Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.62□□□□□ -2.15
SMKR1H3BMG3 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.62□□□□□ -2.15
SMKR1H3BMG3 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.62□□□□□ -2.15
SMKR1H3BMG3 MIR5692A1-201ENST00000580523 69 ntBASIC1.62□□□□□ -2.15
SMKR1H3BMG3 CLPTM1LP1-201ENST00000604519 484 ntBASIC1.62□□□□□ -2.15
SMKR1H3BMG3 AL160281.1-201ENST00000605307 311 ntBASIC1.62□□□□□ -2.15
SMKR1H3BMG3 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.62□□□□□ -2.15
SMKR1H3BMG3 AC093732.2-201ENST00000607950 274 ntBASIC1.62□□□□□ -2.15
SMKR1H3BMG3 AC093648.1-201ENST00000623546 606 ntBASIC1.62□□□□□ -2.15
SMKR1H3BMG3 AC090517.3-201ENST00000625170 141 ntBASIC1.62□□□□□ -2.15
SMKR1H3BMG3 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
SMKR1H3BMG3 FARSBP1-201ENST00000435808 1778 ntBASIC1.62□□□□□ -2.15
SMKR1H3BMG3 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
SMKR1H3BMG3 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC1.61□□□□□ -2.15
SMKR1H3BMG3 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.61□□□□□ -2.15
SMKR1H3BMG3 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
SMKR1H3BMG3 KPNA2P1-201ENST00000458289 1591 ntBASIC1.61□□□□□ -2.15
SMKR1H3BMG3 Y_RNA.40-201ENST00000362645 93 ntBASIC1.61□□□□□ -2.15
SMKR1H3BMG3 RNA5SP37-201ENST00000365420 130 ntBASIC1.61□□□□□ -2.15
SMKR1H3BMG3 RNU6-546P-201ENST00000383991 107 ntBASIC1.61□□□□□ -2.15
SMKR1H3BMG3 RNU4-52P-201ENST00000384209 138 ntBASIC1.61□□□□□ -2.15
SMKR1H3BMG3 RNU6-611P-201ENST00000384276 104 ntBASIC1.61□□□□□ -2.15
SMKR1H3BMG3 RNU6-1274P-201ENST00000384557 107 ntBASIC1.61□□□□□ -2.15
SMKR1H3BMG3 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
SMKR1H3BMG3 Y_RNA.598-201ENST00000410480 95 ntBASIC1.61□□□□□ -2.15
SMKR1H3BMG3 RNU2-32P-201ENST00000411193 191 ntBASIC1.61□□□□□ -2.15
SMKR1H3BMG3 EEF1A1P40-201ENST00000412883 573 ntBASIC1.61□□□□□ -2.15
SMKR1H3BMG3 AC016769.2-201ENST00000414815 475 ntBASIC1.61□□□□□ -2.15
SMKR1H3BMG3 RPL21P90-201ENST00000415692 466 ntBASIC1.61□□□□□ -2.15
SMKR1H3BMG3 COTL1P1-201ENST00000422309 375 ntBASIC1.61□□□□□ -2.15
SMKR1H3BMG3 XKRYP1-201ENST00000423438 492 ntBASIC1.61□□□□□ -2.15
SMKR1H3BMG3 MTCYBP5-201ENST00000423752 1135 ntBASIC1.61□□□□□ -2.15
SMKR1H3BMG3 TOMM20P4-201ENST00000427861 435 ntBASIC1.61□□□□□ -2.15
SMKR1H3BMG3 SRIP2-201ENST00000428470 166 ntBASIC1.61□□□□□ -2.15
SMKR1H3BMG3 XKRYP2-201ENST00000432915 492 ntBASIC1.61□□□□□ -2.15
SMKR1H3BMG3 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC1.61□□□□□ -2.15
SMKR1H3BMG3 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.61□□□□□ -2.15
SMKR1H3BMG3 RPL7P49-201ENST00000471402 708 ntBASIC1.61□□□□□ -2.15
SMKR1H3BMG3 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC1.61□□□□□ -2.15
SMKR1H3BMG3 AC004263.1-201ENST00000479327 332 ntBASIC1.61□□□□□ -2.15
SMKR1H3BMG3 AC080014.1-201ENST00000496877 1201 ntBASIC1.61□□□□□ -2.15
SMKR1H3BMG3 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.61□□□□□ -2.15
SMKR1H3BMG3 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.61□□□□□ -2.15
SMKR1H3BMG3 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC1.61□□□□□ -2.15
SMKR1H3BMG3 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.61□□□□□ -2.15
SMKR1H3BMG3 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.61□□□□□ -2.15
SMKR1H3BMG3 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.61□□□□□ -2.15
SMKR1H3BMG3 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC1.61□□□□□ -2.15
SMKR1H3BMG3 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.61□□□□□ -2.15
SMKR1H3BMG3 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.61□□□□□ -2.15
SMKR1H3BMG3 MIR4299-201ENST00000577899 72 ntBASIC1.61□□□□□ -2.15
SMKR1H3BMG3 MIR4325-201ENST00000583049 90 ntBASIC1.61□□□□□ -2.15
SMKR1H3BMG3 AC243960.4-201ENST00000600532 288 ntBASIC1.61□□□□□ -2.15
SMKR1H3BMG3 CLIC4P2-201ENST00000601934 717 ntBASIC1.61□□□□□ -2.15
SMKR1H3BMG3 AL022161.1-201ENST00000604390 213 ntBASIC1.61□□□□□ -2.15
SMKR1H3BMG3 AL670379.2-201ENST00000604983 252 ntBASIC1.61□□□□□ -2.15
SMKR1H3BMG3 AL670379.4-201ENST00000605279 254 ntBASIC1.61□□□□□ -2.15
SMKR1H3BMG3 AC012360.2-201ENST00000609349 391 ntBASIC1.61□□□□□ -2.15
SMKR1H3BMG3 AC046143.2-201ENST00000609789 160 ntBASIC1.61□□□□□ -2.15
SMKR1H3BMG3 AC091304.9-201ENST00000612091 226 ntBASIC1.61□□□□□ -2.15
SMKR1H3BMG3 AL773524.1-201ENST00000614065 229 ntBASIC1.61□□□□□ -2.15
SMKR1H3BMG3 AL359314.1-201ENST00000616913 261 ntBASIC1.61□□□□□ -2.15
SMKR1H3BMG3 AC007792.1-201ENST00000623023 402 ntBASIC1.61□□□□□ -2.15
SMKR1H3BMG3 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC1.61□□□□□ -2.15
SMKR1H3BMG3 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.61□□□□□ -2.15
SMKR1H3BMG3 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
SMKR1H3BMG3 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
SMKR1H3BMG3 AC009487.4-201ENST00000624969 3585 ntBASIC1.6□□□□□ -2.15
SMKR1H3BMG3 GNG5P1-201ENST00000255500 204 ntBASIC1.6□□□□□ -2.15
SMKR1H3BMG3 SNORA20.2-201ENST00000383922 131 ntBASIC1.6□□□□□ -2.15
SMKR1H3BMG3 MIR670-201ENST00000390142 98 ntBASIC1.6□□□□□ -2.15
SMKR1H3BMG3 MIR676-201ENST00000390702 67 ntBASIC1.6□□□□□ -2.15
SMKR1H3BMG3 GSTA9P-201ENST00000406231 611 ntBASIC1.6□□□□□ -2.15
SMKR1H3BMG3 RAP1BP3-201ENST00000407180 549 ntBASIC1.6□□□□□ -2.15
SMKR1H3BMG3 RNU6-387P-201ENST00000411331 105 ntBASIC1.6□□□□□ -2.15
SMKR1H3BMG3 HIGD1AP15-201ENST00000416198 280 ntBASIC1.6□□□□□ -2.15
SMKR1H3BMG3 Z99497.1-201ENST00000421282 135 ntBASIC1.6□□□□□ -2.15
SMKR1H3BMG3 USP9YP18-201ENST00000425912 695 ntBASIC1.6□□□□□ -2.15
SMKR1H3BMG3 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.6□□□□□ -2.15
SMKR1H3BMG3 AC018634.1-201ENST00000437554 401 ntBASIC1.6□□□□□ -2.15
SMKR1H3BMG3 USP9YP8-201ENST00000441913 500 ntBASIC1.6□□□□□ -2.15
SMKR1H3BMG3 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.6□□□□□ -2.15
SMKR1H3BMG3 TAF9P1-201ENST00000445421 515 ntBASIC1.6□□□□□ -2.15
SMKR1H3BMG3 TAF9P2-201ENST00000454958 515 ntBASIC1.6□□□□□ -2.15
SMKR1H3BMG3 AC004924.1-201ENST00000480160 781 ntBASIC1.6□□□□□ -2.15
SMKR1H3BMG3 AC005178.1-201ENST00000508392 440 ntBASIC1.6□□□□□ -2.15
SMKR1H3BMG3 RNU6-1129P-201ENST00000515964 104 ntBASIC1.6□□□□□ -2.15
SMKR1H3BMG3 RNU1-86P-201ENST00000516108 154 ntBASIC1.6□□□□□ -2.15
SMKR1H3BMG3 RNU1-107P-201ENST00000516617 154 ntBASIC1.6□□□□□ -2.15
SMKR1H3BMG3 RNU1-40P-201ENST00000516816 164 ntBASIC1.6□□□□□ -2.15
SMKR1H3BMG3 RNU1-97P-201ENST00000516872 164 ntBASIC1.6□□□□□ -2.15
SMKR1H3BMG3 RNA5SP364-201ENST00000516938 78 ntBASIC1.6□□□□□ -2.15
SMKR1H3BMG3 RN7SKP256-201ENST00000517201 314 ntBASIC1.6□□□□□ -2.15
SMKR1H3BMG3 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.6□□□□□ -2.15
SMKR1H3BMG3 EEF1A1P37-201ENST00000522748 715 ntBASIC1.6□□□□□ -2.15
SMKR1H3BMG3 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.6□□□□□ -2.15
SMKR1H3BMG3 MTCYBP20-201ENST00000524239 1129 ntBASIC1.6□□□□□ -2.15
SMKR1H3BMG3 AP001372.4-201ENST00000524889 472 ntBASIC1.6□□□□□ -2.15
SMKR1H3BMG3 AP003392.2-201ENST00000527269 208 ntBASIC1.6□□□□□ -2.15
SMKR1H3BMG3 APAF1-207ENST00000547743 651 ntTSL 3 BASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms