Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 AC026410.2-201ENST00000460281 156 ntBASIC0.77□□□□□ -2.29
TRAV17A0A0B4J275 RNA5SP480-201ENST00000516840 109 ntBASIC0.77□□□□□ -2.29
TRAV17A0A0B4J275 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.77□□□□□ -2.29
TRAV17A0A0B4J275 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC0.77□□□□□ -2.29
TRAV17A0A0B4J275 AC104229.1-201ENST00000561364 255 ntBASIC0.77□□□□□ -2.29
TRAV17A0A0B4J275 HSPE1P19-201ENST00000603327 295 ntBASIC0.77□□□□□ -2.29
TRAV17A0A0B4J275 FAM71BP1-201ENST00000604431 523 ntBASIC0.77□□□□□ -2.29
TRAV17A0A0B4J275 AC069304.2-201ENST00000605154 435 ntBASIC0.77□□□□□ -2.29
TRAV17A0A0B4J275 MIR1264-201ENST00000616374 69 ntBASIC0.77□□□□□ -2.29
TRAV17A0A0B4J275 PVT1_3.1-201ENST00000620853 95 ntBASIC0.77□□□□□ -2.29
TRAV17A0A0B4J275 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC0.77□□□□□ -2.29
TRAV17A0A0B4J275 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC0.77□□□□□ -2.29
TRAV17A0A0B4J275 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.77□□□□□ -2.29
TRAV17A0A0B4J275 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.77□□□□□ -2.29
TRAV17A0A0B4J275 AC018630.2-201ENST00000534866 2403 ntBASIC0.77□□□□□ -2.29
TRAV17A0A0B4J275 MTND5P9-201ENST00000503854 1755 ntBASIC0.76□□□□□ -2.29
TRAV17A0A0B4J275 RNU6-17P-201ENST00000384245 107 ntBASIC0.76□□□□□ -2.29
TRAV17A0A0B4J275 RNU6-342P-201ENST00000384521 104 ntBASIC0.76□□□□□ -2.29
TRAV17A0A0B4J275 RNU6-18P-201ENST00000384527 107 ntBASIC0.76□□□□□ -2.29
TRAV17A0A0B4J275 SNORA48.1-201ENST00000390879 135 ntBASIC0.76□□□□□ -2.29
TRAV17A0A0B4J275 RNU6-575P-201ENST00000411326 105 ntBASIC0.76□□□□□ -2.29
TRAV17A0A0B4J275 RPL37P10-201ENST00000412884 288 ntBASIC0.76□□□□□ -2.29
TRAV17A0A0B4J275 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.76□□□□□ -2.29
TRAV17A0A0B4J275 MTATP6P27-201ENST00000416987 621 ntBASIC0.76□□□□□ -2.29
TRAV17A0A0B4J275 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC0.76□□□□□ -2.29
TRAV17A0A0B4J275 MTCO3P1-205ENST00000422088 832 ntBASIC0.76□□□□□ -2.29
TRAV17A0A0B4J275 AC010153.1-201ENST00000432862 727 ntBASIC0.76□□□□□ -2.29
TRAV17A0A0B4J275 USP9YP35-201ENST00000435696 412 ntBASIC0.76□□□□□ -2.29
TRAV17A0A0B4J275 MTCO2P20-201ENST00000437339 673 ntBASIC0.76□□□□□ -2.29
TRAV17A0A0B4J275 DYNLT3P2-201ENST00000442517 295 ntBASIC0.76□□□□□ -2.29
TRAV17A0A0B4J275 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.76□□□□□ -2.29
TRAV17A0A0B4J275 RPL39P29-201ENST00000447779 157 ntBASIC0.76□□□□□ -2.29
TRAV17A0A0B4J275 RPL7P43-201ENST00000478876 753 ntBASIC0.76□□□□□ -2.29
TRAV17A0A0B4J275 AC011005.2-201ENST00000487324 359 ntBASIC0.76□□□□□ -2.29
TRAV17A0A0B4J275 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC0.76□□□□□ -2.29
TRAV17A0A0B4J275 RNU6-678P-201ENST00000516832 109 ntBASIC0.76□□□□□ -2.29
TRAV17A0A0B4J275 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC0.76□□□□□ -2.29
TRAV17A0A0B4J275 AC012414.6-201ENST00000568241 401 ntBASIC0.76□□□□□ -2.29
TRAV17A0A0B4J275 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.76□□□□□ -2.29
TRAV17A0A0B4J275 SNORA77B-201ENST00000578179 125 ntBASIC0.76□□□□□ -2.29
TRAV17A0A0B4J275 MIR4666A-201ENST00000580160 79 ntBASIC0.76□□□□□ -2.29
TRAV17A0A0B4J275 AL355598.1-201ENST00000604169 202 ntBASIC0.76□□□□□ -2.29
TRAV17A0A0B4J275 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC0.76□□□□□ -2.29
TRAV17A0A0B4J275 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
TRAV17A0A0B4J275 AC010133.1-201ENST00000615809 842 ntBASIC0.76□□□□□ -2.29
TRAV17A0A0B4J275 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC0.76□□□□□ -2.29
TRAV17A0A0B4J275 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
TRAV17A0A0B4J275 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
TRAV17A0A0B4J275 UBE2Q2P1-202ENST00000354771 883 ntBASIC0.75□□□□□ -2.29
TRAV17A0A0B4J275 RNU1-58P-201ENST00000362413 163 ntBASIC0.75□□□□□ -2.29
TRAV17A0A0B4J275 Y_RNA.245-201ENST00000364493 95 ntBASIC0.75□□□□□ -2.29
TRAV17A0A0B4J275 SUGT1P1-201ENST00000379514 476 ntBASIC0.75□□□□□ -2.29
TRAV17A0A0B4J275 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
TRAV17A0A0B4J275 DNAJA1P2-201ENST00000421360 1197 ntBASIC0.75□□□□□ -2.29
TRAV17A0A0B4J275 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
TRAV17A0A0B4J275 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC0.75□□□□□ -2.29
TRAV17A0A0B4J275 RPL30P7-201ENST00000479312 323 ntBASIC0.75□□□□□ -2.29
TRAV17A0A0B4J275 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC0.75□□□□□ -2.29
TRAV17A0A0B4J275 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC0.75□□□□□ -2.29
TRAV17A0A0B4J275 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.75□□□□□ -2.29
TRAV17A0A0B4J275 AC008628.1-201ENST00000508663 265 ntBASIC0.75□□□□□ -2.29
TRAV17A0A0B4J275 RNU6-840P-201ENST00000517275 65 ntBASIC0.75□□□□□ -2.29
TRAV17A0A0B4J275 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC0.75□□□□□ -2.29
TRAV17A0A0B4J275 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.75□□□□□ -2.29
TRAV17A0A0B4J275 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC0.75□□□□□ -2.29
TRAV17A0A0B4J275 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC0.75□□□□□ -2.29
TRAV17A0A0B4J275 AL020996.3-201ENST00000606617 222 ntBASIC0.75□□□□□ -2.29
TRAV17A0A0B4J275 AL132822.1-201ENST00000617063 513 ntBASIC0.75□□□□□ -2.29
TRAV17A0A0B4J275 AL136313.1-201ENST00000624804 202 ntBASIC0.75□□□□□ -2.29
TRAV17A0A0B4J275 AC090517.3-201ENST00000625170 141 ntBASIC0.75□□□□□ -2.29
TRAV17A0A0B4J275 AL590396.4-201ENST00000636779 956 ntBASIC0.75□□□□□ -2.29
TRAV17A0A0B4J275 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.75□□□□□ -2.29
TRAV17A0A0B4J275 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
TRAV17A0A0B4J275 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
TRAV17A0A0B4J275 RNU5E-1-201ENST00000362477 120 ntBASIC0.74□□□□□ -2.29
TRAV17A0A0B4J275 SNORD115-3-201ENST00000363100 82 ntBASIC0.74□□□□□ -2.29
TRAV17A0A0B4J275 SNORD114-2-201ENST00000363953 78 ntBASIC0.74□□□□□ -2.29
TRAV17A0A0B4J275 RNU1-133P-201ENST00000364867 167 ntBASIC0.74□□□□□ -2.29
TRAV17A0A0B4J275 RNU6-611P-201ENST00000384276 104 ntBASIC0.74□□□□□ -2.29
TRAV17A0A0B4J275 SNORD14D-201ENST00000384390 87 ntBASIC0.74□□□□□ -2.29
TRAV17A0A0B4J275 MIR506-201ENST00000384998 124 ntBASIC0.74□□□□□ -2.29
TRAV17A0A0B4J275 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.74□□□□□ -2.29
TRAV17A0A0B4J275 RPS27P16-201ENST00000425758 201 ntBASIC0.74□□□□□ -2.29
TRAV17A0A0B4J275 CR769776.1-201ENST00000441254 787 ntBASIC0.74□□□□□ -2.29
TRAV17A0A0B4J275 GTF2IP12-201ENST00000456547 356 ntBASIC0.74□□□□□ -2.29
TRAV17A0A0B4J275 snoU13.9-201ENST00000458927 103 ntBASIC0.74□□□□□ -2.29
TRAV17A0A0B4J275 MEMO1P3-201ENST00000459811 302 ntBASIC0.74□□□□□ -2.29
TRAV17A0A0B4J275 AC112771.1-201ENST00000463581 102 ntBASIC0.74□□□□□ -2.29
TRAV17A0A0B4J275 RPS26P55-201ENST00000471178 356 ntBASIC0.74□□□□□ -2.29
TRAV17A0A0B4J275 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC0.74□□□□□ -2.29
TRAV17A0A0B4J275 AC010460.2-201ENST00000509054 677 ntBASIC0.74□□□□□ -2.29
TRAV17A0A0B4J275 RNU6-927P-201ENST00000516199 100 ntBASIC0.74□□□□□ -2.29
TRAV17A0A0B4J275 Y_RNA.670-201ENST00000516255 105 ntBASIC0.74□□□□□ -2.29
TRAV17A0A0B4J275 MRPS36P5-201ENST00000551909 298 ntBASIC0.74□□□□□ -2.29
TRAV17A0A0B4J275 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC0.74□□□□□ -2.29
TRAV17A0A0B4J275 CLIC4P2-201ENST00000601934 717 ntBASIC0.74□□□□□ -2.29
TRAV17A0A0B4J275 HAUS6P2-201ENST00000433254 2404 ntBASIC0.74□□□□□ -2.29
TRAV17A0A0B4J275 RBBP8P1-201ENST00000449447 1844 ntBASIC0.73□□□□□ -2.29
TRAV17A0A0B4J275 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC0.73□□□□□ -2.29
TRAV17A0A0B4J275 RNU6-1187P-201ENST00000364771 110 ntBASIC0.73□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms