Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 ACA59.2-201ENST00000517061 156 ntBASIC1.35□□□□□ -2.19
UBFD1O14562 AC068338.1-201ENST00000565567 176 ntBASIC1.35□□□□□ -2.19
UBFD1O14562 AL354943.1-201ENST00000572103 781 ntBASIC1.35□□□□□ -2.19
UBFD1O14562 NDUFA8P1-201ENST00000605525 367 ntBASIC1.35□□□□□ -2.19
UBFD1O14562 AC034229.4-201ENST00000607861 441 ntBASIC1.35□□□□□ -2.19
UBFD1O14562 PART1_2.1-201ENST00000612397 250 ntBASIC1.35□□□□□ -2.19
UBFD1O14562 AL157834.3-201ENST00000615543 103 ntBASIC1.35□□□□□ -2.19
UBFD1O14562 AC013470.4-201ENST00000619978 986 ntBASIC1.35□□□□□ -2.19
UBFD1O14562 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.35□□□□□ -2.19
UBFD1O14562 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.35□□□□□ -2.19
UBFD1O14562 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
UBFD1O14562 RNU6-898P-201ENST00000365627 104 ntBASIC1.34□□□□□ -2.19
UBFD1O14562 RNU6-174P-201ENST00000410406 106 ntBASIC1.34□□□□□ -2.19
UBFD1O14562 RNU2-63P-201ENST00000410792 194 ntBASIC1.34□□□□□ -2.19
UBFD1O14562 USP9YP6-201ENST00000413550 854 ntBASIC1.34□□□□□ -2.19
UBFD1O14562 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.34□□□□□ -2.19
UBFD1O14562 HMGB1P31-201ENST00000437242 427 ntBASIC1.34□□□□□ -2.19
UBFD1O14562 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.34□□□□□ -2.19
UBFD1O14562 SNRPGP13-201ENST00000442212 177 ntBASIC1.34□□□□□ -2.19
UBFD1O14562 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC1.34□□□□□ -2.19
UBFD1O14562 snoU13.18-201ENST00000459483 104 ntBASIC1.34□□□□□ -2.19
UBFD1O14562 TOMM22P6-201ENST00000465035 409 ntBASIC1.34□□□□□ -2.19
UBFD1O14562 AC104629.1-201ENST00000494226 508 ntBASIC1.34□□□□□ -2.19
UBFD1O14562 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.34□□□□□ -2.19
UBFD1O14562 AC116353.3-201ENST00000511215 249 ntBASIC1.34□□□□□ -2.19
UBFD1O14562 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.34□□□□□ -2.19
UBFD1O14562 OR5AL2P-201ENST00000532185 920 ntBASIC1.34□□□□□ -2.19
UBFD1O14562 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.34□□□□□ -2.19
UBFD1O14562 AC079598.5-201ENST00000547460 117 ntBASIC1.34□□□□□ -2.19
UBFD1O14562 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC1.34□□□□□ -2.19
UBFD1O14562 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.34□□□□□ -2.19
UBFD1O14562 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.34□□□□□ -2.19
UBFD1O14562 AC243960.4-201ENST00000600532 288 ntBASIC1.34□□□□□ -2.19
UBFD1O14562 AL713866.2-201ENST00000603579 219 ntBASIC1.34□□□□□ -2.19
UBFD1O14562 AC012360.2-201ENST00000609349 391 ntBASIC1.34□□□□□ -2.19
UBFD1O14562 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC1.34□□□□□ -2.19
UBFD1O14562 MIR6134-201ENST00000617606 109 ntBASIC1.34□□□□□ -2.19
UBFD1O14562 MIR5739-201ENST00000619803 80 ntBASIC1.34□□□□□ -2.19
UBFD1O14562 AC138627.2-201ENST00000624202 601 ntBASIC1.34□□□□□ -2.19
UBFD1O14562 AP003400.5-201ENST00000624827 617 ntBASIC1.34□□□□□ -2.19
UBFD1O14562 AC092125.1-201ENST00000562568 1995 ntBASIC1.34□□□□□ -2.2
UBFD1O14562 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC1.34□□□□□ -2.2
UBFD1O14562 RNU1-62P-201ENST00000362599 164 ntBASIC1.33□□□□□ -2.2
UBFD1O14562 RNU1-23P-201ENST00000363361 144 ntBASIC1.33□□□□□ -2.2
UBFD1O14562 RNU6-288P-201ENST00000363690 104 ntBASIC1.33□□□□□ -2.2
UBFD1O14562 SNORA7.1-201ENST00000363750 139 ntBASIC1.33□□□□□ -2.2
UBFD1O14562 RNU6-1280P-201ENST00000365211 107 ntBASIC1.33□□□□□ -2.2
UBFD1O14562 CISD1P1-201ENST00000393907 327 ntBASIC1.33□□□□□ -2.2
UBFD1O14562 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
UBFD1O14562 RNU6-955P-201ENST00000410497 104 ntBASIC1.33□□□□□ -2.2
UBFD1O14562 RNA5SP450-201ENST00000411206 102 ntBASIC1.33□□□□□ -2.2
UBFD1O14562 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1.33□□□□□ -2.2
UBFD1O14562 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC1.33□□□□□ -2.2
UBFD1O14562 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
UBFD1O14562 RPL23AP6-201ENST00000446637 472 ntBASIC1.33□□□□□ -2.2
UBFD1O14562 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.33□□□□□ -2.2
UBFD1O14562 AC007327.1-201ENST00000447461 264 ntBASIC1.33□□□□□ -2.2
UBFD1O14562 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC1.33□□□□□ -2.2
UBFD1O14562 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.33□□□□□ -2.2
UBFD1O14562 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.33□□□□□ -2.2
UBFD1O14562 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC1.33□□□□□ -2.2
UBFD1O14562 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.33□□□□□ -2.2
UBFD1O14562 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
UBFD1O14562 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.33□□□□□ -2.2
UBFD1O14562 AL031274.2-201ENST00000599419 203 ntBASIC1.33□□□□□ -2.2
UBFD1O14562 AL596327.1-201ENST00000603629 213 ntBASIC1.33□□□□□ -2.2
UBFD1O14562 AC007363.1-201ENST00000604736 620 ntBASIC1.33□□□□□ -2.2
UBFD1O14562 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
UBFD1O14562 AC097468.3-201ENST00000607956 456 ntBASIC1.33□□□□□ -2.2
UBFD1O14562 AC009974.1-201ENST00000608881 455 ntBASIC1.33□□□□□ -2.2
UBFD1O14562 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.33□□□□□ -2.2
UBFD1O14562 AL138960.2-201ENST00000625145 535 ntBASIC1.33□□□□□ -2.2
UBFD1O14562 AC106858.1-201ENST00000637497 429 ntBASIC1.33□□□□□ -2.2
UBFD1O14562 AC027514.1-201ENST00000588561 1603 ntBASIC1.33□□□□□ -2.2
UBFD1O14562 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
UBFD1O14562 Y_RNA.796-201ENST00000364268 102 ntBASIC1.32□□□□□ -2.2
UBFD1O14562 Y_RNA.799-201ENST00000364992 102 ntBASIC1.32□□□□□ -2.2
UBFD1O14562 SNORA25B-201ENST00000365507 128 ntBASIC1.32□□□□□ -2.2
UBFD1O14562 MIR518D-201ENST00000385014 87 ntBASIC1.32□□□□□ -2.2
UBFD1O14562 MIR95-201ENST00000385072 81 ntBASIC1.32□□□□□ -2.2
UBFD1O14562 AC078974.1-201ENST00000411597 223 ntBASIC1.32□□□□□ -2.2
UBFD1O14562 RPS24P7-201ENST00000416921 246 ntBASIC1.32□□□□□ -2.2
UBFD1O14562 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.32□□□□□ -2.2
UBFD1O14562 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.32□□□□□ -2.2
UBFD1O14562 TXNL1P1-201ENST00000429528 554 ntBASIC1.32□□□□□ -2.2
UBFD1O14562 AL353706.1-201ENST00000436728 494 ntBASIC1.32□□□□□ -2.2
UBFD1O14562 AL161788.1-201ENST00000441805 169 ntBASIC1.32□□□□□ -2.2
UBFD1O14562 BRK1P2-201ENST00000442875 223 ntBASIC1.32□□□□□ -2.2
UBFD1O14562 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC1.32□□□□□ -2.2
UBFD1O14562 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC1.32□□□□□ -2.2
UBFD1O14562 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.32□□□□□ -2.2
UBFD1O14562 RPS29P23-201ENST00000458635 123 ntBASIC1.32□□□□□ -2.2
UBFD1O14562 RPL7P43-201ENST00000478876 753 ntBASIC1.32□□□□□ -2.2
UBFD1O14562 RPL22P13-201ENST00000493291 347 ntBASIC1.32□□□□□ -2.2
UBFD1O14562 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.32□□□□□ -2.2
UBFD1O14562 AC109445.1-201ENST00000512356 383 ntBASIC1.32□□□□□ -2.2
UBFD1O14562 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.32□□□□□ -2.2
UBFD1O14562 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC1.32□□□□□ -2.2
UBFD1O14562 AP003033.1-201ENST00000527244 415 ntBASIC1.32□□□□□ -2.2
UBFD1O14562 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 167.6 ms