Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 AL135790.2-201ENST00000437701 267 ntBASIC0.69□□□□□ -2.3
CHD1O14646 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC0.69□□□□□ -2.3
CHD1O14646 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC0.69□□□□□ -2.3
CHD1O14646 CYP2C59P-201ENST00000457790 269 ntBASIC0.69□□□□□ -2.3
CHD1O14646 AP003066.2-201ENST00000529375 555 ntBASIC0.69□□□□□ -2.3
CHD1O14646 LINC00557-201ENST00000563184 1279 ntBASIC0.69□□□□□ -2.3
CHD1O14646 ABBA01006766.1-201ENST00000584728 294 ntBASIC0.69□□□□□ -2.3
CHD1O14646 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC0.69□□□□□ -2.3
CHD1O14646 AL359314.1-201ENST00000616913 261 ntBASIC0.69□□□□□ -2.3
CHD1O14646 Z99571.1-201ENST00000636677 394 ntBASIC0.69□□□□□ -2.3
CHD1O14646 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.69□□□□□ -2.3
CHD1O14646 AC110491.1-201ENST00000562191 2010 ntBASIC0.68□□□□□ -2.3
CHD1O14646 MIR518D-201ENST00000385014 87 ntBASIC0.68□□□□□ -2.3
CHD1O14646 MIR29C-201ENST00000385231 88 ntBASIC0.68□□□□□ -2.3
CHD1O14646 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
CHD1O14646 AC083875.1-201ENST00000419509 405 ntBASIC0.68□□□□□ -2.3
CHD1O14646 AL590383.1-201ENST00000428602 75 ntBASIC0.68□□□□□ -2.3
CHD1O14646 FCF1P6-201ENST00000456841 595 ntBASIC0.68□□□□□ -2.3
CHD1O14646 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
CHD1O14646 AC091435.1-201ENST00000505442 584 ntBASIC0.68□□□□□ -2.3
CHD1O14646 AC004817.2-201ENST00000561794 651 ntBASIC0.68□□□□□ -2.3
CHD1O14646 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC0.68□□□□□ -2.3
CHD1O14646 SUMO2P14-201ENST00000604488 293 ntBASIC0.68□□□□□ -2.3
CHD1O14646 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC0.68□□□□□ -2.3
CHD1O14646 SNORA2A-201ENST00000383885 135 ntBASIC0.67□□□□□ -2.3
CHD1O14646 RPL21P24-201ENST00000413752 448 ntBASIC0.67□□□□□ -2.3
CHD1O14646 RPL30P7-201ENST00000479312 323 ntBASIC0.67□□□□□ -2.3
CHD1O14646 SCARNA1-201ENST00000517138 166 ntBASIC0.67□□□□□ -2.3
CHD1O14646 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC0.67□□□□□ -2.3
CHD1O14646 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
CHD1O14646 RNU6-140P-201ENST00000384566 108 ntBASIC0.67□□□□□ -2.3
CHD1O14646 AC121161.1-201ENST00000510606 652 ntBASIC0.67□□□□□ -2.3
CHD1O14646 AC022483.1-201ENST00000514020 567 ntBASIC0.67□□□□□ -2.3
CHD1O14646 SNORA4.4-201ENST00000515921 135 ntBASIC0.67□□□□□ -2.3
CHD1O14646 HMSD-204ENST00000526932 162 ntTSL 3 BASIC0.67□□□□□ -2.3
CHD1O14646 AC233702.2-202ENST00000562547 291 ntBASIC0.67□□□□□ -2.3
CHD1O14646 MIR4802-201ENST00000581881 80 ntBASIC0.67□□□□□ -2.3
CHD1O14646 AC008751.2-201ENST00000597885 980 ntBASIC0.67□□□□□ -2.3
CHD1O14646 AL589743.7-201ENST00000612637 233 ntBASIC0.67□□□□□ -2.3
CHD1O14646 MIR8065-201ENST00000620577 100 ntBASIC0.67□□□□□ -2.3
CHD1O14646 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
CHD1O14646 RNU6-251P-201ENST00000363235 104 ntBASIC0.66□□□□□ -2.3
CHD1O14646 MTCO1P56-201ENST00000401674 224 ntBASIC0.66□□□□□ -2.3
CHD1O14646 RNU6-733P-201ENST00000410759 104 ntBASIC0.66□□□□□ -2.3
CHD1O14646 PIGFP2-201ENST00000421400 651 ntBASIC0.66□□□□□ -2.3
CHD1O14646 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC0.66□□□□□ -2.3
CHD1O14646 PRPS1P1-201ENST00000445305 876 ntBASIC0.66□□□□□ -2.3
CHD1O14646 AL035666.1-201ENST00000446195 348 ntBASIC0.66□□□□□ -2.3
CHD1O14646 snoU13.9-201ENST00000458927 103 ntBASIC0.66□□□□□ -2.3
CHD1O14646 RNU6-1256P-201ENST00000516539 103 ntBASIC0.66□□□□□ -2.3
CHD1O14646 AC124293.1-201ENST00000530034 493 ntBASIC0.66□□□□□ -2.3
CHD1O14646 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.66□□□□□ -2.3
CHD1O14646 AC013470.4-201ENST00000619978 986 ntBASIC0.66□□□□□ -2.3
CHD1O14646 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC0.66□□□□□ -2.3
CHD1O14646 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
CHD1O14646 RNU5A-1-201ENST00000362698 116 ntBASIC0.65□□□□□ -2.31
CHD1O14646 SNORD82-201ENST00000365530 70 ntBASIC0.65□□□□□ -2.31
CHD1O14646 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
CHD1O14646 SNORD51-201ENST00000384320 80 ntBASIC0.65□□□□□ -2.31
CHD1O14646 MIR1283-2-201ENST00000408621 87 ntBASIC0.65□□□□□ -2.31
CHD1O14646 NCOR1P3-201ENST00000420479 303 ntBASIC0.65□□□□□ -2.31
CHD1O14646 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC0.65□□□□□ -2.31
CHD1O14646 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
CHD1O14646 AL359212.1-201ENST00000556608 614 ntBASIC0.65□□□□□ -2.31
CHD1O14646 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC0.65□□□□□ -2.31
CHD1O14646 MIR6130-201ENST00000619419 109 ntBASIC0.65□□□□□ -2.31
CHD1O14646 AC091965.5-201ENST00000624785 342 ntBASIC0.65□□□□□ -2.31
CHD1O14646 AC017104.5-201ENST00000637647 639 ntBASIC0.65□□□□□ -2.31
CHD1O14646 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
CHD1O14646 RNU6-386P-201ENST00000362650 107 ntBASIC0.64□□□□□ -2.31
CHD1O14646 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC0.64□□□□□ -2.31
CHD1O14646 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC0.64□□□□□ -2.31
CHD1O14646 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC0.64□□□□□ -2.31
CHD1O14646 AC079140.2-201ENST00000506193 142 ntBASIC0.64□□□□□ -2.31
CHD1O14646 AC005832.3-201ENST00000537929 631 ntBASIC0.64□□□□□ -2.31
CHD1O14646 AL022345.1-201ENST00000607292 135 ntBASIC0.64□□□□□ -2.31
CHD1O14646 AC117490.2-201ENST00000610042 594 ntBASIC0.64□□□□□ -2.31
CHD1O14646 AL355472.4-201ENST00000610233 626 ntBASIC0.64□□□□□ -2.31
CHD1O14646 U6.107-201ENST00000637108 79 ntBASIC0.64□□□□□ -2.31
CHD1O14646 MIR515-2-201ENST00000384883 83 ntBASIC0.64□□□□□ -2.31
CHD1O14646 MIR515-1-201ENST00000384884 83 ntBASIC0.64□□□□□ -2.31
CHD1O14646 ZNF92P1Y-201ENST00000415010 1191 ntBASIC0.64□□□□□ -2.31
CHD1O14646 AC009518.2-201ENST00000418056 731 ntBASIC0.64□□□□□ -2.31
CHD1O14646 C1DP1-201ENST00000426049 402 ntBASIC0.64□□□□□ -2.31
CHD1O14646 RPL26P6-201ENST00000440913 438 ntBASIC0.64□□□□□ -2.31
CHD1O14646 MTND5P8-201ENST00000449817 1083 ntBASIC0.64□□□□□ -2.31
CHD1O14646 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC0.64□□□□□ -2.31
CHD1O14646 TRBVB-201ENST00000477100 408 ntBASIC0.64□□□□□ -2.31
CHD1O14646 LARP1BP2-201ENST00000486594 519 ntBASIC0.64□□□□□ -2.31
CHD1O14646 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.64□□□□□ -2.31
CHD1O14646 AC034114.1-201ENST00000520293 285 ntBASIC0.64□□□□□ -2.31
CHD1O14646 AP003122.4-201ENST00000530980 758 ntBASIC0.64□□□□□ -2.31
CHD1O14646 LSM6P2-201ENST00000552208 177 ntBASIC0.64□□□□□ -2.31
CHD1O14646 AC019288.1-201ENST00000557918 224 ntBASIC0.64□□□□□ -2.31
CHD1O14646 AC005261.5-201ENST00000596280 355 ntBASIC0.64□□□□□ -2.31
CHD1O14646 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC0.63□□□□□ -2.31
CHD1O14646 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
CHD1O14646 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
CHD1O14646 RNU6-486P-201ENST00000363116 107 ntBASIC0.63□□□□□ -2.31
CHD1O14646 RNU6-271P-201ENST00000363858 105 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms