Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
H3BM21 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.81□□□□□ -1.64
H3BM21 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.81□□□□□ -1.64
H3BM21 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
H3BM21 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
H3BM21 AL353743.1-202ENST00000431724 1695 ntBASIC4.8□□□□□ -1.64
H3BM21 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
H3BM21 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
H3BM21 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.8□□□□□ -1.64
H3BM21 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
H3BM21 IQCB2P-201ENST00000401788 1633 ntBASIC4.8□□□□□ -1.64
H3BM21 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.8□□□□□ -1.64
H3BM21 Y_RNA.219-201ENST00000364232 113 ntBASIC4.8□□□□□ -1.64
H3BM21 Y_RNA.293-201ENST00000364908 93 ntBASIC4.8□□□□□ -1.64
H3BM21 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.8□□□□□ -1.64
H3BM21 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.8□□□□□ -1.64
H3BM21 RNU6-813P-201ENST00000384691 107 ntBASIC4.8□□□□□ -1.64
H3BM21 MIR10A-201ENST00000385043 110 ntBASIC4.8□□□□□ -1.64
H3BM21 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
H3BM21 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.8□□□□□ -1.64
H3BM21 RPL21P66-201ENST00000426566 466 ntBASIC4.8□□□□□ -1.64
H3BM21 HSPE1P21-201ENST00000438283 308 ntBASIC4.8□□□□□ -1.64
H3BM21 RN7SL517P-201ENST00000462240 305 ntBASIC4.8□□□□□ -1.64
H3BM21 RN7SL354P-201ENST00000469282 294 ntBASIC4.8□□□□□ -1.64
H3BM21 AC020593.1-201ENST00000507399 299 ntBASIC4.8□□□□□ -1.64
H3BM21 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
H3BM21 RN7SKP122-201ENST00000515923 296 ntBASIC4.8□□□□□ -1.64
H3BM21 RNU5F-2P-201ENST00000516066 82 ntBASIC4.8□□□□□ -1.64
H3BM21 RNA5SP471-201ENST00000516971 106 ntBASIC4.8□□□□□ -1.64
H3BM21 FAM27B-201ENST00000610601 213 ntBASIC4.8□□□□□ -1.64
H3BM21 AL078604.3-201ENST00000615580 211 ntBASIC4.8□□□□□ -1.64
H3BM21 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.8□□□□□ -1.64
H3BM21 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.8□□□□□ -1.64
H3BM21 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
H3BM21 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
H3BM21 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
H3BM21 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
H3BM21 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
H3BM21 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.8□□□□□ -1.64
H3BM21 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
H3BM21 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.8□□□□□ -1.64
H3BM21 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
H3BM21 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
H3BM21 AC107027.3-201ENST00000565095 3473 ntBASIC4.8□□□□□ -1.64
H3BM21 AC006971.1-201ENST00000407916 4486 ntBASIC4.8□□□□□ -1.64
H3BM21 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.79□□□□□ -1.64
H3BM21 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
H3BM21 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
H3BM21 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
H3BM21 Y_RNA.24-201ENST00000362508 103 ntBASIC4.79□□□□□ -1.64
H3BM21 MIR888-201ENST00000401186 77 ntBASIC4.79□□□□□ -1.64
H3BM21 AL357515.1-201ENST00000402967 542 ntBASIC4.79□□□□□ -1.64
H3BM21 RPS3AP1-201ENST00000413190 320 ntBASIC4.79□□□□□ -1.64
H3BM21 AL391219.1-201ENST00000422570 483 ntBASIC4.79□□□□□ -1.64
H3BM21 AC068287.1-201ENST00000430283 295 ntBASIC4.79□□□□□ -1.64
H3BM21 AC016831.4-201ENST00000438302 307 ntBASIC4.79□□□□□ -1.64
H3BM21 HMGN2P32-201ENST00000444648 269 ntBASIC4.79□□□□□ -1.64
H3BM21 AC245047.8-201ENST00000456455 284 ntBASIC4.79□□□□□ -1.64
H3BM21 RPL23AP56-201ENST00000460778 453 ntBASIC4.79□□□□□ -1.64
H3BM21 RN7SL459P-201ENST00000481078 302 ntBASIC4.79□□□□□ -1.64
H3BM21 Y_RNA.692-201ENST00000516627 105 ntBASIC4.79□□□□□ -1.64
H3BM21 AC090142.3-201ENST00000519012 385 ntBASIC4.79□□□□□ -1.64
H3BM21 SNORA74C-1-201ENST00000580726 201 ntBASIC4.79□□□□□ -1.64
H3BM21 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.79□□□□□ -1.64
H3BM21 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.79□□□□□ -1.64
H3BM21 AC013791.1-201ENST00000616619 62 ntBASIC4.79□□□□□ -1.64
H3BM21 AL445567.2-201ENST00000618935 498 ntBASIC4.79□□□□□ -1.64
H3BM21 MIR6853-201ENST00000619642 74 ntBASIC4.79□□□□□ -1.64
H3BM21 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.79□□□□□ -1.64
H3BM21 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
H3BM21 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.79□□□□□ -1.64
H3BM21 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
H3BM21 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.78□□□□□ -1.64
H3BM21 AL450326.2-201ENST00000421913 1962 ntBASIC4.78□□□□□ -1.64
H3BM21 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
H3BM21 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
H3BM21 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
H3BM21 RNU1-32P-201ENST00000363937 159 ntBASIC4.78□□□□□ -1.64
H3BM21 SNORD58C-201ENST00000365223 64 ntBASIC4.78□□□□□ -1.64
H3BM21 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.78□□□□□ -1.64
H3BM21 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.78□□□□□ -1.64
H3BM21 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.78□□□□□ -1.64
H3BM21 AC004386.2-201ENST00000441858 148 ntBASIC4.78□□□□□ -1.64
H3BM21 AC000111.2-201ENST00000448200 210 ntBASIC4.78□□□□□ -1.64
H3BM21 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC4.78□□□□□ -1.64
H3BM21 Y_RNA.649-201ENST00000459077 103 ntBASIC4.78□□□□□ -1.64
H3BM21 RNU6-625P-201ENST00000459412 107 ntBASIC4.78□□□□□ -1.64
H3BM21 AC010265.1-201ENST00000513509 211 ntBASIC4.78□□□□□ -1.64
H3BM21 HIGD1AP3-201ENST00000515857 278 ntBASIC4.78□□□□□ -1.64
H3BM21 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.78□□□□□ -1.64
H3BM21 AL391903.3-201ENST00000612158 163 ntBASIC4.78□□□□□ -1.64
H3BM21 AL391261.4-201ENST00000616012 481 ntBASIC4.78□□□□□ -1.64
H3BM21 AC131238.1-201ENST00000617135 328 ntBASIC4.78□□□□□ -1.64
H3BM21 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.78□□□□□ -1.64
H3BM21 AC091932.3-201ENST00000624223 323 ntBASIC4.78□□□□□ -1.64
H3BM21 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
H3BM21 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
H3BM21 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
H3BM21 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
H3BM21 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms