Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC2.17□□□□□ -2.06
MSH4O15457 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC2.17□□□□□ -2.06
MSH4O15457 LRRC34P1-201ENST00000542742 915 ntBASIC2.17□□□□□ -2.06
MSH4O15457 AC110588.1-201ENST00000559699 137 ntBASIC2.17□□□□□ -2.06
MSH4O15457 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.17□□□□□ -2.06
MSH4O15457 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.17□□□□□ -2.06
MSH4O15457 AC012065.4-201ENST00000602445 679 ntBASIC2.17□□□□□ -2.06
MSH4O15457 AL158032.1-201ENST00000605401 106 ntBASIC2.17□□□□□ -2.06
MSH4O15457 AC069294.1-201ENST00000608397 350 ntBASIC2.17□□□□□ -2.06
MSH4O15457 AC012360.2-201ENST00000609349 391 ntBASIC2.17□□□□□ -2.06
MSH4O15457 AC063944.3-201ENST00000609969 533 ntBASIC2.17□□□□□ -2.06
MSH4O15457 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.17□□□□□ -2.06
MSH4O15457 AC091304.6-201ENST00000619761 202 ntBASIC2.17□□□□□ -2.06
MSH4O15457 AC025048.6-202ENST00000627667 438 ntBASIC2.17□□□□□ -2.06
MSH4O15457 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.17□□□□□ -2.06
MSH4O15457 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
MSH4O15457 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.16□□□□□ -2.06
MSH4O15457 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.16□□□□□ -2.06
MSH4O15457 MTND4P4-201ENST00000439033 1366 ntBASIC2.16□□□□□ -2.06
MSH4O15457 AL356292.1-201ENST00000283110 373 ntBASIC2.16□□□□□ -2.06
MSH4O15457 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
MSH4O15457 RNU6-486P-201ENST00000363116 107 ntBASIC2.16□□□□□ -2.06
MSH4O15457 SNORA38-201ENST00000363946 132 ntBASIC2.16□□□□□ -2.06
MSH4O15457 RNA5SP37-201ENST00000365420 130 ntBASIC2.16□□□□□ -2.06
MSH4O15457 RNU6-395P-201ENST00000365662 106 ntBASIC2.16□□□□□ -2.06
MSH4O15457 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
MSH4O15457 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
MSH4O15457 RNU5A-2P-201ENST00000384337 116 ntBASIC2.16□□□□□ -2.06
MSH4O15457 RNU6-748P-201ENST00000384648 107 ntBASIC2.16□□□□□ -2.06
MSH4O15457 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC2.16□□□□□ -2.06
MSH4O15457 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC2.16□□□□□ -2.06
MSH4O15457 RPS24P1-201ENST00000438550 371 ntBASIC2.16□□□□□ -2.06
MSH4O15457 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC2.16□□□□□ -2.06
MSH4O15457 TAF9P1-201ENST00000445421 515 ntBASIC2.16□□□□□ -2.06
MSH4O15457 ART2BP-201ENST00000453501 499 ntBASIC2.16□□□□□ -2.06
MSH4O15457 TAF9P2-201ENST00000454958 515 ntBASIC2.16□□□□□ -2.06
MSH4O15457 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.16□□□□□ -2.06
MSH4O15457 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.16□□□□□ -2.06
MSH4O15457 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC2.16□□□□□ -2.06
MSH4O15457 RNA5SP112-201ENST00000515937 99 ntBASIC2.16□□□□□ -2.06
MSH4O15457 Y_RNA.717-201ENST00000517106 92 ntBASIC2.16□□□□□ -2.06
MSH4O15457 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.16□□□□□ -2.06
MSH4O15457 MIR5571-201ENST00000577998 113 ntBASIC2.16□□□□□ -2.06
MSH4O15457 MIR4524B-201ENST00000581569 115 ntBASIC2.16□□□□□ -2.06
MSH4O15457 AC009977.1-201ENST00000586015 570 ntBASIC2.16□□□□□ -2.06
MSH4O15457 AC025811.1-201ENST00000604312 472 ntBASIC2.16□□□□□ -2.06
MSH4O15457 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC2.16□□□□□ -2.06
MSH4O15457 AC241585.2-209ENST00000638217 143 ntBASIC2.16□□□□□ -2.06
MSH4O15457 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.16□□□□□ -2.06
MSH4O15457 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.16□□□□□ -2.06
MSH4O15457 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.16□□□□□ -2.06
MSH4O15457 RNU6-166P-201ENST00000384371 107 ntBASIC2.15□□□□□ -2.07
MSH4O15457 RPL23AP32-201ENST00000395315 459 ntBASIC2.15□□□□□ -2.07
MSH4O15457 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
MSH4O15457 RNU2-8P-201ENST00000410727 190 ntBASIC2.15□□□□□ -2.07
MSH4O15457 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.15□□□□□ -2.07
MSH4O15457 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.15□□□□□ -2.07
MSH4O15457 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.15□□□□□ -2.07
MSH4O15457 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.15□□□□□ -2.07
MSH4O15457 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.15□□□□□ -2.07
MSH4O15457 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC2.15□□□□□ -2.07
MSH4O15457 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
MSH4O15457 AC003989.2-201ENST00000440224 169 ntBASIC2.15□□□□□ -2.07
MSH4O15457 AC003071.1-201ENST00000451219 789 ntBASIC2.15□□□□□ -2.07
MSH4O15457 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.15□□□□□ -2.07
MSH4O15457 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC2.15□□□□□ -2.07
MSH4O15457 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.15□□□□□ -2.07
MSH4O15457 RPL21P99-201ENST00000480369 423 ntBASIC2.15□□□□□ -2.07
MSH4O15457 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.15□□□□□ -2.07
MSH4O15457 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.15□□□□□ -2.07
MSH4O15457 MIR5694-201ENST00000581190 76 ntBASIC2.15□□□□□ -2.07
MSH4O15457 AC105245.1-201ENST00000581934 244 ntBASIC2.15□□□□□ -2.07
MSH4O15457 Z99289.3-201ENST00000605586 594 ntBASIC2.15□□□□□ -2.07
MSH4O15457 AL451064.1-201ENST00000607718 471 ntBASIC2.15□□□□□ -2.07
MSH4O15457 AL359547.2-201ENST00000615810 418 ntBASIC2.15□□□□□ -2.07
MSH4O15457 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
MSH4O15457 AC024940.5-201ENST00000622889 474 ntBASIC2.15□□□□□ -2.07
MSH4O15457 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.15□□□□□ -2.07
MSH4O15457 AC007494.3-201ENST00000624660 743 ntBASIC2.15□□□□□ -2.07
MSH4O15457 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC2.15□□□□□ -2.07
MSH4O15457 AP000553.5-201ENST00000641933 54 ntBASIC2.15□□□□□ -2.07
MSH4O15457 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.15□□□□□ -2.07
MSH4O15457 AP006437.1-201ENST00000641440 3685 ntBASIC2.14□□□□□ -2.07
MSH4O15457 RNU6-641P-201ENST00000384006 107 ntBASIC2.14□□□□□ -2.07
MSH4O15457 MIR518D-201ENST00000385014 87 ntBASIC2.14□□□□□ -2.07
MSH4O15457 RPS3AP36-201ENST00000398190 775 ntBASIC2.14□□□□□ -2.07
MSH4O15457 AC019129.1-201ENST00000403786 261 ntBASIC2.14□□□□□ -2.07
MSH4O15457 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.14□□□□□ -2.07
MSH4O15457 U6atac.2-201ENST00000408644 118 ntBASIC2.14□□□□□ -2.07
MSH4O15457 AC114491.1-201ENST00000416095 246 ntBASIC2.14□□□□□ -2.07
MSH4O15457 MTND1P23-201ENST00000416931 372 ntBASIC2.14□□□□□ -2.07
MSH4O15457 AC009518.2-201ENST00000418056 731 ntBASIC2.14□□□□□ -2.07
MSH4O15457 EIF1AXP1-201ENST00000419267 435 ntBASIC2.14□□□□□ -2.07
MSH4O15457 AC003685.2-201ENST00000422795 395 ntBASIC2.14□□□□□ -2.07
MSH4O15457 AL591806.2-201ENST00000433122 173 ntBASIC2.14□□□□□ -2.07
MSH4O15457 AL031659.1-201ENST00000447075 539 ntBASIC2.14□□□□□ -2.07
MSH4O15457 AL583843.1-201ENST00000456070 346 ntBASIC2.14□□□□□ -2.07
MSH4O15457 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.14□□□□□ -2.07
MSH4O15457 AC080013.2-201ENST00000460866 323 ntBASIC2.14□□□□□ -2.07
MSH4O15457 AC011005.2-201ENST00000487324 359 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 133.5 ms