Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.05□□□□□ -1.92
LDB2O43679 MIR634-201ENST00000385208 97 ntBASIC3.05□□□□□ -1.92
LDB2O43679 AL591034.1-201ENST00000407447 340 ntBASIC3.05□□□□□ -1.92
LDB2O43679 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.05□□□□□ -1.92
LDB2O43679 YPEL5P1-201ENST00000419731 367 ntBASIC3.05□□□□□ -1.92
LDB2O43679 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.05□□□□□ -1.92
LDB2O43679 UQCRHP3-201ENST00000451503 251 ntBASIC3.05□□□□□ -1.92
LDB2O43679 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.05□□□□□ -1.92
LDB2O43679 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.05□□□□□ -1.92
LDB2O43679 RN7SL75P-201ENST00000461926 281 ntBASIC3.05□□□□□ -1.92
LDB2O43679 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.05□□□□□ -1.92
LDB2O43679 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.05□□□□□ -1.92
LDB2O43679 RNU6-256P-201ENST00000516747 97 ntBASIC3.05□□□□□ -1.92
LDB2O43679 IGHV3-76-201ENST00000522465 295 ntBASIC3.05□□□□□ -1.92
LDB2O43679 AC093027.1-201ENST00000546698 429 ntBASIC3.05□□□□□ -1.92
LDB2O43679 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC3.05□□□□□ -1.92
LDB2O43679 AL355375.2-201ENST00000574825 175 ntBASIC3.05□□□□□ -1.92
LDB2O43679 MIR4325-201ENST00000583049 90 ntBASIC3.05□□□□□ -1.92
LDB2O43679 AL110115.1-201ENST00000614396 364 ntBASIC3.05□□□□□ -1.92
LDB2O43679 uc_338.15-201ENST00000615470 191 ntBASIC3.05□□□□□ -1.92
LDB2O43679 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.05□□□□□ -1.92
LDB2O43679 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.05□□□□□ -1.92
LDB2O43679 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.05□□□□□ -1.92
LDB2O43679 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.05□□□□□ -1.92
LDB2O43679 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.05□□□□□ -1.92
LDB2O43679 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
LDB2O43679 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.05□□□□□ -1.92
LDB2O43679 AC093831.2-201ENST00000624393 3427 ntBASIC3.05□□□□□ -1.92
LDB2O43679 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
LDB2O43679 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.04□□□□□ -1.92
LDB2O43679 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.04□□□□□ -1.92
LDB2O43679 AL049641.1-201ENST00000441055 1948 ntBASIC3.04□□□□□ -1.92
LDB2O43679 MIR422A-201ENST00000362286 90 ntBASIC3.04□□□□□ -1.92
LDB2O43679 RNU4-76P-201ENST00000364509 141 ntBASIC3.04□□□□□ -1.92
LDB2O43679 Y_RNA.474-201ENST00000384341 102 ntBASIC3.04□□□□□ -1.92
LDB2O43679 RN7SKP220-201ENST00000410611 288 ntBASIC3.04□□□□□ -1.92
LDB2O43679 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.04□□□□□ -1.92
LDB2O43679 HIGD1AP11-201ENST00000438361 280 ntBASIC3.04□□□□□ -1.92
LDB2O43679 RPL7P43-201ENST00000478876 753 ntBASIC3.04□□□□□ -1.92
LDB2O43679 AC022493.1-201ENST00000492984 337 ntBASIC3.04□□□□□ -1.92
LDB2O43679 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC3.04□□□□□ -1.92
LDB2O43679 RNU6-1088P-201ENST00000516850 104 ntBASIC3.04□□□□□ -1.92
LDB2O43679 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.04□□□□□ -1.92
LDB2O43679 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.04□□□□□ -1.92
LDB2O43679 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.04□□□□□ -1.92
LDB2O43679 LRRC37A5P-203ENST00000580181 585 ntBASIC3.04□□□□□ -1.92
LDB2O43679 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.04□□□□□ -1.92
LDB2O43679 MIR3672-201ENST00000584290 82 ntBASIC3.04□□□□□ -1.92
LDB2O43679 MIR5692C1-201ENST00000585309 91 ntBASIC3.04□□□□□ -1.92
LDB2O43679 AC023043.2-201ENST00000589678 1026 ntBASIC3.04□□□□□ -1.92
LDB2O43679 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.04□□□□□ -1.92
LDB2O43679 AC136601.2-201ENST00000604356 474 ntBASIC3.04□□□□□ -1.92
LDB2O43679 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.04□□□□□ -1.92
LDB2O43679 AC135507.2-201ENST00000612443 309 ntBASIC3.04□□□□□ -1.92
LDB2O43679 FAM157A-202ENST00000615155 405 ntBASIC3.04□□□□□ -1.92
LDB2O43679 AC007318.2-201ENST00000620999 243 ntBASIC3.04□□□□□ -1.92
LDB2O43679 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
LDB2O43679 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.04□□□□□ -1.92
LDB2O43679 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
LDB2O43679 AC118273.1-201ENST00000525324 3006 ntBASIC3.03□□□□□ -1.92
LDB2O43679 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.03□□□□□ -1.92
LDB2O43679 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
LDB2O43679 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
LDB2O43679 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
LDB2O43679 MIR22-201ENST00000362190 85 ntBASIC3.03□□□□□ -1.92
LDB2O43679 RNU4-79P-201ENST00000362764 141 ntBASIC3.03□□□□□ -1.92
LDB2O43679 RNU6-266P-201ENST00000364225 107 ntBASIC3.03□□□□□ -1.92
LDB2O43679 RNU6-1303P-201ENST00000364841 107 ntBASIC3.03□□□□□ -1.92
LDB2O43679 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
LDB2O43679 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
LDB2O43679 RNU6-1179P-201ENST00000384667 107 ntBASIC3.03□□□□□ -1.92
LDB2O43679 MIR450B-201ENST00000401182 78 ntBASIC3.03□□□□□ -1.92
LDB2O43679 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
LDB2O43679 RNA5SP274-201ENST00000410484 108 ntBASIC3.03□□□□□ -1.92
LDB2O43679 RNU6-1025P-201ENST00000410629 104 ntBASIC3.03□□□□□ -1.92
LDB2O43679 RNU6-607P-201ENST00000411283 108 ntBASIC3.03□□□□□ -1.92
LDB2O43679 RPS20P15-201ENST00000412792 311 ntBASIC3.03□□□□□ -1.92
LDB2O43679 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.03□□□□□ -1.92
LDB2O43679 VN1R36P-201ENST00000414936 291 ntBASIC3.03□□□□□ -1.92
LDB2O43679 AL353621.1-201ENST00000418219 243 ntBASIC3.03□□□□□ -1.92
LDB2O43679 AC092047.1-201ENST00000424997 240 ntBASIC3.03□□□□□ -1.92
LDB2O43679 AL512844.2-201ENST00000433990 593 ntBASIC3.03□□□□□ -1.92
LDB2O43679 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.03□□□□□ -1.92
LDB2O43679 CECR9-201ENST00000453421 199 ntBASIC3.03□□□□□ -1.92
LDB2O43679 AC117503.1-201ENST00000472241 394 ntBASIC3.03□□□□□ -1.92
LDB2O43679 HMGB1P30-201ENST00000492455 606 ntBASIC3.03□□□□□ -1.92
LDB2O43679 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.03□□□□□ -1.92
LDB2O43679 MTND3P25-201ENST00000509243 135 ntBASIC3.03□□□□□ -1.92
LDB2O43679 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.03□□□□□ -1.92
LDB2O43679 AC008885.1-201ENST00000514930 301 ntBASIC3.03□□□□□ -1.92
LDB2O43679 RN7SKP43-201ENST00000516173 320 ntBASIC3.03□□□□□ -1.92
LDB2O43679 RNU6-273P-201ENST00000516937 96 ntBASIC3.03□□□□□ -1.92
LDB2O43679 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.03□□□□□ -1.92
LDB2O43679 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.03□□□□□ -1.92
LDB2O43679 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.03□□□□□ -1.92
LDB2O43679 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC3.03□□□□□ -1.92
LDB2O43679 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.03□□□□□ -1.92
LDB2O43679 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.03□□□□□ -1.92
LDB2O43679 AL451007.1-201ENST00000595491 289 ntBASIC3.03□□□□□ -1.92
LDB2O43679 AC002044.1-201ENST00000606707 158 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms