Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.74□□□□□ -1.97
PRKNO60260 AC093019.1-201ENST00000443135 252 ntBASIC2.74□□□□□ -1.97
PRKNO60260 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.74□□□□□ -1.97
PRKNO60260 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.74□□□□□ -1.97
PRKNO60260 RPL12P25-201ENST00000455592 494 ntBASIC2.74□□□□□ -1.97
PRKNO60260 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.74□□□□□ -1.97
PRKNO60260 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.74□□□□□ -1.97
PRKNO60260 SCGB1D5P-201ENST00000515134 247 ntBASIC2.74□□□□□ -1.97
PRKNO60260 RNU6-1282P-201ENST00000516735 96 ntBASIC2.74□□□□□ -1.97
PRKNO60260 RNU6-273P-201ENST00000516937 96 ntBASIC2.74□□□□□ -1.97
PRKNO60260 RNA5SP380-201ENST00000517190 98 ntBASIC2.74□□□□□ -1.97
PRKNO60260 RN7SKP256-201ENST00000517201 314 ntBASIC2.74□□□□□ -1.97
PRKNO60260 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.74□□□□□ -1.97
PRKNO60260 AL137843.1-201ENST00000605078 385 ntBASIC2.74□□□□□ -1.97
PRKNO60260 AC021646.1-201ENST00000605469 484 ntBASIC2.74□□□□□ -1.97
PRKNO60260 AC093732.2-201ENST00000607950 274 ntBASIC2.74□□□□□ -1.97
PRKNO60260 AL121757.2-201ENST00000611223 313 ntBASIC2.74□□□□□ -1.97
PRKNO60260 AC103705.1-201ENST00000619013 241 ntBASIC2.74□□□□□ -1.97
PRKNO60260 AC104985.2-201ENST00000620598 500 ntBASIC2.74□□□□□ -1.97
PRKNO60260 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.74□□□□□ -1.97
PRKNO60260 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.74□□□□□ -1.97
PRKNO60260 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
PRKNO60260 SNORD3E-201ENST00000362899 217 ntBASIC2.73□□□□□ -1.97
PRKNO60260 Y_RNA.414-201ENST00000384011 101 ntBASIC2.73□□□□□ -1.97
PRKNO60260 SNORA18.3-201ENST00000384122 132 ntBASIC2.73□□□□□ -1.97
PRKNO60260 RNU2-68P-201ENST00000410878 191 ntBASIC2.73□□□□□ -1.97
PRKNO60260 MTND3P8-201ENST00000412909 339 ntBASIC2.73□□□□□ -1.97
PRKNO60260 RPLP0P7-201ENST00000416050 667 ntBASIC2.73□□□□□ -1.97
PRKNO60260 USP9YP20-201ENST00000419224 558 ntBASIC2.73□□□□□ -1.97
PRKNO60260 RPL21P40-201ENST00000428586 483 ntBASIC2.73□□□□□ -1.97
PRKNO60260 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.73□□□□□ -1.97
PRKNO60260 SNRPEP9-201ENST00000436794 238 ntBASIC2.73□□□□□ -1.97
PRKNO60260 RPL23AP22-201ENST00000437556 453 ntBASIC2.73□□□□□ -1.97
PRKNO60260 MRPL50P4-201ENST00000446432 475 ntBASIC2.73□□□□□ -1.97
PRKNO60260 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.73□□□□□ -1.97
PRKNO60260 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC2.73□□□□□ -1.97
PRKNO60260 MTND1P11-201ENST00000456661 876 ntBASIC2.73□□□□□ -1.97
PRKNO60260 PPP1R2P5-201ENST00000457256 603 ntBASIC2.73□□□□□ -1.97
PRKNO60260 SNORA59A-201ENST00000459326 152 ntBASIC2.73□□□□□ -1.97
PRKNO60260 RNU7-66P-201ENST00000459469 62 ntBASIC2.73□□□□□ -1.97
PRKNO60260 RN7SL75P-201ENST00000461926 281 ntBASIC2.73□□□□□ -1.97
PRKNO60260 SNORA19.2-201ENST00000516013 114 ntBASIC2.73□□□□□ -1.97
PRKNO60260 AC090136.1-201ENST00000520009 240 ntBASIC2.73□□□□□ -1.97
PRKNO60260 AC025755.1-201ENST00000521306 278 ntBASIC2.73□□□□□ -1.97
PRKNO60260 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.73□□□□□ -1.97
PRKNO60260 MTCO3P23-201ENST00000561363 289 ntBASIC2.73□□□□□ -1.97
PRKNO60260 AC026464.5-201ENST00000562497 722 ntBASIC2.73□□□□□ -1.97
PRKNO60260 CYCSP39-201ENST00000565821 309 ntBASIC2.73□□□□□ -1.97
PRKNO60260 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.73□□□□□ -1.97
PRKNO60260 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.73□□□□□ -1.97
PRKNO60260 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC2.73□□□□□ -1.97
PRKNO60260 AC005498.1-201ENST00000592125 465 ntBASIC2.73□□□□□ -1.97
PRKNO60260 AC002044.1-201ENST00000606707 158 ntBASIC2.73□□□□□ -1.97
PRKNO60260 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
PRKNO60260 AL359314.1-201ENST00000616913 261 ntBASIC2.73□□□□□ -1.97
PRKNO60260 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.73□□□□□ -1.97
PRKNO60260 AC099654.5-201ENST00000636479 350 ntBASIC2.73□□□□□ -1.97
PRKNO60260 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
PRKNO60260 CUL1P1-201ENST00000509510 2425 ntBASIC2.73□□□□□ -1.97
PRKNO60260 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
PRKNO60260 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
PRKNO60260 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.73□□□□□ -1.97
PRKNO60260 AC121333.1-201ENST00000567488 2709 ntBASIC2.72□□□□□ -1.97
PRKNO60260 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.72□□□□□ -1.97
PRKNO60260 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
PRKNO60260 Y_RNA.111-201ENST00000363248 100 ntBASIC2.72□□□□□ -1.97
PRKNO60260 Y_RNA.356-201ENST00000365475 113 ntBASIC2.72□□□□□ -1.97
PRKNO60260 RNU6-217P-201ENST00000384164 104 ntBASIC2.72□□□□□ -1.97
PRKNO60260 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
PRKNO60260 EIF4E2P1-201ENST00000393781 255 ntBASIC2.72□□□□□ -1.97
PRKNO60260 RPS4XP3-201ENST00000398541 413 ntBASIC2.72□□□□□ -1.97
PRKNO60260 AL122016.1-201ENST00000403365 367 ntBASIC2.72□□□□□ -1.97
PRKNO60260 AL356432.1-201ENST00000405809 419 ntBASIC2.72□□□□□ -1.97
PRKNO60260 RN7SKP32-201ENST00000410167 303 ntBASIC2.72□□□□□ -1.97
PRKNO60260 HSPE1P1-201ENST00000421494 318 ntBASIC2.72□□□□□ -1.97
PRKNO60260 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.72□□□□□ -1.97
PRKNO60260 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
PRKNO60260 AL365400.1-201ENST00000431854 640 ntBASIC2.72□□□□□ -1.97
PRKNO60260 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.72□□□□□ -1.97
PRKNO60260 AC025750.2-201ENST00000442609 450 ntBASIC2.72□□□□□ -1.97
PRKNO60260 RNU6-329P-201ENST00000459618 107 ntBASIC2.72□□□□□ -1.97
PRKNO60260 AP001486.1-201ENST00000463339 476 ntBASIC2.72□□□□□ -1.97
PRKNO60260 AC087884.1-201ENST00000469738 328 ntBASIC2.72□□□□□ -1.97
PRKNO60260 RN7SL633P-201ENST00000488974 297 ntBASIC2.72□□□□□ -1.97
PRKNO60260 AC103851.1-201ENST00000506833 274 ntBASIC2.72□□□□□ -1.97
PRKNO60260 AC006445.2-201ENST00000510061 472 ntBASIC2.72□□□□□ -1.97
PRKNO60260 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.72□□□□□ -1.97
PRKNO60260 AC008716.1-201ENST00000511084 513 ntBASIC2.72□□□□□ -1.97
PRKNO60260 SNORA14.1-201ENST00000516113 141 ntBASIC2.72□□□□□ -1.97
PRKNO60260 RNU6-928P-201ENST00000516876 104 ntBASIC2.72□□□□□ -1.97
PRKNO60260 RNU6-711P-201ENST00000517255 106 ntBASIC2.72□□□□□ -1.97
PRKNO60260 AC009902.1-201ENST00000519351 183 ntBASIC2.72□□□□□ -1.97
PRKNO60260 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.72□□□□□ -1.97
PRKNO60260 AC068657.1-201ENST00000520807 306 ntBASIC2.72□□□□□ -1.97
PRKNO60260 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.72□□□□□ -1.97
PRKNO60260 RAB11AP2-201ENST00000545905 639 ntBASIC2.72□□□□□ -1.97
PRKNO60260 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC2.72□□□□□ -1.97
PRKNO60260 AC005668.1-201ENST00000571142 476 ntBASIC2.72□□□□□ -1.97
PRKNO60260 FGF7P1-201ENST00000582820 288 ntBASIC2.72□□□□□ -1.97
PRKNO60260 MIR3942-201ENST00000585264 109 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms