Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 Z98749.2-208ENST00000381646 500 ntBASIC2.74□□□□□ -1.97
TO15178 RNU6-851P-201ENST00000384565 107 ntBASIC2.74□□□□□ -1.97
TO15178 MIR491-201ENST00000384877 84 ntBASIC2.74□□□□□ -1.97
TO15178 MIR34A-201ENST00000385130 110 ntBASIC2.74□□□□□ -1.97
TO15178 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.74□□□□□ -1.97
TO15178 AL513043.1-201ENST00000439124 535 ntBASIC2.74□□□□□ -1.97
TO15178 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.74□□□□□ -1.97
TO15178 GSTA11P-201ENST00000452866 669 ntBASIC2.74□□□□□ -1.97
TO15178 BTF3P15-201ENST00000455606 336 ntBASIC2.74□□□□□ -1.97
TO15178 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.74□□□□□ -1.97
TO15178 AC103975.1-201ENST00000482506 483 ntBASIC2.74□□□□□ -1.97
TO15178 AC079140.5-201ENST00000507882 310 ntBASIC2.74□□□□□ -1.97
TO15178 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
TO15178 MTND3P25-201ENST00000509243 135 ntBASIC2.74□□□□□ -1.97
TO15178 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.74□□□□□ -1.97
TO15178 AC011352.1-201ENST00000512300 793 ntBASIC2.74□□□□□ -1.97
TO15178 RNU4-29P-201ENST00000515943 174 ntBASIC2.74□□□□□ -1.97
TO15178 AC009812.2-201ENST00000517657 457 ntBASIC2.74□□□□□ -1.97
TO15178 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.74□□□□□ -1.97
TO15178 BNIP3P6-201ENST00000549284 499 ntBASIC2.74□□□□□ -1.97
TO15178 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC2.74□□□□□ -1.97
TO15178 AC138761.3-201ENST00000579993 334 ntBASIC2.74□□□□□ -1.97
TO15178 AC073539.2-201ENST00000597113 165 ntBASIC2.74□□□□□ -1.97
TO15178 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.74□□□□□ -1.97
TO15178 AL161756.2-201ENST00000604597 246 ntBASIC2.74□□□□□ -1.97
TO15178 AC087045.1-201ENST00000605856 382 ntBASIC2.74□□□□□ -1.97
TO15178 DISC2.1-201ENST00000612827 205 ntBASIC2.74□□□□□ -1.97
TO15178 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.74□□□□□ -1.97
TO15178 MIR6134-201ENST00000617606 109 ntBASIC2.74□□□□□ -1.97
TO15178 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
TO15178 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
TO15178 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
TO15178 AL161431.1-201ENST00000618966 4205 ntBASIC2.74□□□□□ -1.97
TO15178 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
TO15178 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
TO15178 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.73□□□□□ -1.97
TO15178 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
TO15178 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
TO15178 SNORD3E-201ENST00000362899 217 ntBASIC2.73□□□□□ -1.97
TO15178 RNU6-1090P-201ENST00000364065 94 ntBASIC2.73□□□□□ -1.97
TO15178 SNORD14B-201ENST00000364533 90 ntBASIC2.73□□□□□ -1.97
TO15178 RNU1-140P-201ENST00000365040 165 ntBASIC2.73□□□□□ -1.97
TO15178 RNU6-750P-201ENST00000390946 107 ntBASIC2.73□□□□□ -1.97
TO15178 RNU6-908P-201ENST00000410160 94 ntBASIC2.73□□□□□ -1.97
TO15178 RNU2-49P-201ENST00000410666 184 ntBASIC2.73□□□□□ -1.97
TO15178 RNU6-607P-201ENST00000411283 108 ntBASIC2.73□□□□□ -1.97
TO15178 AC096649.2-201ENST00000416186 393 ntBASIC2.73□□□□□ -1.97
TO15178 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.73□□□□□ -1.97
TO15178 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC2.73□□□□□ -1.97
TO15178 RPS15AP7-201ENST00000439294 405 ntBASIC2.73□□□□□ -1.97
TO15178 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.73□□□□□ -1.97
TO15178 PRPS1P1-201ENST00000445305 876 ntBASIC2.73□□□□□ -1.97
TO15178 NIPA2P5-201ENST00000452282 464 ntBASIC2.73□□□□□ -1.97
TO15178 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.73□□□□□ -1.97
TO15178 AC091885.1-201ENST00000506658 268 ntBASIC2.73□□□□□ -1.97
TO15178 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.73□□□□□ -1.97
TO15178 MIR892C-201ENST00000516410 77 ntBASIC2.73□□□□□ -1.97
TO15178 MTND1P5-201ENST00000517906 940 ntBASIC2.73□□□□□ -1.97
TO15178 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.73□□□□□ -1.97
TO15178 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.73□□□□□ -1.97
TO15178 MTND1P35-201ENST00000526739 508 ntBASIC2.73□□□□□ -1.97
TO15178 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
TO15178 GLYCAM1-201ENST00000546596 285 ntBASIC2.73□□□□□ -1.97
TO15178 AL138976.2-201ENST00000563989 694 ntBASIC2.73□□□□□ -1.97
TO15178 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC2.73□□□□□ -1.97
TO15178 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.73□□□□□ -1.97
TO15178 AC090616.3-201ENST00000582184 217 ntBASIC2.73□□□□□ -1.97
TO15178 MIR4424-201ENST00000585257 86 ntBASIC2.73□□□□□ -1.97
TO15178 AL162274.2-201ENST00000614406 332 ntBASIC2.73□□□□□ -1.97
TO15178 AC022418.1-201ENST00000624118 445 ntBASIC2.73□□□□□ -1.97
TO15178 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.73□□□□□ -1.97
TO15178 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.73□□□□□ -1.97
TO15178 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
TO15178 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
TO15178 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
TO15178 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.72□□□□□ -1.97
TO15178 RNU4-66P-201ENST00000365199 138 ntBASIC2.72□□□□□ -1.97
TO15178 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.72□□□□□ -1.97
TO15178 Y_RNA.399-201ENST00000383955 105 ntBASIC2.72□□□□□ -1.97
TO15178 Y_RNA.453-201ENST00000384223 109 ntBASIC2.72□□□□□ -1.97
TO15178 MIR10A-201ENST00000385043 110 ntBASIC2.72□□□□□ -1.97
TO15178 SNORA16.2-201ENST00000390991 127 ntBASIC2.72□□□□□ -1.97
TO15178 SNORA48.5-201ENST00000391143 135 ntBASIC2.72□□□□□ -1.97
TO15178 SNORD115-47-201ENST00000391226 86 ntBASIC2.72□□□□□ -1.97
TO15178 AL122016.1-201ENST00000403365 367 ntBASIC2.72□□□□□ -1.97
TO15178 SNORA11.1-201ENST00000408133 129 ntBASIC2.72□□□□□ -1.97
TO15178 AL592148.1-201ENST00000413568 445 ntBASIC2.72□□□□□ -1.97
TO15178 TOMM20P4-201ENST00000427861 435 ntBASIC2.72□□□□□ -1.97
TO15178 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.72□□□□□ -1.97
TO15178 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.72□□□□□ -1.97
TO15178 AL121769.1-201ENST00000469473 401 ntBASIC2.72□□□□□ -1.97
TO15178 AC083906.5-201ENST00000503722 328 ntBASIC2.72□□□□□ -1.97
TO15178 FAM92A1P2-202ENST00000504766 877 ntBASIC2.72□□□□□ -1.97
TO15178 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.72□□□□□ -1.97
TO15178 RNU2-69P-201ENST00000516061 100 ntBASIC2.72□□□□□ -1.97
TO15178 SNORD19.2-201ENST00000516978 73 ntBASIC2.72□□□□□ -1.97
TO15178 AC006199.1-201ENST00000548728 219 ntBASIC2.72□□□□□ -1.97
TO15178 AL121821.2-201ENST00000556081 394 ntBASIC2.72□□□□□ -1.97
TO15178 AC092325.1-201ENST00000566449 554 ntBASIC2.72□□□□□ -1.97
TO15178 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 134.9 ms