIC4.53□□□□□ -1.68
PRPF40AO75400 AC010265.1-201ENST00000513509 211 ntBASIC4.53□□□□□ -1.68
PRPF40AO75400 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.53□□□□□ -1.68
PRPF40AO75400 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC4.53□□□□□ -1.68
PRPF40AO75400 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC4.53□□□□□ -1.68
PRPF40AO75400 MIR5701-3-201ENST00000578890 82 ntBASIC4.53□□□□□ -1.68
PRPF40AO75400 MIR5701-1-201ENST00000585138 82 ntBASIC4.53□□□□□ -1.68
PRPF40AO75400 VN1R91P-201ENST00000594377 169 ntBASIC4.53□□□□□ -1.68
PRPF40AO75400 VN1R107P-201ENST00000601784 209 ntBASIC4.53□□□□□ -1.68
PRPF40AO75400 MIR5701-2-201ENST00000615634 82 ntBASIC4.53□□□□□ -1.68
PRPF40AO75400 ZYXP1-201ENST00000617638 118 ntBASIC4.53□□□□□ -1.68
PRPF40AO75400 AF117829.1-206ENST00000621883 3802 ntBASIC4.53□□□□□ -1.68
PRPF40AO75400 AC066616.2-201ENST00000559334 1481 ntBASIC4.53□□□□□ -1.68
PRPF40AO75400 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.53□□□□□ -1.68
PRPF40AO75400 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC4.52□□□□□ -1.69
PRPF40AO75400 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.52□□□□□ -1.69
PRPF40AO75400 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms