Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.93□□□□□ -1.78
TRIM13O60858 AC120057.2-201ENST00000571520 271 ntBASIC3.93□□□□□ -1.78
TRIM13O60858 AC123912.5-201ENST00000605470 343 ntBASIC3.93□□□□□ -1.78
TRIM13O60858 AC011921.3-201ENST00000605540 361 ntBASIC3.93□□□□□ -1.78
TRIM13O60858 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.93□□□□□ -1.78
TRIM13O60858 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.93□□□□□ -1.78
TRIM13O60858 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
TRIM13O60858 AC008725.1-201ENST00000605123 2263 ntBASIC3.93□□□□□ -1.78
TRIM13O60858 AL365440.1-201ENST00000436135 2167 ntBASIC3.93□□□□□ -1.78
TRIM13O60858 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
TRIM13O60858 BX322639.1-202ENST00000423987 2213 ntBASIC3.93□□□□□ -1.78
TRIM13O60858 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
TRIM13O60858 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
TRIM13O60858 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
TRIM13O60858 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC3.92□□□□□ -1.78
TRIM13O60858 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
TRIM13O60858 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
TRIM13O60858 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
TRIM13O60858 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
TRIM13O60858 SNORD50.1-201ENST00000362987 71 ntBASIC3.92□□□□□ -1.78
TRIM13O60858 RNA5SP447-201ENST00000363749 119 ntBASIC3.92□□□□□ -1.78
TRIM13O60858 RNA5SP505-201ENST00000364748 108 ntBASIC3.92□□□□□ -1.78
TRIM13O60858 Y_RNA.324-201ENST00000365165 102 ntBASIC3.92□□□□□ -1.78
TRIM13O60858 RNU6-417P-201ENST00000384712 107 ntBASIC3.92□□□□□ -1.78
TRIM13O60858 RNU6-1168P-201ENST00000390831 104 ntBASIC3.92□□□□□ -1.78
TRIM13O60858 MTCYBP2-201ENST00000407745 171 ntBASIC3.92□□□□□ -1.78
TRIM13O60858 RNU6-1135P-201ENST00000411083 103 ntBASIC3.92□□□□□ -1.78
TRIM13O60858 Y_RNA.629-201ENST00000411368 105 ntBASIC3.92□□□□□ -1.78
TRIM13O60858 AC016769.2-201ENST00000414815 475 ntBASIC3.92□□□□□ -1.78
TRIM13O60858 EI24P1-201ENST00000416584 867 ntBASIC3.92□□□□□ -1.78
TRIM13O60858 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
TRIM13O60858 ATP6V0E1P2-201ENST00000441771 245 ntBASIC3.92□□□□□ -1.78
TRIM13O60858 HSPE1P25-201ENST00000455484 251 ntBASIC3.92□□□□□ -1.78
TRIM13O60858 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
TRIM13O60858 RNU6-1037P-201ENST00000459571 107 ntBASIC3.92□□□□□ -1.78
TRIM13O60858 AC146944.2-203ENST00000502493 354 ntBASIC3.92□□□□□ -1.78
TRIM13O60858 AC020593.1-201ENST00000507399 299 ntBASIC3.92□□□□□ -1.78
TRIM13O60858 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.92□□□□□ -1.78
TRIM13O60858 AC139495.1-202ENST00000513164 354 ntBASIC3.92□□□□□ -1.78
TRIM13O60858 MIR2114-201ENST00000516645 80 ntBASIC3.92□□□□□ -1.78
TRIM13O60858 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.92□□□□□ -1.78
TRIM13O60858 AP006245.1-201ENST00000522549 120 ntBASIC3.92□□□□□ -1.78
TRIM13O60858 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.92□□□□□ -1.78
TRIM13O60858 OR4H12P-201ENST00000556269 907 ntBASIC3.92□□□□□ -1.78
TRIM13O60858 BNIP3P5-201ENST00000562290 498 ntBASIC3.92□□□□□ -1.78
TRIM13O60858 MIR4715-201ENST00000584117 79 ntBASIC3.92□□□□□ -1.78
TRIM13O60858 AC108706.1-201ENST00000611053 297 ntBASIC3.92□□□□□ -1.78
TRIM13O60858 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.92□□□□□ -1.78
TRIM13O60858 AC097372.5-201ENST00000623665 376 ntBASIC3.92□□□□□ -1.78
TRIM13O60858 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.91□□□□□ -1.78
TRIM13O60858 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC3.91□□□□□ -1.78
TRIM13O60858 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
TRIM13O60858 RPL9P7-201ENST00000330965 580 ntBASIC3.91□□□□□ -1.78
TRIM13O60858 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
TRIM13O60858 Y_RNA.358-201ENST00000365491 99 ntBASIC3.91□□□□□ -1.78
TRIM13O60858 RNU6-937P-201ENST00000384325 106 ntBASIC3.91□□□□□ -1.78
TRIM13O60858 MIR521-1-201ENST00000384902 87 ntBASIC3.91□□□□□ -1.78
TRIM13O60858 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
TRIM13O60858 RNU6-918P-201ENST00000391219 106 ntBASIC3.91□□□□□ -1.78
TRIM13O60858 MIR190B-201ENST00000401119 79 ntBASIC3.91□□□□□ -1.78
TRIM13O60858 AL353621.1-201ENST00000418219 243 ntBASIC3.91□□□□□ -1.78
TRIM13O60858 CYP4F29P-201ENST00000420685 446 ntBASIC3.91□□□□□ -1.78
TRIM13O60858 AL591043.1-201ENST00000432461 424 ntBASIC3.91□□□□□ -1.78
TRIM13O60858 AL513043.1-201ENST00000439124 535 ntBASIC3.91□□□□□ -1.78
TRIM13O60858 PIGFP3-201ENST00000441918 722 ntBASIC3.91□□□□□ -1.78
TRIM13O60858 RPS11P1-201ENST00000451072 473 ntBASIC3.91□□□□□ -1.78
TRIM13O60858 RPL9P9-202ENST00000466501 579 ntBASIC3.91□□□□□ -1.78
TRIM13O60858 RN7SL604P-201ENST00000492589 296 ntBASIC3.91□□□□□ -1.78
TRIM13O60858 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.91□□□□□ -1.78
TRIM13O60858 RNU6-914P-201ENST00000516749 109 ntBASIC3.91□□□□□ -1.78
TRIM13O60858 RN7SKP258-201ENST00000517151 304 ntBASIC3.91□□□□□ -1.78
TRIM13O60858 AC025755.1-201ENST00000521306 278 ntBASIC3.91□□□□□ -1.78
TRIM13O60858 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC3.91□□□□□ -1.78
TRIM13O60858 SNRPGP16-201ENST00000533275 226 ntBASIC3.91□□□□□ -1.78
TRIM13O60858 MIR548AC-201ENST00000585049 88 ntBASIC3.91□□□□□ -1.78
TRIM13O60858 BDH2P1-201ENST00000602288 736 ntBASIC3.91□□□□□ -1.78
TRIM13O60858 AL162424.1-201ENST00000602325 221 ntBASIC3.91□□□□□ -1.78
TRIM13O60858 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.91□□□□□ -1.78
TRIM13O60858 AL353748.2-201ENST00000622148 471 ntBASIC3.91□□□□□ -1.78
TRIM13O60858 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.91□□□□□ -1.78
TRIM13O60858 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
TRIM13O60858 AP001486.2-201ENST00000561652 5113 ntBASIC3.91□□□□□ -1.78
TRIM13O60858 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
TRIM13O60858 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC3.9□□□□□ -1.78
TRIM13O60858 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
TRIM13O60858 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC3.9□□□□□ -1.78
TRIM13O60858 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.9□□□□□ -1.78
TRIM13O60858 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.78
TRIM13O60858 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
TRIM13O60858 RNU4-90P-201ENST00000362773 141 ntBASIC3.9□□□□□ -1.79
TRIM13O60858 RNA5SP366-201ENST00000365454 123 ntBASIC3.9□□□□□ -1.79
TRIM13O60858 RNU6-1074P-201ENST00000383995 104 ntBASIC3.9□□□□□ -1.79
TRIM13O60858 Y_RNA.504-201ENST00000384481 104 ntBASIC3.9□□□□□ -1.79
TRIM13O60858 AL133270.1-201ENST00000402635 279 ntBASIC3.9□□□□□ -1.79
TRIM13O60858 AL033519.2-201ENST00000403958 392 ntBASIC3.9□□□□□ -1.79
TRIM13O60858 ELOCP19-201ENST00000411919 318 ntBASIC3.9□□□□□ -1.79
TRIM13O60858 RPL26P6-201ENST00000440913 438 ntBASIC3.9□□□□□ -1.79
TRIM13O60858 snoU13.1-201ENST00000459157 104 ntBASIC3.9□□□□□ -1.79
TRIM13O60858 SNORD108-201ENST00000459332 71 ntBASIC3.9□□□□□ -1.79
TRIM13O60858 RNU6-840P-201ENST00000517275 65 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms