Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.27□□□□□ -1.89
TCRBV5S1A1TA0A578 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.27□□□□□ -1.89
TCRBV5S1A1TA0A578 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.27□□□□□ -1.89
TCRBV5S1A1TA0A578 YME1L1P1-201ENST00000429435 297 ntBASIC3.27□□□□□ -1.89
TCRBV5S1A1TA0A578 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.27□□□□□ -1.89
TCRBV5S1A1TA0A578 PIGFP3-201ENST00000441918 722 ntBASIC3.27□□□□□ -1.89
TCRBV5S1A1TA0A578 AL137792.2-201ENST00000443484 235 ntBASIC3.27□□□□□ -1.89
TCRBV5S1A1TA0A578 RN7SL863P-201ENST00000462370 296 ntBASIC3.27□□□□□ -1.89
TCRBV5S1A1TA0A578 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.27□□□□□ -1.89
TCRBV5S1A1TA0A578 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.27□□□□□ -1.89
TCRBV5S1A1TA0A578 PHBP14-201ENST00000512887 367 ntBASIC3.27□□□□□ -1.89
TCRBV5S1A1TA0A578 RNU1-86P-201ENST00000516108 154 ntBASIC3.27□□□□□ -1.89
TCRBV5S1A1TA0A578 MIR892C-201ENST00000516410 77 ntBASIC3.27□□□□□ -1.89
TCRBV5S1A1TA0A578 RNU1-107P-201ENST00000516617 154 ntBASIC3.27□□□□□ -1.89
TCRBV5S1A1TA0A578 RNU6-1213P-201ENST00000517075 94 ntBASIC3.27□□□□□ -1.89
TCRBV5S1A1TA0A578 AC022634.1-201ENST00000520765 532 ntBASIC3.27□□□□□ -1.89
TCRBV5S1A1TA0A578 MIR5680-201ENST00000577577 84 ntBASIC3.27□□□□□ -1.89
TCRBV5S1A1TA0A578 UBL5P2-201ENST00000583788 219 ntBASIC3.27□□□□□ -1.89
TCRBV5S1A1TA0A578 AC016925.2-201ENST00000605108 242 ntBASIC3.27□□□□□ -1.89
TCRBV5S1A1TA0A578 AC009229.3-201ENST00000608056 282 ntBASIC3.27□□□□□ -1.89
TCRBV5S1A1TA0A578 AC019193.3-201ENST00000609144 554 ntBASIC3.27□□□□□ -1.89
TCRBV5S1A1TA0A578 AL161423.1-201ENST00000613700 262 ntBASIC3.27□□□□□ -1.89
TCRBV5S1A1TA0A578 RMST_4.1-201ENST00000616886 107 ntBASIC3.27□□□□□ -1.89
TCRBV5S1A1TA0A578 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.27□□□□□ -1.89
TCRBV5S1A1TA0A578 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
TCRBV5S1A1TA0A578 AL035425.3-201ENST00000564206 4996 ntBASIC3.27□□□□□ -1.89
TCRBV5S1A1TA0A578 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
TCRBV5S1A1TA0A578 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
TCRBV5S1A1TA0A578 MIR412-201ENST00000362142 91 ntBASIC3.26□□□□□ -1.89
TCRBV5S1A1TA0A578 SNORA31-201ENST00000362607 130 ntBASIC3.26□□□□□ -1.89
TCRBV5S1A1TA0A578 Y_RNA.112-201ENST00000363250 102 ntBASIC3.26□□□□□ -1.89
TCRBV5S1A1TA0A578 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
TCRBV5S1A1TA0A578 SNORA54-201ENST00000384281 123 ntBASIC3.26□□□□□ -1.89
TCRBV5S1A1TA0A578 RNU6-1160P-201ENST00000384546 104 ntBASIC3.26□□□□□ -1.89
TCRBV5S1A1TA0A578 SNORA46-201ENST00000384762 135 ntBASIC3.26□□□□□ -1.89
TCRBV5S1A1TA0A578 RPL21P3-201ENST00000395517 478 ntBASIC3.26□□□□□ -1.89
TCRBV5S1A1TA0A578 RNU2-71P-201ENST00000411395 189 ntBASIC3.26□□□□□ -1.89
TCRBV5S1A1TA0A578 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.26□□□□□ -1.89
TCRBV5S1A1TA0A578 AC236972.1-201ENST00000433225 199 ntBASIC3.26□□□□□ -1.89
TCRBV5S1A1TA0A578 CECR9-201ENST00000453421 199 ntBASIC3.26□□□□□ -1.89
TCRBV5S1A1TA0A578 SNORD5.1-201ENST00000458800 75 ntBASIC3.26□□□□□ -1.89
TCRBV5S1A1TA0A578 AC146507.2-201ENST00000460608 476 ntBASIC3.26□□□□□ -1.89
TCRBV5S1A1TA0A578 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.26□□□□□ -1.89
TCRBV5S1A1TA0A578 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.26□□□□□ -1.89
TCRBV5S1A1TA0A578 KC877373.1-201ENST00000479066 408 ntBASIC3.26□□□□□ -1.89
TCRBV5S1A1TA0A578 AC011005.2-201ENST00000487324 359 ntBASIC3.26□□□□□ -1.89
TCRBV5S1A1TA0A578 RN7SL20P-201ENST00000488827 297 ntBASIC3.26□□□□□ -1.89
TCRBV5S1A1TA0A578 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.26□□□□□ -1.89
TCRBV5S1A1TA0A578 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.26□□□□□ -1.89
TCRBV5S1A1TA0A578 RNU6-976P-201ENST00000516086 111 ntBASIC3.26□□□□□ -1.89
TCRBV5S1A1TA0A578 Y_RNA.670-201ENST00000516255 105 ntBASIC3.26□□□□□ -1.89
TCRBV5S1A1TA0A578 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.26□□□□□ -1.89
TCRBV5S1A1TA0A578 RNU6-988P-201ENST00000519081 107 ntBASIC3.26□□□□□ -1.89
TCRBV5S1A1TA0A578 AC245166.1-201ENST00000521012 253 ntBASIC3.26□□□□□ -1.89
TCRBV5S1A1TA0A578 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.26□□□□□ -1.89
TCRBV5S1A1TA0A578 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.26□□□□□ -1.89
TCRBV5S1A1TA0A578 ELOCP5-201ENST00000604924 333 ntBASIC3.26□□□□□ -1.89
TCRBV5S1A1TA0A578 YPEL5P2-201ENST00000605553 359 ntBASIC3.26□□□□□ -1.89
TCRBV5S1A1TA0A578 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
TCRBV5S1A1TA0A578 AC116312.1-201ENST00000606841 314 ntBASIC3.26□□□□□ -1.89
TCRBV5S1A1TA0A578 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.26□□□□□ -1.89
TCRBV5S1A1TA0A578 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.26□□□□□ -1.89
TCRBV5S1A1TA0A578 MIR8058-201ENST00000615737 89 ntBASIC3.26□□□□□ -1.89
TCRBV5S1A1TA0A578 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.26□□□□□ -1.89
TCRBV5S1A1TA0A578 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.26□□□□□ -1.89
TCRBV5S1A1TA0A578 MIR622-201ENST00000638396 96 ntBASIC3.26□□□□□ -1.89
TCRBV5S1A1TA0A578 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.26□□□□□ -1.89
TCRBV5S1A1TA0A578 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
TCRBV5S1A1TA0A578 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
TCRBV5S1A1TA0A578 AL359693.1-201ENST00000614959 2407 ntBASIC3.26□□□□□ -1.89
TCRBV5S1A1TA0A578 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
TCRBV5S1A1TA0A578 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.26□□□□□ -1.89
TCRBV5S1A1TA0A578 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
TCRBV5S1A1TA0A578 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
TCRBV5S1A1TA0A578 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
TCRBV5S1A1TA0A578 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
TCRBV5S1A1TA0A578 AC093831.2-201ENST00000624393 3427 ntBASIC3.25□□□□□ -1.89
TCRBV5S1A1TA0A578 AC007785.2-201ENST00000598627 1916 ntBASIC3.25□□□□□ -1.89
TCRBV5S1A1TA0A578 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
TCRBV5S1A1TA0A578 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
TCRBV5S1A1TA0A578 RNU6-50P-201ENST00000362356 103 ntBASIC3.25□□□□□ -1.89
TCRBV5S1A1TA0A578 Y_RNA.28-201ENST00000362554 111 ntBASIC3.25□□□□□ -1.89
TCRBV5S1A1TA0A578 Y_RNA.31-201ENST00000362574 102 ntBASIC3.25□□□□□ -1.89
TCRBV5S1A1TA0A578 SNORA63C-201ENST00000364578 129 ntBASIC3.25□□□□□ -1.89
TCRBV5S1A1TA0A578 SNORA22B-201ENST00000383876 138 ntBASIC3.25□□□□□ -1.89
TCRBV5S1A1TA0A578 RNU6-1040P-201ENST00000383974 107 ntBASIC3.25□□□□□ -1.89
TCRBV5S1A1TA0A578 MIR3074-201ENST00000384885 81 ntBASIC3.25□□□□□ -1.89
TCRBV5S1A1TA0A578 SNORA48.7-201ENST00000391302 135 ntBASIC3.25□□□□□ -1.89
TCRBV5S1A1TA0A578 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.25□□□□□ -1.89
TCRBV5S1A1TA0A578 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.25□□□□□ -1.89
TCRBV5S1A1TA0A578 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.25□□□□□ -1.89
TCRBV5S1A1TA0A578 PMCHL1-202ENST00000423102 261 ntBASIC3.25□□□□□ -1.89
TCRBV5S1A1TA0A578 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.25□□□□□ -1.89
TCRBV5S1A1TA0A578 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.25□□□□□ -1.89
TCRBV5S1A1TA0A578 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.25□□□□□ -1.89
TCRBV5S1A1TA0A578 RN7SL601P-201ENST00000471221 293 ntBASIC3.25□□□□□ -1.89
TCRBV5S1A1TA0A578 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.25□□□□□ -1.89
TCRBV5S1A1TA0A578 AP004242.1-201ENST00000533701 349 ntBASIC3.25□□□□□ -1.89
TCRBV5S1A1TA0A578 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.25□□□□□ -1.89
TCRBV5S1A1TA0A578 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms