Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 SNORD116-12-201ENST00000384468 92 ntBASIC1.44□□□□□ -2.18
SGCEO43556 MIR186-201ENST00000384988 86 ntBASIC1.44□□□□□ -2.18
SGCEO43556 SNORA26.9-201ENST00000391322 122 ntBASIC1.44□□□□□ -2.18
SGCEO43556 AL627390.1-201ENST00000396055 340 ntBASIC1.44□□□□□ -2.18
SGCEO43556 AC119751.3-201ENST00000399720 670 ntBASIC1.44□□□□□ -2.18
SGCEO43556 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC1.44□□□□□ -2.18
SGCEO43556 RNU6-955P-201ENST00000410497 104 ntBASIC1.44□□□□□ -2.18
SGCEO43556 BX510359.4-201ENST00000423750 193 ntBASIC1.44□□□□□ -2.18
SGCEO43556 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.44□□□□□ -2.18
SGCEO43556 SNORD97-201ENST00000459187 142 ntBASIC1.44□□□□□ -2.18
SGCEO43556 MED28P2-201ENST00000475771 317 ntBASIC1.44□□□□□ -2.18
SGCEO43556 FAM206BP-201ENST00000510179 541 ntBASIC1.44□□□□□ -2.18
SGCEO43556 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC1.44□□□□□ -2.18
SGCEO43556 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.44□□□□□ -2.18
SGCEO43556 SNORA25.15-201ENST00000516487 89 ntBASIC1.44□□□□□ -2.18
SGCEO43556 RNU6-1315P-201ENST00000517187 99 ntBASIC1.44□□□□□ -2.18
SGCEO43556 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
SGCEO43556 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.44□□□□□ -2.18
SGCEO43556 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1.44□□□□□ -2.18
SGCEO43556 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.44□□□□□ -2.18
SGCEO43556 CYP2C61P-201ENST00000604072 290 ntBASIC1.44□□□□□ -2.18
SGCEO43556 AL365204.3-201ENST00000612448 685 ntBASIC1.44□□□□□ -2.18
SGCEO43556 AL121895.2-201ENST00000619558 447 ntBASIC1.44□□□□□ -2.18
SGCEO43556 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.44□□□□□ -2.18
SGCEO43556 ZNF876P-202ENST00000398732 1485 ntBASIC1.43□□□□□ -2.18
SGCEO43556 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
SGCEO43556 RNU6-487P-201ENST00000365430 104 ntBASIC1.43□□□□□ -2.18
SGCEO43556 Y_RNA.472-201ENST00000384322 102 ntBASIC1.43□□□□□ -2.18
SGCEO43556 SNORD14D-201ENST00000384390 87 ntBASIC1.43□□□□□ -2.18
SGCEO43556 RNU2-48P-201ENST00000410694 191 ntBASIC1.43□□□□□ -2.18
SGCEO43556 RN7SKP101-201ENST00000411376 320 ntBASIC1.43□□□□□ -2.18
SGCEO43556 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC1.43□□□□□ -2.18
SGCEO43556 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC1.43□□□□□ -2.18
SGCEO43556 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.43□□□□□ -2.18
SGCEO43556 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.43□□□□□ -2.18
SGCEO43556 MTCO2P20-201ENST00000437339 673 ntBASIC1.43□□□□□ -2.18
SGCEO43556 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.43□□□□□ -2.18
SGCEO43556 PRELID3BP1-201ENST00000457142 540 ntBASIC1.43□□□□□ -2.18
SGCEO43556 PTP4A1P4-201ENST00000512479 322 ntBASIC1.43□□□□□ -2.18
SGCEO43556 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.43□□□□□ -2.18
SGCEO43556 AL158827.2-201ENST00000602494 330 ntBASIC1.43□□□□□ -2.18
SGCEO43556 AL606834.3-201ENST00000602615 496 ntBASIC1.43□□□□□ -2.18
SGCEO43556 AC116312.1-201ENST00000606841 314 ntBASIC1.43□□□□□ -2.18
SGCEO43556 AL022345.1-201ENST00000607292 135 ntBASIC1.43□□□□□ -2.18
SGCEO43556 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.43□□□□□ -2.18
SGCEO43556 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.43□□□□□ -2.18
SGCEO43556 AL691447.3-201ENST00000635020 330 ntBASIC1.43□□□□□ -2.18
SGCEO43556 MTND5P42-201ENST00000637720 498 ntBASIC1.43□□□□□ -2.18
SGCEO43556 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
SGCEO43556 RBBP8P1-201ENST00000449447 1844 ntBASIC1.43□□□□□ -2.18
SGCEO43556 HAUS6P2-201ENST00000433254 2404 ntBASIC1.42□□□□□ -2.18
SGCEO43556 RNU6-843P-201ENST00000384454 104 ntBASIC1.42□□□□□ -2.18
SGCEO43556 Y_RNA.534-201ENST00000384599 112 ntBASIC1.42□□□□□ -2.18
SGCEO43556 MIR504-201ENST00000385065 83 ntBASIC1.42□□□□□ -2.18
SGCEO43556 MIR30A-201ENST00000385092 71 ntBASIC1.42□□□□□ -2.18
SGCEO43556 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
SGCEO43556 CISD1P1-201ENST00000393907 327 ntBASIC1.42□□□□□ -2.18
SGCEO43556 MIR1262-201ENST00000408276 93 ntBASIC1.42□□□□□ -2.18
SGCEO43556 MIR1289-2-201ENST00000408360 111 ntBASIC1.42□□□□□ -2.18
SGCEO43556 MIR1261-201ENST00000408659 82 ntBASIC1.42□□□□□ -2.18
SGCEO43556 RNU6-1025P-201ENST00000410629 104 ntBASIC1.42□□□□□ -2.18
SGCEO43556 SRIP3-201ENST00000413200 219 ntBASIC1.42□□□□□ -2.18
SGCEO43556 VPS26BP1-201ENST00000417155 755 ntBASIC1.42□□□□□ -2.18
SGCEO43556 AC009518.2-201ENST00000418056 731 ntBASIC1.42□□□□□ -2.18
SGCEO43556 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.42□□□□□ -2.18
SGCEO43556 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC1.42□□□□□ -2.18
SGCEO43556 AC010095.1-201ENST00000443543 144 ntBASIC1.42□□□□□ -2.18
SGCEO43556 AC007677.1-201ENST00000445757 515 ntBASIC1.42□□□□□ -2.18
SGCEO43556 MTND1P3-201ENST00000484956 952 ntBASIC1.42□□□□□ -2.18
SGCEO43556 AHI1-208ENST00000488690 712 ntTSL 5 BASIC1.42□□□□□ -2.18
SGCEO43556 AC021146.8-201ENST00000507455 733 ntBASIC1.42□□□□□ -2.18
SGCEO43556 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.42□□□□□ -2.18
SGCEO43556 AC116353.3-201ENST00000511215 249 ntBASIC1.42□□□□□ -2.18
SGCEO43556 AC117532.1-201ENST00000514638 323 ntBASIC1.42□□□□□ -2.18
SGCEO43556 AC010376.1-201ENST00000522101 334 ntBASIC1.42□□□□□ -2.18
SGCEO43556 AL354943.1-201ENST00000572103 781 ntBASIC1.42□□□□□ -2.18
SGCEO43556 MIR1273C-201ENST00000578669 77 ntBASIC1.42□□□□□ -2.18
SGCEO43556 MIR4255-201ENST00000579351 72 ntBASIC1.42□□□□□ -2.18
SGCEO43556 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.42□□□□□ -2.18
SGCEO43556 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.42□□□□□ -2.18
SGCEO43556 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.42□□□□□ -2.18
SGCEO43556 PART1_2.1-201ENST00000612397 250 ntBASIC1.42□□□□□ -2.18
SGCEO43556 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC1.42□□□□□ -2.18
SGCEO43556 AC090517.3-201ENST00000625170 141 ntBASIC1.42□□□□□ -2.18
SGCEO43556 MTND4P23-201ENST00000447723 1363 ntBASIC1.42□□□□□ -2.18
SGCEO43556 AC006026.1-201ENST00000444025 1803 ntBASIC1.41□□□□□ -2.18
SGCEO43556 RNU1-58P-201ENST00000362413 163 ntBASIC1.41□□□□□ -2.18
SGCEO43556 Y_RNA.33-201ENST00000362591 102 ntBASIC1.41□□□□□ -2.18
SGCEO43556 ERHP2-201ENST00000402323 299 ntBASIC1.41□□□□□ -2.18
SGCEO43556 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.41□□□□□ -2.18
SGCEO43556 AL591212.2-201ENST00000433923 257 ntBASIC1.41□□□□□ -2.18
SGCEO43556 AP000949.1-201ENST00000438328 629 ntBASIC1.41□□□□□ -2.18
SGCEO43556 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC1.41□□□□□ -2.18
SGCEO43556 AL357134.1-201ENST00000445848 426 ntBASIC1.41□□□□□ -2.18
SGCEO43556 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.41□□□□□ -2.18
SGCEO43556 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.41□□□□□ -2.18
SGCEO43556 AC112492.4-201ENST00000456549 352 ntBASIC1.41□□□□□ -2.18
SGCEO43556 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.41□□□□□ -2.18
SGCEO43556 YWHAEP4-201ENST00000505390 198 ntBASIC1.41□□□□□ -2.18
SGCEO43556 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms