Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AC104058.1-201ENST00000448028 297 ntBASIC3.52□□□□□ -1.85
TRIM38O00635 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.52□□□□□ -1.85
TRIM38O00635 U3.44-201ENST00000458938 192 ntBASIC3.52□□□□□ -1.85
TRIM38O00635 Y_RNA.635-201ENST00000459041 101 ntBASIC3.52□□□□□ -1.85
TRIM38O00635 AC010401.1-201ENST00000463867 348 ntBASIC3.52□□□□□ -1.85
TRIM38O00635 HMGN2P13-201ENST00000476476 274 ntBASIC3.52□□□□□ -1.85
TRIM38O00635 AC025518.1-201ENST00000479856 347 ntBASIC3.52□□□□□ -1.85
TRIM38O00635 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.52□□□□□ -1.85
TRIM38O00635 RBBP4P6-201ENST00000508098 202 ntBASIC3.52□□□□□ -1.85
TRIM38O00635 FAM206BP-201ENST00000510179 541 ntBASIC3.52□□□□□ -1.85
TRIM38O00635 SMURF2P1-201ENST00000514992 481 ntBASIC3.52□□□□□ -1.85
TRIM38O00635 RN7SKP219-201ENST00000516825 296 ntBASIC3.52□□□□□ -1.85
TRIM38O00635 RNA5SP165-201ENST00000517142 115 ntBASIC3.52□□□□□ -1.85
TRIM38O00635 RPL7P20-201ENST00000520308 745 ntBASIC3.52□□□□□ -1.85
TRIM38O00635 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
TRIM38O00635 AP005435.4-201ENST00000529514 284 ntBASIC3.52□□□□□ -1.85
TRIM38O00635 AP000889.1-201ENST00000530968 660 ntBASIC3.52□□□□□ -1.85
TRIM38O00635 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.52□□□□□ -1.85
TRIM38O00635 AP000867.2-201ENST00000532468 320 ntBASIC3.52□□□□□ -1.85
TRIM38O00635 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.52□□□□□ -1.85
TRIM38O00635 MIR4680-201ENST00000580906 66 ntBASIC3.52□□□□□ -1.85
TRIM38O00635 AC005014.2-201ENST00000607795 599 ntBASIC3.52□□□□□ -1.85
TRIM38O00635 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.52□□□□□ -1.85
TRIM38O00635 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.52□□□□□ -1.85
TRIM38O00635 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.52□□□□□ -1.85
TRIM38O00635 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
TRIM38O00635 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
TRIM38O00635 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
TRIM38O00635 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
TRIM38O00635 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.51□□□□□ -1.85
TRIM38O00635 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.51□□□□□ -1.85
TRIM38O00635 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.51□□□□□ -1.85
TRIM38O00635 RNU6-395P-201ENST00000365662 106 ntBASIC3.51□□□□□ -1.85
TRIM38O00635 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.51□□□□□ -1.85
TRIM38O00635 RNU6-26P-201ENST00000383985 107 ntBASIC3.51□□□□□ -1.85
TRIM38O00635 MTCYBP4-201ENST00000401524 249 ntBASIC3.51□□□□□ -1.85
TRIM38O00635 NDUFB4P4-201ENST00000404822 243 ntBASIC3.51□□□□□ -1.85
TRIM38O00635 MIR1302-3-201ENST00000408128 138 ntBASIC3.51□□□□□ -1.85
TRIM38O00635 RNA5SP120-201ENST00000410900 112 ntBASIC3.51□□□□□ -1.85
TRIM38O00635 AC005300.1-201ENST00000428401 373 ntBASIC3.51□□□□□ -1.85
TRIM38O00635 SUMO1P3-201ENST00000439961 304 ntBASIC3.51□□□□□ -1.85
TRIM38O00635 AC115115.1-201ENST00000449927 248 ntBASIC3.51□□□□□ -1.85
TRIM38O00635 SUMO1P2-201ENST00000452524 304 ntBASIC3.51□□□□□ -1.85
TRIM38O00635 AL162395.1-201ENST00000457882 422 ntBASIC3.51□□□□□ -1.85
TRIM38O00635 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.51□□□□□ -1.85
TRIM38O00635 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.51□□□□□ -1.85
TRIM38O00635 SUMO2P6-201ENST00000505273 288 ntBASIC3.51□□□□□ -1.85
TRIM38O00635 SNORD59.2-201ENST00000516873 68 ntBASIC3.51□□□□□ -1.85
TRIM38O00635 RNU6-928P-201ENST00000516876 104 ntBASIC3.51□□□□□ -1.85
TRIM38O00635 RNU6-711P-201ENST00000517255 106 ntBASIC3.51□□□□□ -1.85
TRIM38O00635 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.51□□□□□ -1.85
TRIM38O00635 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.51□□□□□ -1.85
TRIM38O00635 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.51□□□□□ -1.85
TRIM38O00635 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
TRIM38O00635 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.51□□□□□ -1.85
TRIM38O00635 AL157871.3-201ENST00000557231 293 ntBASIC3.51□□□□□ -1.85
TRIM38O00635 MIR1273C-201ENST00000578669 77 ntBASIC3.51□□□□□ -1.85
TRIM38O00635 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.51□□□□□ -1.85
TRIM38O00635 AL022345.1-201ENST00000607292 135 ntBASIC3.51□□□□□ -1.85
TRIM38O00635 MIR7851-201ENST00000610611 160 ntBASIC3.51□□□□□ -1.85
TRIM38O00635 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
TRIM38O00635 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
TRIM38O00635 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
TRIM38O00635 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
TRIM38O00635 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.5□□□□□ -1.85
TRIM38O00635 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
TRIM38O00635 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
TRIM38O00635 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
TRIM38O00635 MIR30E-201ENST00000362104 92 ntBASIC3.5□□□□□ -1.85
TRIM38O00635 RNU4-35P-201ENST00000362588 141 ntBASIC3.5□□□□□ -1.85
TRIM38O00635 Y_RNA.187-201ENST00000363918 113 ntBASIC3.5□□□□□ -1.85
TRIM38O00635 RNU6-522P-201ENST00000364497 107 ntBASIC3.5□□□□□ -1.85
TRIM38O00635 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
TRIM38O00635 EI24P2-201ENST00000397776 1076 ntBASIC3.5□□□□□ -1.85
TRIM38O00635 MTHFD2P2-201ENST00000407725 247 ntBASIC3.5□□□□□ -1.85
TRIM38O00635 RPL26P27-201ENST00000414397 437 ntBASIC3.5□□□□□ -1.85
TRIM38O00635 AC099548.1-201ENST00000421443 426 ntBASIC3.5□□□□□ -1.85
TRIM38O00635 AC005326.1-201ENST00000429197 123 ntBASIC3.5□□□□□ -1.85
TRIM38O00635 BX679664.1-201ENST00000434429 253 ntBASIC3.5□□□□□ -1.85
TRIM38O00635 AC010099.1-201ENST00000455434 375 ntBASIC3.5□□□□□ -1.85
TRIM38O00635 AC092798.1-201ENST00000458542 409 ntBASIC3.5□□□□□ -1.85
TRIM38O00635 RNU7-66P-201ENST00000459469 62 ntBASIC3.5□□□□□ -1.85
TRIM38O00635 AC010655.3-201ENST00000478818 450 ntBASIC3.5□□□□□ -1.85
TRIM38O00635 RPS4XP22-201ENST00000480755 780 ntBASIC3.5□□□□□ -1.85
TRIM38O00635 MTCO1P29-201ENST00000496868 288 ntBASIC3.5□□□□□ -1.85
TRIM38O00635 AC092436.1-201ENST00000506450 503 ntBASIC3.5□□□□□ -1.85
TRIM38O00635 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.5□□□□□ -1.85
TRIM38O00635 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.5□□□□□ -1.85
TRIM38O00635 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.5□□□□□ -1.85
TRIM38O00635 AC008269.2-201ENST00000561915 1105 ntBASIC3.5□□□□□ -1.85
TRIM38O00635 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.5□□□□□ -1.85
TRIM38O00635 AC073539.2-201ENST00000597113 165 ntBASIC3.5□□□□□ -1.85
TRIM38O00635 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
TRIM38O00635 U4.1-201ENST00000620349 87 ntBASIC3.5□□□□□ -1.85
TRIM38O00635 MTND5P7-201ENST00000413558 1798 ntBASIC3.5□□□□□ -1.85
TRIM38O00635 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
TRIM38O00635 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
TRIM38O00635 RNU6-552P-201ENST00000362869 119 ntBASIC3.49□□□□□ -1.85
TRIM38O00635 Y_RNA.112-201ENST00000363250 102 ntBASIC3.49□□□□□ -1.85
TRIM38O00635 Y_RNA.188-201ENST00000363952 111 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms